RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 PLEKHG3A1L390 1219 aa15.15■□□□□ 0.02
CLUHP3-201ENST00000254109 CADPS2Q86UW7 1296 aa15.15■□□□□ 0.02
CLUHP3-201ENST00000254109 ACEP12821 1306 aa15.15■□□□□ 0.02
CLUHP3-201ENST00000254109 DCCP43146 1447 aa15.15■□□□□ 0.02
CLUHP3-201ENST00000254109 MST1RQ04912 1400 aa15.15■□□□□ 0.02
CLUHP3-201ENST00000254109 C1orf167Q5SNV9 1468 aa15.14■□□□□ 0.01
CLUHP3-201ENST00000254109 RNF123Q5XPI4 1314 aa15.14■□□□□ 0.01
CLUHP3-201ENST00000254109 HDGFL2Q7Z4V5 671 aaPredicted RBP15.14■□□□□ 0.01
CLUHP3-201ENST00000254109 TERF2IPQ9NYB0 399 aa15.14■□□□□ 0.01
CLUHP3-201ENST00000254109 NSD3Q9BZ95 1437 aa15.13■□□□□ 0.01
CLUHP3-201ENST00000254109 CPSF1Q10570 1443 aaKnown RBP15.13■□□□□ 0.01
CLUHP3-201ENST00000254109 WDR43Q15061 677 aaKnown RBP eCLIP15.13■□□□□ 0.01
CLUHP3-201ENST00000254109 PHF8Q9UPP1 1060 aa15.13■□□□□ 0.01
CLUHP3-201ENST00000254109 AKAP12Q02952 1782 aa15.12■□□□□ 0.01
CLUHP3-201ENST00000254109 NGDNQ8NEJ9 315 aaKnown RBP15.12■□□□□ 0.01
CLUHP3-201ENST00000254109 SALL2Q9Y467 1007 aaPredicted RBP15.11■□□□□ 0.01
CLUHP3-201ENST00000254109 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.1■□□□□ 0.01
CLUHP3-201ENST00000254109 SLAIN2Q9P270 581 aa15.1■□□□□ 0.01
CLUHP3-201ENST00000254109 POLR3AO14802 1390 aaPredicted RBP15.09■□□□□ 0.01
CLUHP3-201ENST00000254109 MON2Q7Z3U7 1717 aa15.09■□□□□ 0.01
CLUHP3-201ENST00000254109 FOXO3O43524 673 aa15.09■□□□□ 0.01
CLUHP3-201ENST00000254109 DDX17Q92841 729 aaKnown RBP15.08■□□□□ 0.01
CLUHP3-201ENST00000254109 ZNF692Q9BU19 519 aaPredicted RBP15.08■□□□□ 0.01
CLUHP3-201ENST00000254109 ADAMTS8Q9UP79 889 aa15.08■□□□□ 0.01
CLUHP3-201ENST00000254109 USP6P35125 1406 aa15.08■□□□□ 0
CLUHP3-201ENST00000254109 XPCQ01831 940 aaPredicted RBP15.08■□□□□ 0
CLUHP3-201ENST00000254109 B4GALNT3Q6L9W6 998 aa15.07■□□□□ 0
CLUHP3-201ENST00000254109 RCAN3Q9UKA8 241 aa15.07■□□□□ 0
CLUHP3-201ENST00000254109 EDC4Q6P2E9 1401 aaKnown RBP15.06■□□□□ 0
CLUHP3-201ENST00000254109 BRINP3Q76B58 766 aa15.06■□□□□ 0
CLUHP3-201ENST00000254109 CGNL1Q0VF96 1302 aa15.06■□□□□ 0
CLUHP3-201ENST00000254109 FYB1O15117 783 aa15.06■□□□□ 0
CLUHP3-201ENST00000254109 PSME1Q06323 249 aa15.06■□□□□ 0
CLUHP3-201ENST00000254109 GGNBP2Q9H3C7 697 aa15.06■□□□□ 0
CLUHP3-201ENST00000254109 ZRANB1Q9UGI0 708 aa15.06■□□□□ 0
CLUHP3-201ENST00000254109 KIF1AQ12756 1690 aa15.05■□□□□ -0
CLUHP3-201ENST00000254109 NRKQ7Z2Y5 1582 aa15.05■□□□□ -0
CLUHP3-201ENST00000254109 NME9Q86XW9 330 aa15.05■□□□□ -0
CLUHP3-201ENST00000254109 TTC21BQ7Z4L5 1316 aa15.05■□□□□ -0
CLUHP3-201ENST00000254109 SSH2Q76I76 1423 aa15.04■□□□□ -0
CLUHP3-201ENST00000254109 KIF20BQ96Q89 1820 aa15.04■□□□□ -0
CLUHP3-201ENST00000254109 PAK3O75914 559 aaPredicted RBP15.03■□□□□ -0
CLUHP3-201ENST00000254109 RRP1P56182 461 aaKnown RBP15.03■□□□□ -0
CLUHP3-201ENST00000254109 CERKQ8TCT0 537 aa15.03■□□□□ -0
CLUHP3-201ENST00000254109 KRT28Q7Z3Y7 464 aa15.02■□□□□ -0
CLUHP3-201ENST00000254109 CDCA7LQ96GN5 454 aa15.02■□□□□ -0
CLUHP3-201ENST00000254109 TNNT2P45379 298 aaPredicted RBP15.01□□□□□ -0.01
CLUHP3-201ENST00000254109 CCDC136Q96JN2 1154 aa15.01□□□□□ -0.01
CLUHP3-201ENST00000254109 RBM19Q9Y4C8 960 aaKnown RBP15.01□□□□□ -0.01
CLUHP3-201ENST00000254109 NUTM2GQ5VZR2 741 aa15.01□□□□□ -0.01
CLUHP3-201ENST00000254109 MORC1Q86VD1 984 aa15.01□□□□□ -0.01
CLUHP3-201ENST00000254109 TOM1O60784 492 aa14.99□□□□□ -0.01
CLUHP3-201ENST00000254109 PIP4K2BP78356 416 aa14.99□□□□□ -0.01
CLUHP3-201ENST00000254109 NPHP3Q7Z494 1330 aa14.99□□□□□ -0.01
CLUHP3-201ENST00000254109 ROBO1Q9Y6N7 1651 aa14.99□□□□□ -0.01
CLUHP3-201ENST00000254109 TRPM3Q9HCF6 1732 aaPredicted RBP14.99□□□□□ -0.01
CLUHP3-201ENST00000254109 PIK3C2AO00443 1686 aa14.99□□□□□ -0.01
CLUHP3-201ENST00000254109 UBAP1LF5GYI3 381 aa14.99□□□□□ -0.01
CLUHP3-201ENST00000254109 ABTB2Q8N961 1025 aa14.99□□□□□ -0.01
CLUHP3-201ENST00000254109 ANKRD26Q9UPS8 1709 aa14.99□□□□□ -0.01
CLUHP3-201ENST00000254109 TTC21AQ8NDW8 1320 aa14.98□□□□□ -0.01
CLUHP3-201ENST00000254109 NSD2O96028 1365 aa14.98□□□□□ -0.01
CLUHP3-201ENST00000254109 FBLN1P23142 703 aa14.98□□□□□ -0.01
CLUHP3-201ENST00000254109 PLEKHG5O94827 1062 aa14.97□□□□□ -0.01
CLUHP3-201ENST00000254109 LMOD2Q6P5Q4 547 aa14.97□□□□□ -0.01
CLUHP3-201ENST00000254109 PXDNQ92626 1479 aa14.97□□□□□ -0.01
CLUHP3-201ENST00000254109 NLRP6P59044 892 aa14.96□□□□□ -0.01
CLUHP3-201ENST00000254109 GOLGA2Q08379 1002 aa14.96□□□□□ -0.01
CLUHP3-201ENST00000254109 NGEFQ8N5V2 710 aa14.96□□□□□ -0.01
CLUHP3-201ENST00000254109 COG3Q96JB2 828 aa14.96□□□□□ -0.01
CLUHP3-201ENST00000254109 IQSEC2Q5JU85 1478 aa14.96□□□□□ -0.01
CLUHP3-201ENST00000254109 MARF1Q9Y4F3 1742 aaKnown RBP14.95□□□□□ -0.02
CLUHP3-201ENST00000254109 NHSL1Q5SYE7 1610 aa14.95□□□□□ -0.02
CLUHP3-201ENST00000254109 OVOS2A0A0J9YW53 1432 aa14.95□□□□□ -0.02
CLUHP3-201ENST00000254109 OVOS2Q6IE36 1432 aa14.95□□□□□ -0.02
CLUHP3-201ENST00000254109 SOS2Q07890 1332 aaPredicted RBP14.94□□□□□ -0.02
CLUHP3-201ENST00000254109 ZNF521Q96K83 1311 aa14.94□□□□□ -0.02
CLUHP3-201ENST00000254109 SOX12O15370 315 aa14.94□□□□□ -0.02
CLUHP3-201ENST00000254109 CCDC146Q8IYE0 955 aa14.94□□□□□ -0.02
CLUHP3-201ENST00000254109 CFAP53Q96M91 514 aa14.94□□□□□ -0.02
CLUHP3-201ENST00000254109 ALS2Q96Q42 1657 aa14.93□□□□□ -0.02
CLUHP3-201ENST00000254109 USP31Q70CQ4 1352 aa14.93□□□□□ -0.02
CLUHP3-201ENST00000254109 SBNO1A3KN83 1393 aa14.93□□□□□ -0.02
CLUHP3-201ENST00000254109 SPATA31A3Q5VYP0 1347 aa14.92□□□□□ -0.02
CLUHP3-201ENST00000254109 APAF1O14727 1248 aa14.92□□□□□ -0.02
CLUHP3-201ENST00000254109 MAP2P11137 1827 aaKnown RBP14.92□□□□□ -0.02
CLUHP3-201ENST00000254109 EXOC6Q8TAG9 804 aa14.92□□□□□ -0.02
CLUHP3-201ENST00000254109 DUSP27Q5VZP5 1158 aa14.91□□□□□ -0.02
CLUHP3-201ENST00000254109 TNS3Q68CZ2 1445 aa14.91□□□□□ -0.02
CLUHP3-201ENST00000254109 MTHFSP49914 203 aa14.9□□□□□ -0.02
CLUHP3-201ENST00000254109 SLFN5Q08AF3 891 aa14.9□□□□□ -0.02
CLUHP3-201ENST00000254109 RRS1Q15050 365 aaKnown RBP14.9□□□□□ -0.02
CLUHP3-201ENST00000254109 AHDC1Q5TGY3 1603 aaPredicted RBP14.9□□□□□ -0.02
CLUHP3-201ENST00000254109 USP54Q70EL1 1684 aa14.9□□□□□ -0.02
CLUHP3-201ENST00000254109 CABLES1Q8TDN4 633 aa14.89□□□□□ -0.03
CLUHP3-201ENST00000254109 POLKQ9UBT6 870 aa14.89□□□□□ -0.03
CLUHP3-201ENST00000254109 PPM1GO15355 546 aaPredicted RBP14.89□□□□□ -0.03
CLUHP3-201ENST00000254109 EMILIN1Q9Y6C2 1016 aa14.89□□□□□ -0.03
CLUHP3-201ENST00000254109 PHLPP1O60346 1717 aa14.89□□□□□ -0.03
CLUHP3-201ENST00000254109 E9PSI1 815 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms