RNA–Protein interactions for RNA: ENST00000252486.8

APOE-201, Transcript of apolipoprotein E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOE, Length 1,208 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-201ENST00000252486 TNS3Q68CZ2 1445 aa31.53■■■□□ 2.64
APOE-201ENST00000252486 SPATA31A3Q5VYP0 1347 aa31.52■■■□□ 2.64
APOE-201ENST00000252486 JCADQ9P266 1359 aa31.51■■■□□ 2.63
APOE-201ENST00000252486 EDC4Q6P2E9 1401 aaKnown RBP31.5■■■□□ 2.63
APOE-201ENST00000252486 PAK3O75914 559 aaPredicted RBP31.5■■■□□ 2.63
APOE-201ENST00000252486 ARHGEF10O15013 1369 aa31.5■■■□□ 2.63
APOE-201ENST00000252486 SSH2Q76I76 1423 aa31.49■■■□□ 2.63
APOE-201ENST00000252486 TTC21AQ8NDW8 1320 aa31.49■■■□□ 2.63
APOE-201ENST00000252486 NRKQ7Z2Y5 1582 aa31.47■■■□□ 2.63
APOE-201ENST00000252486 TTC21BQ7Z4L5 1316 aa31.47■■■□□ 2.63
APOE-201ENST00000252486 SHPRHQ149N8 1683 aa31.46■■■□□ 2.63
APOE-201ENST00000252486 ALS2Q96Q42 1657 aa31.46■■■□□ 2.63
APOE-201ENST00000252486 PNPLA6Q8IY17 1366 aa31.44■■■□□ 2.62
APOE-201ENST00000252486 LMOD2Q6P5Q4 547 aa31.43■■■□□ 2.62
APOE-201ENST00000252486 PANK3Q9H999 370 aa31.42■■■□□ 2.62
APOE-201ENST00000252486 ZNF316A6NFI3 1004 aaPredicted RBP31.41■■■□□ 2.62
APOE-201ENST00000252486 ABTB2Q8N961 1025 aa31.41■■■□□ 2.62
APOE-201ENST00000252486 COL22A1Q8NFW1 1626 aaPredicted RBP31.41■■■□□ 2.62
APOE-201ENST00000252486 SPATA31A6Q5VVP1 1343 aa31.39■■■□□ 2.62
APOE-201ENST00000252486 SUGP2Q8IX01 1082 aaKnown RBP eCLIP31.38■■■□□ 2.61
APOE-201ENST00000252486 CARD14Q9BXL6 1004 aa31.38■■■□□ 2.61
APOE-201ENST00000252486 NSD3Q9BZ95 1437 aa31.38■■■□□ 2.61
APOE-201ENST00000252486 NLRP13Q86W25 1043 aa31.37■■■□□ 2.61
APOE-201ENST00000252486 MED1Q15648 1581 aaPredicted RBP31.36■■■□□ 2.61
APOE-201ENST00000252486 PIK3C2AO00443 1686 aa31.35■■■□□ 2.61
APOE-201ENST00000252486 USP31Q70CQ4 1352 aa31.33■■■□□ 2.61
APOE-201ENST00000252486 NLRP6P59044 892 aa31.33■■■□□ 2.61
APOE-201ENST00000252486 CGNL1Q0VF96 1302 aa31.32■■■□□ 2.6
APOE-201ENST00000252486 KNSTRNQ9Y448 316 aa31.32■■■□□ 2.6
APOE-201ENST00000252486 USP54Q70EL1 1684 aa31.3■■■□□ 2.6
APOE-201ENST00000252486 NME9Q86XW9 330 aa31.3■■■□□ 2.6
APOE-201ENST00000252486 USP19O94966 1318 aa31.29■■■□□ 2.6
APOE-201ENST00000252486 NUTM2GQ5VZR2 741 aa31.29■■■□□ 2.6
APOE-201ENST00000252486 KIF20BQ96Q89 1820 aa31.28■■■□□ 2.6
APOE-201ENST00000252486 FYB1O15117 783 aa31.27■■■□□ 2.6
APOE-201ENST00000252486 HAP1P54257 671 aaPredicted RBP31.27■■■□□ 2.6
APOE-201ENST00000252486 NSD2O96028 1365 aa31.26■■■□□ 2.59
APOE-201ENST00000252486 ABCA3Q99758 1704 aa31.25■■■□□ 2.59
APOE-201ENST00000252486 CRYBG1Q9Y4K1 1723 aa31.25■■■□□ 2.59
APOE-201ENST00000252486 PER1O15534 1290 aaPredicted RBP31.25■■■□□ 2.59
APOE-201ENST00000252486 COG3Q96JB2 828 aa31.25■■■□□ 2.59
APOE-201ENST00000252486 OVOS2A0A0J9YW53 1432 aa31.24■■■□□ 2.59
APOE-201ENST00000252486 OVOS2Q6IE36 1432 aa31.24■■■□□ 2.59
APOE-201ENST00000252486 PHRF1Q9P1Y6 1649 aaKnown RBP31.24■■■□□ 2.59
APOE-201ENST00000252486 SLIT3O75094 1523 aa31.24■■■□□ 2.59
APOE-201ENST00000252486 NUTM2BA6NNL0 878 aaPredicted RBP31.23■■■□□ 2.59
APOE-201ENST00000252486 NUTM2EB1AL46 878 aaPredicted RBP31.23■■■□□ 2.59
APOE-201ENST00000252486 NUTM2AQ8IVF1 878 aaPredicted RBP31.23■■■□□ 2.59
APOE-201ENST00000252486 KCNH5Q8NCM2 988 aa31.23■■■□□ 2.59
APOE-201ENST00000252486 CABLES1Q8TDN4 633 aa31.23■■■□□ 2.59
APOE-201ENST00000252486 MARF1Q9Y4F3 1742 aaKnown RBP31.21■■■□□ 2.59
APOE-201ENST00000252486 DDX10Q13206 875 aaKnown RBP31.21■■■□□ 2.59
APOE-201ENST00000252486 GGNBP2Q9H3C7 697 aa31.21■■■□□ 2.59
APOE-201ENST00000252486 ZRANB1Q9UGI0 708 aa31.21■■■□□ 2.59
APOE-201ENST00000252486 PLEKHG5O94827 1062 aa31.2■■■□□ 2.59
APOE-201ENST00000252486 GCP02774 474 aa31.2■■■□□ 2.59
APOE-201ENST00000252486 NPC1L1Q9UHC9 1359 aa31.19■■■□□ 2.58
APOE-201ENST00000252486 AMER1Q5JTC6 1135 aaPredicted RBP31.18■■■□□ 2.58
APOE-201ENST00000252486 ANKRD26Q9UPS8 1709 aa31.18■■■□□ 2.58
APOE-201ENST00000252486 LRP6O75581 1613 aa31.17■■■□□ 2.58
APOE-201ENST00000252486 MEX3CQ5U5Q3 659 aaKnown RBP31.15■■■□□ 2.58
APOE-201ENST00000252486 CPDO75976 1380 aa31.14■■■□□ 2.58
APOE-201ENST00000252486 ADAMTS2O95450 1211 aa31.13■■■□□ 2.57
APOE-201ENST00000252486 NFAT5O94916 1531 aa31.12■■■□□ 2.57
APOE-201ENST00000252486 ZC3H6P61129 1189 aaKnown RBP31.09■■■□□ 2.57
APOE-201ENST00000252486 MORC1Q86VD1 984 aa31.09■■■□□ 2.57
APOE-201ENST00000252486 KIAA0232Q92628 1395 aa31.08■■■□□ 2.57
APOE-201ENST00000252486 SOX12O15370 315 aa31.08■■■□□ 2.57
APOE-201ENST00000252486 PRDM11Q9NQV5 511 aa31.08■■■□□ 2.57
APOE-201ENST00000252486 ARHGEF25Q86VW2 580 aa31.06■■■□□ 2.56
APOE-201ENST00000252486 COL14A1Q05707 1796 aaKnown RBP31.05■■■□□ 2.56
APOE-201ENST00000252486 CC2D1BQ5T0F9 858 aaKnown RBP31.05■■■□□ 2.56
APOE-201ENST00000252486 C8orf37Q96NL8 207 aa31.05■■■□□ 2.56
APOE-201ENST00000252486 AATKQ6ZMQ8 1374 aa31.05■■■□□ 2.56
APOE-201ENST00000252486 NGLY1Q96IV0 654 aa31.04■■■□□ 2.56
APOE-201ENST00000252486 FAM83GA6ND36 823 aa31.03■■■□□ 2.56
APOE-201ENST00000252486 ABCC6O95255 1503 aa31.03■■■□□ 2.56
APOE-201ENST00000252486 FNBP4Q8N3X1 1017 aaPredicted RBP30.99■■■□□ 2.55
APOE-201ENST00000252486 KIF24Q5T7B8 1368 aa30.99■■■□□ 2.55
APOE-201ENST00000252486 LTN1O94822 1766 aa30.99■■■□□ 2.55
APOE-201ENST00000252486 NWD2Q9ULI1 1742 aa30.98■■■□□ 2.55
APOE-201ENST00000252486 ZBTB7CA1YPR0 619 aa30.98■■■□□ 2.55
APOE-201ENST00000252486 CHRNA2Q15822 529 aa30.98■■■□□ 2.55
APOE-201ENST00000252486 SLIT2O94813 1529 aa30.98■■■□□ 2.55
APOE-201ENST00000252486 MAP3K19Q56UN5 1328 aa30.98■■■□□ 2.55
APOE-201ENST00000252486 PLCH1Q4KWH8 1693 aa30.97■■■□□ 2.55
APOE-201ENST00000252486 RTL1A6NKG5 1358 aa30.96■■■□□ 2.55
APOE-201ENST00000252486 TNNT2P45379 298 aaPredicted RBP30.96■■■□□ 2.55
APOE-201ENST00000252486 LMO7Q8WWI1 1683 aa30.96■■■□□ 2.55
APOE-201ENST00000252486 AFF2P51816 1311 aa30.96■■■□□ 2.55
APOE-201ENST00000252486 AMPHP49418 695 aa30.95■■■□□ 2.55
APOE-201ENST00000252486 COL18A1P39060 1754 aa30.94■■■□□ 2.54
APOE-201ENST00000252486 CNGB1Q14028 1251 aaPredicted RBP30.94■■■□□ 2.54
APOE-201ENST00000252486 RRS1Q15050 365 aaKnown RBP30.94■■■□□ 2.54
APOE-201ENST00000252486 PHF23Q9BUL5 403 aaPredicted RBP30.94■■■□□ 2.54
APOE-201ENST00000252486 FBLN1P23142 703 aa30.93■■■□□ 2.54
APOE-201ENST00000252486 IP6K1Q92551 441 aa30.93■■■□□ 2.54
APOE-201ENST00000252486 BTG4Q9NY30 223 aa30.93■■■□□ 2.54
APOE-201ENST00000252486 MAP2P11137 1827 aaKnown RBP30.93■■■□□ 2.54
APOE-201ENST00000252486 POLKQ9UBT6 870 aa30.92■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms