RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 PLEKHF1Q96S99 279 aa19.19■□□□□ 0.66
MBD4-201ENST00000249910 FAM135BQ49AJ0 1406 aa19.18■□□□□ 0.66
MBD4-201ENST00000249910 BCL2L13Q9BXK5 485 aa19.18■□□□□ 0.66
MBD4-201ENST00000249910 AMOTL2Q9Y2J4 779 aa19.18■□□□□ 0.66
MBD4-201ENST00000249910 RRS1Q15050 365 aaKnown RBP19.17■□□□□ 0.66
MBD4-201ENST00000249910 SIRT1Q96EB6 747 aa19.17■□□□□ 0.66
MBD4-201ENST00000249910 IQSEC2Q5JU85 1478 aa19.17■□□□□ 0.66
MBD4-201ENST00000249910 TECPR2O15040 1411 aa19.17■□□□□ 0.66
MBD4-201ENST00000249910 CPSF1Q10570 1443 aaKnown RBP19.17■□□□□ 0.66
MBD4-201ENST00000249910 PLEKHG1Q9ULL1 1385 aa19.17■□□□□ 0.66
MBD4-201ENST00000249910 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.17■□□□□ 0.66
MBD4-201ENST00000249910 FRAT1Q92837 279 aaPredicted RBP19.16■□□□□ 0.66
MBD4-201ENST00000249910 ATP7BP35670 1465 aa19.16■□□□□ 0.66
MBD4-201ENST00000249910 TMPOP42166 694 aaKnown RBP19.15■□□□□ 0.66
MBD4-201ENST00000249910 WDR63Q8IWG1 891 aa19.15■□□□□ 0.66
MBD4-201ENST00000249910 TSR2Q969E8 191 aaKnown RBP19.15■□□□□ 0.66
MBD4-201ENST00000249910 MED14O60244 1454 aa19.15■□□□□ 0.66
MBD4-201ENST00000249910 PTPRUQ92729 1446 aa19.15■□□□□ 0.66
MBD4-201ENST00000249910 HMOX1P09601 288 aa19.15■□□□□ 0.66
MBD4-201ENST00000249910 THEMISQ8N1K5 641 aaPredicted RBP19.15■□□□□ 0.66
MBD4-201ENST00000249910 COL3A1P02461 1466 aaPredicted RBP19.15■□□□□ 0.66
MBD4-201ENST00000249910 MAPK8IP3Q9UPT6 1336 aa19.14■□□□□ 0.66
MBD4-201ENST00000249910 PNPLA6Q8IY17 1366 aa19.14■□□□□ 0.65
MBD4-201ENST00000249910 CCDC27Q2M243 656 aa19.14■□□□□ 0.65
MBD4-201ENST00000249910 DAXXQ9UER7 740 aaPredicted RBP19.13■□□□□ 0.65
MBD4-201ENST00000249910 TRIM35Q9UPQ4 493 aa19.13■□□□□ 0.65
MBD4-201ENST00000249910 COG3Q96JB2 828 aa19.13■□□□□ 0.65
MBD4-201ENST00000249910 EDC4Q6P2E9 1401 aaKnown RBP19.12■□□□□ 0.65
MBD4-201ENST00000249910 RIPK4P57078 832 aa19.12■□□□□ 0.65
MBD4-201ENST00000249910 PMFBP1Q8TBY8 1022 aa19.12■□□□□ 0.65
MBD4-201ENST00000249910 C3P01024 1663 aa19.12■□□□□ 0.65
MBD4-201ENST00000249910 CANXP27824 592 aaKnown RBP19.12■□□□□ 0.65
MBD4-201ENST00000249910 PANK1Q8TE04 598 aa19.12■□□□□ 0.65
MBD4-201ENST00000249910 ACEP12821 1306 aa19.11■□□□□ 0.65
MBD4-201ENST00000249910 SOX12O15370 315 aa19.11■□□□□ 0.65
MBD4-201ENST00000249910 PRKAR2BP31323 418 aa19.11■□□□□ 0.65
MBD4-201ENST00000249910 RARSP54136 660 aaKnown RBP19.11■□□□□ 0.65
MBD4-201ENST00000249910 DNAJC5Q9H3Z4 198 aa19.11■□□□□ 0.65
MBD4-201ENST00000249910 CPS1P31327 1500 aa19.11■□□□□ 0.65
MBD4-201ENST00000249910 TNNQ9UQP3 1299 aa19.1■□□□□ 0.65
MBD4-201ENST00000249910 MSH5O43196 834 aa19.1■□□□□ 0.65
MBD4-201ENST00000249910 PHACTR3Q96KR7 559 aa19.1■□□□□ 0.65
MBD4-201ENST00000249910 TBX22Q9Y458 520 aa19.1■□□□□ 0.65
MBD4-201ENST00000249910 ZNF692Q9BU19 519 aaPredicted RBP19.09■□□□□ 0.65
MBD4-201ENST00000249910 COG6Q9Y2V7 657 aa19.09■□□□□ 0.65
MBD4-201ENST00000249910 RBM33Q96EV2 1170 aaKnown RBP19.09■□□□□ 0.65
MBD4-201ENST00000249910 EIF5BO60841 1220 aaKnown RBP19.08■□□□□ 0.65
MBD4-201ENST00000249910 RSPH6AQ9H0K4 717 aa19.08■□□□□ 0.64
MBD4-201ENST00000249910 MYH16Q9H6N6 1097 aa19.08■□□□□ 0.64
MBD4-201ENST00000249910 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.07■□□□□ 0.64
MBD4-201ENST00000249910 FCHSD2O94868 740 aa19.07■□□□□ 0.64
MBD4-201ENST00000249910 CLUAP1Q96AJ1 413 aa19.07■□□□□ 0.64
MBD4-201ENST00000249910 KCNA6P17658 529 aa19.07■□□□□ 0.64
MBD4-201ENST00000249910 FANCIQ9NVI1 1328 aa19.07■□□□□ 0.64
MBD4-201ENST00000249910 FER1L4A9Z1Z3 1794 aa19.06■□□□□ 0.64
MBD4-201ENST00000249910 ANO8Q9HCE9 1232 aaPredicted RBP19.06■□□□□ 0.64
MBD4-201ENST00000249910 TTC21BQ7Z4L5 1316 aa19.06■□□□□ 0.64
MBD4-201ENST00000249910 IL13P35225 146 aa19.06■□□□□ 0.64
MBD4-201ENST00000249910 EXOSC9Q06265 439 aaKnown RBP19.06■□□□□ 0.64
MBD4-201ENST00000249910 ANKRD26Q9UPS8 1709 aa19.05■□□□□ 0.64
MBD4-201ENST00000249910 KIF20BQ96Q89 1820 aa19.05■□□□□ 0.64
MBD4-201ENST00000249910 RLBP1P12271 317 aa19.05■□□□□ 0.64
MBD4-201ENST00000249910 THUMPD2Q9BTF0 503 aaKnown RBP19.05■□□□□ 0.64
MBD4-201ENST00000249910 ARHGAP23Q9P227 1491 aa19.05■□□□□ 0.64
MBD4-201ENST00000249910 UBE2Q2Q8WVN8 375 aa19.05■□□□□ 0.64
MBD4-201ENST00000249910 CDC42BPGQ6DT37 1551 aa19.04■□□□□ 0.64
MBD4-201ENST00000249910 KDM2BQ8NHM5 1336 aa19.04■□□□□ 0.64
MBD4-201ENST00000249910 KNDC1Q76NI1 1749 aa19.04■□□□□ 0.64
MBD4-201ENST00000249910 SLIT1O75093 1534 aa19.04■□□□□ 0.64
MBD4-201ENST00000249910 MAP2P11137 1827 aaKnown RBP19.04■□□□□ 0.64
MBD4-201ENST00000249910 PLEKHG3A1L390 1219 aa19.03■□□□□ 0.64
MBD4-201ENST00000249910 LAS1LQ9Y4W2 734 aaKnown RBP19.03■□□□□ 0.64
MBD4-201ENST00000249910 ADGRB2O60241 1585 aa19.02■□□□□ 0.64
MBD4-201ENST00000249910 PDE3AQ14432 1141 aa19.02■□□□□ 0.64
MBD4-201ENST00000249910 NGDNQ8NEJ9 315 aaKnown RBP19.01■□□□□ 0.63
MBD4-201ENST00000249910 TCERG1O14776 1098 aaKnown RBP19.01■□□□□ 0.63
MBD4-201ENST00000249910 NEFMP07197 916 aa19.01■□□□□ 0.63
MBD4-201ENST00000249910 NCBP3Q53F19 620 aaKnown RBP19.01■□□□□ 0.63
MBD4-201ENST00000249910 PNNQ9H307 717 aaKnown RBP19.01■□□□□ 0.63
MBD4-201ENST00000249910 AATKQ6ZMQ8 1374 aa19■□□□□ 0.63
MBD4-201ENST00000249910 IGHDP01880 384 aa18.99■□□□□ 0.63
MBD4-201ENST00000249910 HSP90AB2PQ58FF8 381 aa18.99■□□□□ 0.63
MBD4-201ENST00000249910 CENPQQ7L2Z9 268 aaPredicted RBP18.99■□□□□ 0.63
MBD4-201ENST00000249910 LRRC7Q96NW7 1537 aa18.99■□□□□ 0.63
MBD4-201ENST00000249910 AEBP1Q8IUX7 1158 aa18.99■□□□□ 0.63
MBD4-201ENST00000249910 PDE4AP27815 886 aa18.98■□□□□ 0.63
MBD4-201ENST00000249910 USP6P35125 1406 aa18.98■□□□□ 0.63
MBD4-201ENST00000249910 NUTM2GQ5VZR2 741 aa18.98■□□□□ 0.63
MBD4-201ENST00000249910 SSH1Q8WYL5 1049 aa18.98■□□□□ 0.63
MBD4-201ENST00000249910 SMC4Q9NTJ3 1288 aa18.97■□□□□ 0.63
MBD4-201ENST00000249910 FAM83GA6ND36 823 aa18.97■□□□□ 0.63
MBD4-201ENST00000249910 RGS3P49796 1198 aa18.96■□□□□ 0.63
MBD4-201ENST00000249910 EIF4A2Q14240 407 aaKnown RBP18.96■□□□□ 0.63
MBD4-201ENST00000249910 NFE2L2Q16236 605 aa18.96■□□□□ 0.63
MBD4-201ENST00000249910 DCTN1Q14203 1278 aa18.96■□□□□ 0.63
MBD4-201ENST00000249910 ANKLE2Q86XL3 938 aa18.96■□□□□ 0.63
MBD4-201ENST00000249910 SULT6B1Q6IMI4 303 aa18.95■□□□□ 0.62
MBD4-201ENST00000249910 ELL2O00472 640 aaPredicted RBP18.95■□□□□ 0.62
MBD4-201ENST00000249910 NPM2Q86SE8 214 aaKnown RBP18.95■□□□□ 0.62
MBD4-201ENST00000249910 MON2Q7Z3U7 1717 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms