RNA–Protein interactions for RNA: ENST00000253251.12

UBE4B-201, Transcript of ubiquitination factor E4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE4B, Length 4,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-201ENST00000253251 INTS3Q68E01 1043 aaKnown RBP18.41■□□□□ 0.54
UBE4B-201ENST00000253251 TMPOP42166 694 aaKnown RBP18.4■□□□□ 0.54
UBE4B-201ENST00000253251 GCC1Q96CN9 775 aa18.4■□□□□ 0.54
UBE4B-201ENST00000253251 LRPPRCP42704 1394 aaKnown RBP18.4■□□□□ 0.54
UBE4B-201ENST00000253251 NEO1Q92859 1461 aa18.4■□□□□ 0.54
UBE4B-201ENST00000253251 ZKSCAN1P17029 563 aaPredicted RBP18.4■□□□□ 0.54
UBE4B-201ENST00000253251 TAOK2Q9UL54 1235 aa18.39■□□□□ 0.54
UBE4B-201ENST00000253251 PRDM11Q9NQV5 511 aa18.39■□□□□ 0.53
UBE4B-201ENST00000253251 SLFN5Q08AF3 891 aa18.39■□□□□ 0.53
UBE4B-201ENST00000253251 DMRT2Q9Y5R5 561 aa18.38■□□□□ 0.53
UBE4B-201ENST00000253251 HDGFL1Q5TGJ6 251 aa18.38■□□□□ 0.53
UBE4B-201ENST00000253251 ATP7AQ04656 1500 aa18.38■□□□□ 0.53
UBE4B-201ENST00000253251 RIMS2Q9UQ26 1411 aa18.38■□□□□ 0.53
UBE4B-201ENST00000253251 HMGB2P26583 209 aaKnown RBP18.38■□□□□ 0.53
UBE4B-201ENST00000253251 CEBPAP49715 358 aaPredicted RBP18.38■□□□□ 0.53
UBE4B-201ENST00000253251 TTC21BQ7Z4L5 1316 aa18.38■□□□□ 0.53
UBE4B-201ENST00000253251 RRS1Q15050 365 aaKnown RBP18.38■□□□□ 0.53
UBE4B-201ENST00000253251 RNF20Q5VTR2 975 aa18.38■□□□□ 0.53
UBE4B-201ENST00000253251 ISY1Q9ULR0 285 aaKnown RBP18.37■□□□□ 0.53
UBE4B-201ENST00000253251 PLCB2Q00722 1185 aa18.37■□□□□ 0.53
UBE4B-201ENST00000253251 TOM1L2Q6ZVM7 507 aa18.37■□□□□ 0.53
UBE4B-201ENST00000253251 ATP6V1DQ9Y5K8 247 aa18.37■□□□□ 0.53
UBE4B-201ENST00000253251 ATF7IPQ6VMQ6 1270 aa18.37■□□□□ 0.53
UBE4B-201ENST00000253251 DISP3Q9P2K9 1392 aa18.36■□□□□ 0.53
UBE4B-201ENST00000253251 ERC1Q8IUD2 1116 aa18.36■□□□□ 0.53
UBE4B-201ENST00000253251 PZPP20742 1482 aa18.36■□□□□ 0.53
UBE4B-201ENST00000253251 ARHGEF5Q12774 1597 aa18.36■□□□□ 0.53
UBE4B-201ENST00000253251 USP35Q9P2H5 1018 aa18.35■□□□□ 0.53
UBE4B-201ENST00000253251 GNAI2P04899 355 aa18.35■□□□□ 0.53
UBE4B-201ENST00000253251 CABP4P57796 275 aa18.35■□□□□ 0.53
UBE4B-201ENST00000253251 AMOTQ4VCS5 1084 aa18.35■□□□□ 0.53
UBE4B-201ENST00000253251 FANCIQ9NVI1 1328 aa18.35■□□□□ 0.53
UBE4B-201ENST00000253251 ATP10AO60312 1499 aa18.35■□□□□ 0.53
UBE4B-201ENST00000253251 CCDC184Q52MB2 194 aa18.35■□□□□ 0.53
UBE4B-201ENST00000253251 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
UBE4B-201ENST00000253251 ABCA8O94911 1581 aa18.35■□□□□ 0.53
UBE4B-201ENST00000253251 GNAT3A8MTJ3 354 aa18.34■□□□□ 0.53
UBE4B-201ENST00000253251 NOB1Q9ULX3 412 aaKnown RBP18.34■□□□□ 0.53
UBE4B-201ENST00000253251 DDX11L8A8MPP1 907 aa18.34■□□□□ 0.53
UBE4B-201ENST00000253251 AIMP1Q12904 312 aaKnown RBP18.34■□□□□ 0.53
UBE4B-201ENST00000253251 LNPKQ9C0E8 428 aa18.34■□□□□ 0.53
UBE4B-201ENST00000253251 IFT57Q9NWB7 429 aa18.34■□□□□ 0.53
UBE4B-201ENST00000253251 MAST1Q9Y2H9 1570 aa18.34■□□□□ 0.53
UBE4B-201ENST00000253251 CDC45O75419 566 aa18.34■□□□□ 0.53
UBE4B-201ENST00000253251 CPLX2Q6PUV4 134 aaKnown RBP18.34■□□□□ 0.53
UBE4B-201ENST00000253251 CLASRPQ8N2M8 674 aaKnown RBP18.34■□□□□ 0.53
UBE4B-201ENST00000253251 NOL10Q9BSC4 688 aaKnown RBP18.34■□□□□ 0.53
UBE4B-201ENST00000253251 TTC21AQ8NDW8 1320 aa18.34■□□□□ 0.53
UBE4B-201ENST00000253251 SLC4A2P04920 1241 aa18.33■□□□□ 0.53
UBE4B-201ENST00000253251 KIF6Q6ZMV9 814 aa18.33■□□□□ 0.53
UBE4B-201ENST00000253251 DNTTIP2Q5QJE6 756 aaKnown RBP18.33■□□□□ 0.52
UBE4B-201ENST00000253251 NME9Q86XW9 330 aa18.33■□□□□ 0.52
UBE4B-201ENST00000253251 STRN4Q9NRL3 753 aa18.33■□□□□ 0.52
UBE4B-201ENST00000253251 CFAP74Q9C0B2 1584 aa18.32■□□□□ 0.52
UBE4B-201ENST00000253251 AMOTL1Q8IY63 956 aa18.32■□□□□ 0.52
UBE4B-201ENST00000253251 MVPQ14764 893 aaKnown RBP18.32■□□□□ 0.52
UBE4B-201ENST00000253251 UHRF1BP1Q6BDS2 1440 aa18.31■□□□□ 0.52
UBE4B-201ENST00000253251 ALDH1L2Q3SY69 923 aa18.31■□□□□ 0.52
UBE4B-201ENST00000253251 TOMM22Q9NS69 142 aa18.31■□□□□ 0.52
UBE4B-201ENST00000253251 SRCIN1Q9C0H9 1055 aa18.31■□□□□ 0.52
UBE4B-201ENST00000253251 PHF14O94880 888 aa18.3■□□□□ 0.52
UBE4B-201ENST00000253251 CADPS2Q86UW7 1296 aa18.3■□□□□ 0.52
UBE4B-201ENST00000253251 ASXL1Q8IXJ9 1541 aa18.3■□□□□ 0.52
UBE4B-201ENST00000253251 SYNE3Q6ZMZ3 975 aa18.3■□□□□ 0.52
UBE4B-201ENST00000253251 HIP1O00291 1037 aa18.29■□□□□ 0.52
UBE4B-201ENST00000253251 BCAR3O75815 825 aa18.29■□□□□ 0.52
UBE4B-201ENST00000253251 SKOR2Q2VWA4 1001 aaPredicted RBP18.28■□□□□ 0.52
UBE4B-201ENST00000253251 VPS37DQ86XT2 251 aa18.28■□□□□ 0.52
UBE4B-201ENST00000253251 SURF6O75683 361 aaKnown RBP18.27■□□□□ 0.52
UBE4B-201ENST00000253251 TPM4P67936 248 aa18.27■□□□□ 0.52
UBE4B-201ENST00000253251 CNTROBQ8N137 903 aa18.27■□□□□ 0.52
UBE4B-201ENST00000253251 ZMYM3Q14202 1370 aa18.27■□□□□ 0.52
UBE4B-201ENST00000253251 ANO2Q9NQ90 1003 aa18.27■□□□□ 0.52
UBE4B-201ENST00000253251 IL16Q14005 1332 aa18.27■□□□□ 0.52
UBE4B-201ENST00000253251 MSH5O43196 834 aa18.27■□□□□ 0.51
UBE4B-201ENST00000253251 FAM184AQ8NB25 1140 aa18.27■□□□□ 0.51
UBE4B-201ENST00000253251 BTBD11A6QL63 1104 aa18.26■□□□□ 0.51
UBE4B-201ENST00000253251 RPAP2Q8IXW5 612 aaPredicted RBP18.26■□□□□ 0.51
UBE4B-201ENST00000253251 NKTRP30414 1462 aaKnown RBP18.26■□□□□ 0.51
UBE4B-201ENST00000253251 TRDNQ13061 729 aa18.26■□□□□ 0.51
UBE4B-201ENST00000253251 GLIPR1L2Q4G1C9 344 aa18.26■□□□□ 0.51
UBE4B-201ENST00000253251 ACEP12821 1306 aa18.26■□□□□ 0.51
UBE4B-201ENST00000253251 ADGBQ8N7X0 1667 aa18.25■□□□□ 0.51
UBE4B-201ENST00000253251 C22orf23Q9BZE7 217 aa18.25■□□□□ 0.51
UBE4B-201ENST00000253251 RBM42Q9BTD8 480 aaKnown RBP18.25■□□□□ 0.51
UBE4B-201ENST00000253251 PDZRN3Q9UPQ7 1066 aa18.25■□□□□ 0.51
UBE4B-201ENST00000253251 NOL8Q76FK4 1167 aaKnown RBP18.25■□□□□ 0.51
UBE4B-201ENST00000253251 H3BQV1 296 aa18.24■□□□□ 0.51
UBE4B-201ENST00000253251 ZC3H6P61129 1189 aaKnown RBP18.24■□□□□ 0.51
UBE4B-201ENST00000253251 AKAP17AQ02040 695 aaKnown RBP18.24■□□□□ 0.51
UBE4B-201ENST00000253251 IFFO2Q5TF58 517 aa18.24■□□□□ 0.51
UBE4B-201ENST00000253251 EMILIN1Q9Y6C2 1016 aa18.24■□□□□ 0.51
UBE4B-201ENST00000253251 TAF7Q15545 349 aaPredicted RBP18.24■□□□□ 0.51
UBE4B-201ENST00000253251 MAGI3Q5TCQ9 1506 aa18.24■□□□□ 0.51
UBE4B-201ENST00000253251 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.23■□□□□ 0.518e-7■■□□□ 13.9
UBE4B-201ENST00000253251 GCC2Q8IWJ2 1684 aa18.23■□□□□ 0.51
UBE4B-201ENST00000253251 TBX22Q9Y458 520 aa18.23■□□□□ 0.51
UBE4B-201ENST00000253251 MSNP26038 577 aaKnown RBP18.23■□□□□ 0.51
UBE4B-201ENST00000253251 AMER1Q5JTC6 1135 aaPredicted RBP18.23■□□□□ 0.51
UBE4B-201ENST00000253251 CHMP5Q9NZZ3 219 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms