RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 C3P01024 1663 aa32.75■■■□□ 2.83
TMEM55B-201ENST00000250489 CEBPAP49715 358 aaPredicted RBP32.74■■■□□ 2.83
TMEM55B-201ENST00000250489 NUDT16Q96DE0 195 aaKnown RBP32.74■■■□□ 2.83
TMEM55B-201ENST00000250489 KDM2BQ8NHM5 1336 aa32.73■■■□□ 2.83
TMEM55B-201ENST00000250489 DIAPH1O60610 1272 aaKnown RBP32.73■■■□□ 2.83
TMEM55B-201ENST00000250489 LTKP29376 864 aa32.73■■■□□ 2.83
TMEM55B-201ENST00000250489 ROBO2Q9HCK4 1378 aa32.73■■■□□ 2.83
TMEM55B-201ENST00000250489 MON2Q7Z3U7 1717 aa32.71■■■□□ 2.83
TMEM55B-201ENST00000250489 CCDC61Q9Y6R9 512 aa32.7■■■□□ 2.83
TMEM55B-201ENST00000250489 MYH16Q9H6N6 1097 aa32.69■■■□□ 2.82
TMEM55B-201ENST00000250489 ANP32EQ9BTT0 268 aa32.68■■■□□ 2.82
TMEM55B-201ENST00000250489 POLKQ9UBT6 870 aa32.68■■■□□ 2.82
TMEM55B-201ENST00000250489 FER1L4A9Z1Z3 1794 aa32.68■■■□□ 2.82
TMEM55B-201ENST00000250489 AKAP12Q02952 1782 aa32.68■■■□□ 2.82
TMEM55B-201ENST00000250489 MAPK8IP3Q9UPT6 1336 aa32.68■■■□□ 2.82
TMEM55B-201ENST00000250489 TMPOP42166 694 aaKnown RBP32.67■■■□□ 2.82
TMEM55B-201ENST00000250489 PDE3AQ14432 1141 aa32.67■■■□□ 2.82
TMEM55B-201ENST00000250489 MS4A1P11836 297 aa32.67■■■□□ 2.82
TMEM55B-201ENST00000250489 SLIT1O75093 1534 aa32.67■■■□□ 2.82
TMEM55B-201ENST00000250489 NCKAP5LQ9HCH0 1330 aa32.66■■■□□ 2.82
TMEM55B-201ENST00000250489 RARSP54136 660 aaKnown RBP32.66■■■□□ 2.82
TMEM55B-201ENST00000250489 CENPQQ7L2Z9 268 aaPredicted RBP32.66■■■□□ 2.82
TMEM55B-201ENST00000250489 ITSN1Q15811 1721 aa32.66■■■□□ 2.82
TMEM55B-201ENST00000250489 SIPA1L2Q9P2F8 1722 aaPredicted RBP32.65■■■□□ 2.82
TMEM55B-201ENST00000250489 PRR36Q9H6K5 1346 aa32.65■■■□□ 2.82
TMEM55B-201ENST00000250489 ARHGAP23Q9P227 1491 aa32.65■■■□□ 2.82
TMEM55B-201ENST00000250489 NME9Q86XW9 330 aa32.65■■■□□ 2.82
TMEM55B-201ENST00000250489 MAP2P11137 1827 aaKnown RBP32.64■■■□□ 2.81
TMEM55B-201ENST00000250489 PNNQ9H307 717 aaKnown RBP32.63■■■□□ 2.81
TMEM55B-201ENST00000250489 FBLN1P23142 703 aa32.63■■■□□ 2.81
TMEM55B-201ENST00000250489 TRIM35Q9UPQ4 493 aa32.63■■■□□ 2.81
TMEM55B-201ENST00000250489 EID1Q9Y6B2 187 aa32.62■■■□□ 2.81
TMEM55B-201ENST00000250489 LRRC7Q96NW7 1537 aa32.61■■■□□ 2.81
TMEM55B-201ENST00000250489 CANXP27824 592 aaKnown RBP32.6■■■□□ 2.81
TMEM55B-201ENST00000250489 AATKQ6ZMQ8 1374 aa32.6■■■□□ 2.81
TMEM55B-201ENST00000250489 PTPRUQ92729 1446 aa32.6■■■□□ 2.81
TMEM55B-201ENST00000250489 TOPAZ1Q8N9V7 1692 aa32.59■■■□□ 2.81
TMEM55B-201ENST00000250489 PPM1GO15355 546 aaPredicted RBP32.58■■■□□ 2.81
TMEM55B-201ENST00000250489 FCHSD2O94868 740 aa32.58■■■□□ 2.81
TMEM55B-201ENST00000250489 ZRANB1Q9UGI0 708 aa32.58■■■□□ 2.81
TMEM55B-201ENST00000250489 CDK12Q9NYV4 1490 aaPredicted RBP32.58■■■□□ 2.81
TMEM55B-201ENST00000250489 ZNF692Q9BU19 519 aaPredicted RBP32.58■■■□□ 2.81
TMEM55B-201ENST00000250489 SLC26A8Q96RN1 970 aa32.57■■■□□ 2.8
TMEM55B-201ENST00000250489 IL16Q14005 1332 aa32.56■■■□□ 2.8
TMEM55B-201ENST00000250489 PDE4AP27815 886 aa32.56■■■□□ 2.8
TMEM55B-201ENST00000250489 EMILIN1Q9Y6C2 1016 aa32.56■■■□□ 2.8
TMEM55B-201ENST00000250489 SKAP1Q86WV1 359 aa32.55■■■□□ 2.8
TMEM55B-201ENST00000250489 COG3Q96JB2 828 aa32.55■■■□□ 2.8
TMEM55B-201ENST00000250489 RSPH6AQ9H0K4 717 aa32.55■■■□□ 2.8
TMEM55B-201ENST00000250489 RIPK4P57078 832 aa32.54■■■□□ 2.8
TMEM55B-201ENST00000250489 PANK1Q8TE04 598 aa32.54■■■□□ 2.8
TMEM55B-201ENST00000250489 FRAT1Q92837 279 aaPredicted RBP32.54■■■□□ 2.8
TMEM55B-201ENST00000250489 CT47B1P0C2W7 299 aaPredicted RBP32.53■■■□□ 2.8
TMEM55B-201ENST00000250489 NRKQ7Z2Y5 1582 aa32.53■■■□□ 2.8
TMEM55B-201ENST00000250489 PLPPR3Q6T4P5 718 aa32.52■■■□□ 2.8
TMEM55B-201ENST00000250489 BACH2Q9BYV9 841 aa32.52■■■□□ 2.8
TMEM55B-201ENST00000250489 TSR2Q969E8 191 aaKnown RBP32.52■■■□□ 2.8
TMEM55B-201ENST00000250489 TBX22Q9Y458 520 aa32.52■■■□□ 2.8
TMEM55B-201ENST00000250489 COG6Q9Y2V7 657 aa32.51■■■□□ 2.8
TMEM55B-201ENST00000250489 PRKAR2BP31323 418 aa32.5■■■□□ 2.79
TMEM55B-201ENST00000250489 IL13P35225 146 aa32.49■■■□□ 2.79
TMEM55B-201ENST00000250489 THEMISQ8N1K5 641 aaPredicted RBP32.49■■■□□ 2.79
TMEM55B-201ENST00000250489 DIP2AQ14689 1571 aa32.49■■■□□ 2.79
TMEM55B-201ENST00000250489 PLEKHG3A1L390 1219 aa32.49■■■□□ 2.79
TMEM55B-201ENST00000250489 MYT1Q01538 1121 aa32.49■■■□□ 2.79
TMEM55B-201ENST00000250489 BCL2L13Q9BXK5 485 aa32.49■■■□□ 2.79
TMEM55B-201ENST00000250489 PTCH1Q13635 1447 aa32.48■■■□□ 2.79
TMEM55B-201ENST00000250489 TRHP20396 242 aaPredicted RBP32.48■■■□□ 2.79
TMEM55B-201ENST00000250489 ANP32AP39687 249 aaKnown RBP32.48■■■□□ 2.79
TMEM55B-201ENST00000250489 AMOTL2Q9Y2J4 779 aa32.48■■■□□ 2.79
TMEM55B-201ENST00000250489 CLUAP1Q96AJ1 413 aa32.47■■■□□ 2.79
TMEM55B-201ENST00000250489 EXOSC9Q06265 439 aaKnown RBP32.47■■■□□ 2.79
TMEM55B-201ENST00000250489 ACEP12821 1306 aa32.45■■■□□ 2.79
TMEM55B-201ENST00000250489 TTC21BQ7Z4L5 1316 aa32.45■■■□□ 2.78
TMEM55B-201ENST00000250489 NEFMP07197 916 aa32.44■■■□□ 2.78
TMEM55B-201ENST00000250489 TNNQ9UQP3 1299 aa32.43■■■□□ 2.78
TMEM55B-201ENST00000250489 USP6P35125 1406 aa32.43■■■□□ 2.78
TMEM55B-201ENST00000250489 HMOX1P09601 288 aa32.43■■■□□ 2.78
TMEM55B-201ENST00000250489 RLBP1P12271 317 aa32.43■■■□□ 2.78
TMEM55B-201ENST00000250489 AAMPQ13685 434 aa32.43■■■□□ 2.78
TMEM55B-201ENST00000250489 RRS1Q15050 365 aaKnown RBP32.43■■■□□ 2.78
TMEM55B-201ENST00000250489 ERICH6Q7L0X2 663 aa32.41■■■□□ 2.78
TMEM55B-201ENST00000250489 NUTM2FA1L443 756 aa32.41■■■□□ 2.78
TMEM55B-201ENST00000250489 NFE2L2Q16236 605 aa32.41■■■□□ 2.78
TMEM55B-201ENST00000250489 OVOS2A0A0J9YW53 1432 aa32.4■■■□□ 2.78
TMEM55B-201ENST00000250489 OVOS2Q6IE36 1432 aa32.4■■■□□ 2.78
TMEM55B-201ENST00000250489 IGHDP01880 384 aa32.4■■■□□ 2.78
TMEM55B-201ENST00000250489 PHACTR3Q96KR7 559 aa32.4■■■□□ 2.78
TMEM55B-201ENST00000250489 XRN1Q8IZH2 1706 aaKnown RBP32.39■■■□□ 2.78
TMEM55B-201ENST00000250489 ZKSCAN2Q63HK3 967 aa32.38■■■□□ 2.77
TMEM55B-201ENST00000250489 IPO9Q96P70 1041 aaKnown RBP32.38■■■□□ 2.77
TMEM55B-201ENST00000250489 NALCNQ8IZF0 1738 aa32.36■■■□□ 2.77
TMEM55B-201ENST00000250489 CEP170BQ9Y4F5 1589 aaPredicted RBP32.36■■■□□ 2.77
TMEM55B-201ENST00000250489 SSH2Q76I76 1423 aa32.36■■■□□ 2.77
TMEM55B-201ENST00000250489 SMC4Q9NTJ3 1288 aa32.36■■■□□ 2.77
TMEM55B-201ENST00000250489 SSH1Q8WYL5 1049 aa32.34■■■□□ 2.77
TMEM55B-201ENST00000250489 NOP58Q9Y2X3 529 aaKnown RBP32.34■■■□□ 2.77
TMEM55B-201ENST00000250489 MVPQ14764 893 aaKnown RBP32.31■■■□□ 2.76
TMEM55B-201ENST00000250489 DZIP1LQ8IYY4 767 aaKnown RBP32.3■■■□□ 2.76
TMEM55B-201ENST00000250489 USP31Q70CQ4 1352 aa32.3■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms