RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 MYH16Q9H6N6 1097 aa25.24■■□□□ 1.63
CDC42EP1-201ENST00000249014 TNNQ9UQP3 1299 aa25.23■■□□□ 1.63
CDC42EP1-201ENST00000249014 NRXN3Q9Y4C0 1643 aa25.23■■□□□ 1.63
CDC42EP1-201ENST00000249014 RLBP1P12271 317 aa25.21■■□□□ 1.63
CDC42EP1-201ENST00000249014 FAM161AQ3B820 660 aa25.21■■□□□ 1.63
CDC42EP1-201ENST00000249014 TMPOP42166 694 aaKnown RBP25.21■■□□□ 1.63
CDC42EP1-201ENST00000249014 KIF13AQ9H1H9 1805 aa25.2■■□□□ 1.63
CDC42EP1-201ENST00000249014 PNPLA6Q8IY17 1366 aa25.2■■□□□ 1.62
CDC42EP1-201ENST00000249014 TRIM35Q9UPQ4 493 aa25.2■■□□□ 1.62
CDC42EP1-201ENST00000249014 TSR2Q969E8 191 aaKnown RBP25.18■■□□□ 1.62
CDC42EP1-201ENST00000249014 ATP7BP35670 1465 aa25.17■■□□□ 1.62
CDC42EP1-201ENST00000249014 DIAPH1O60610 1272 aaKnown RBP25.17■■□□□ 1.62
CDC42EP1-201ENST00000249014 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.17■■□□□ 1.62
CDC42EP1-201ENST00000249014 MAPK8IP3Q9UPT6 1336 aa25.16■■□□□ 1.62
CDC42EP1-201ENST00000249014 METP08581 1390 aa25.15■■□□□ 1.62
CDC42EP1-201ENST00000249014 FBLN1P23142 703 aa25.15■■□□□ 1.62
CDC42EP1-201ENST00000249014 ZMYM3Q14202 1370 aa25.15■■□□□ 1.62
CDC42EP1-201ENST00000249014 MAP2P11137 1827 aaKnown RBP25.13■■□□□ 1.61
CDC42EP1-201ENST00000249014 CDC42BPGQ6DT37 1551 aa25.12■■□□□ 1.61
CDC42EP1-201ENST00000249014 VIRMAQ69YN4 1812 aaKnown RBP25.12■■□□□ 1.61
CDC42EP1-201ENST00000249014 PCDHB15Q9Y5E8 787 aa25.12■■□□□ 1.61
CDC42EP1-201ENST00000249014 EXOSC9Q06265 439 aaKnown RBP25.11■■□□□ 1.61
CDC42EP1-201ENST00000249014 POLKQ9UBT6 870 aa25.11■■□□□ 1.61
CDC42EP1-201ENST00000249014 AAMPQ13685 434 aa25.11■■□□□ 1.61
CDC42EP1-201ENST00000249014 DDRGK1Q96HY6 314 aa25.11■■□□□ 1.61
CDC42EP1-201ENST00000249014 LRRC7Q96NW7 1537 aa25.1■■□□□ 1.61
CDC42EP1-201ENST00000249014 RIPK4P57078 832 aa25.1■■□□□ 1.61
CDC42EP1-201ENST00000249014 CPSF1Q10570 1443 aaKnown RBP25.1■■□□□ 1.61
CDC42EP1-201ENST00000249014 WASLO00401 505 aaPredicted RBP25.1■■□□□ 1.61
CDC42EP1-201ENST00000249014 CT47B1P0C2W7 299 aaPredicted RBP25.1■■□□□ 1.61
CDC42EP1-201ENST00000249014 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.1■■□□□ 1.618e-7■■□□□ 13
CDC42EP1-201ENST00000249014 TXNDC2Q86VQ3 553 aa25.09■■□□□ 1.61
CDC42EP1-201ENST00000249014 PPIP5K1Q6PFW1 1433 aa25.09■■□□□ 1.61
CDC42EP1-201ENST00000249014 IL16Q14005 1332 aa25.08■■□□□ 1.61
CDC42EP1-201ENST00000249014 KNDC1Q76NI1 1749 aa25.08■■□□□ 1.61
CDC42EP1-201ENST00000249014 PPM1GO15355 546 aaPredicted RBP25.08■■□□□ 1.61
CDC42EP1-201ENST00000249014 ESF1Q9H501 851 aaKnown RBP25.08■■□□□ 1.61
CDC42EP1-201ENST00000249014 ZKSCAN2Q63HK3 967 aa25.07■■□□□ 1.6
CDC42EP1-201ENST00000249014 PMFBP1Q8TBY8 1022 aa25.07■■□□□ 1.6
CDC42EP1-201ENST00000249014 FCHSD2O94868 740 aa25.06■■□□□ 1.6
CDC42EP1-201ENST00000249014 MVPQ14764 893 aaKnown RBP25.06■■□□□ 1.6
CDC42EP1-201ENST00000249014 EDC4Q6P2E9 1401 aaKnown RBP25.06■■□□□ 1.6
CDC42EP1-201ENST00000249014 PNNQ9H307 717 aaKnown RBP25.05■■□□□ 1.6
CDC42EP1-201ENST00000249014 LAS1LQ9Y4W2 734 aaKnown RBP25.05■■□□□ 1.6
CDC42EP1-201ENST00000249014 RSPH6AQ9H0K4 717 aa25.05■■□□□ 1.6
CDC42EP1-201ENST00000249014 SMC4Q9NTJ3 1288 aa25.05■■□□□ 1.6
CDC42EP1-201ENST00000249014 FAM135BQ49AJ0 1406 aa25.04■■□□□ 1.6
CDC42EP1-201ENST00000249014 SSH1Q8WYL5 1049 aa25.04■■□□□ 1.6
CDC42EP1-201ENST00000249014 NCKAP5LQ9HCH0 1330 aa25.04■■□□□ 1.6
CDC42EP1-201ENST00000249014 NME9Q86XW9 330 aa25.04■■□□□ 1.6
CDC42EP1-201ENST00000249014 DZIP1LQ8IYY4 767 aaKnown RBP25.04■■□□□ 1.6
CDC42EP1-201ENST00000249014 TECPR2O15040 1411 aa25.03■■□□□ 1.6
CDC42EP1-201ENST00000249014 PRKAR2BP31323 418 aa25.03■■□□□ 1.6
CDC42EP1-201ENST00000249014 MON2Q7Z3U7 1717 aa25.02■■□□□ 1.6
CDC42EP1-201ENST00000249014 UBR1Q8IWV7 1749 aa25.02■■□□□ 1.6
CDC42EP1-201ENST00000249014 DEKP35659 375 aaKnown RBP25.02■■□□□ 1.6
CDC42EP1-201ENST00000249014 NUDT16Q96DE0 195 aaKnown RBP25.02■■□□□ 1.6
CDC42EP1-201ENST00000249014 ZRANB1Q9UGI0 708 aa25.02■■□□□ 1.6
CDC42EP1-201ENST00000249014 EMILIN1Q9Y6C2 1016 aa25.02■■□□□ 1.6
CDC42EP1-201ENST00000249014 TNRQ92752 1358 aa25.02■■□□□ 1.6
CDC42EP1-201ENST00000249014 CPS1P31327 1500 aa25.02■■□□□ 1.6
CDC42EP1-201ENST00000249014 TRIM27P14373 513 aa25.01■■□□□ 1.59
CDC42EP1-201ENST00000249014 FTSJ3Q8IY81 847 aaKnown RBP25.01■■□□□ 1.59
CDC42EP1-201ENST00000249014 SLC4A3P48751 1232 aa25■■□□□ 1.59
CDC42EP1-201ENST00000249014 AKAP12Q02952 1782 aa24.99■■□□□ 1.59
CDC42EP1-201ENST00000249014 SIRT1Q96EB6 747 aa24.99■■□□□ 1.59
CDC42EP1-201ENST00000249014 HMOX1P09601 288 aa24.98■■□□□ 1.59
CDC42EP1-201ENST00000249014 RTL5Q5HYW3 569 aaPredicted RBP24.98■■□□□ 1.59
CDC42EP1-201ENST00000249014 PHACTR3Q96KR7 559 aa24.98■■□□□ 1.59
CDC42EP1-201ENST00000249014 CCDC61Q9Y6R9 512 aa24.98■■□□□ 1.59
CDC42EP1-201ENST00000249014 TMEM2Q9UHN6 1383 aa24.98■■□□□ 1.59
CDC42EP1-201ENST00000249014 HDGFP51858 240 aaKnown RBP24.97■■□□□ 1.59
CDC42EP1-201ENST00000249014 RWDD1Q9H446 243 aaPredicted RBP24.97■■□□□ 1.59
CDC42EP1-201ENST00000249014 PDZRN3Q9UPQ7 1066 aa24.97■■□□□ 1.59
CDC42EP1-201ENST00000249014 ATF7IPQ6VMQ6 1270 aa24.97■■□□□ 1.59
CDC42EP1-201ENST00000249014 NOB1Q9ULX3 412 aaKnown RBP24.97■■□□□ 1.59
CDC42EP1-201ENST00000249014 CDK12Q9NYV4 1490 aaPredicted RBP24.97■■□□□ 1.59
CDC42EP1-201ENST00000249014 ITSN1Q15811 1721 aa24.97■■□□□ 1.59
CDC42EP1-201ENST00000249014 C3P01024 1663 aa24.96■■□□□ 1.59
CDC42EP1-201ENST00000249014 IL13P35225 146 aa24.96■■□□□ 1.59
CDC42EP1-201ENST00000249014 USP19O94966 1318 aa24.96■■□□□ 1.59
CDC42EP1-201ENST00000249014 AATKQ6ZMQ8 1374 aa24.95■■□□□ 1.58
CDC42EP1-201ENST00000249014 PRR36Q9H6K5 1346 aa24.95■■□□□ 1.58
CDC42EP1-201ENST00000249014 SEC24BO95487 1268 aa24.95■■□□□ 1.58
CDC42EP1-201ENST00000249014 ROBO2Q9HCK4 1378 aa24.93■■□□□ 1.58
CDC42EP1-201ENST00000249014 NFE2L2Q16236 605 aa24.93■■□□□ 1.58
CDC42EP1-201ENST00000249014 ADAMTS13Q76LX8 1427 aa24.93■■□□□ 1.58
CDC42EP1-201ENST00000249014 NEFMP07197 916 aa24.93■■□□□ 1.58
CDC42EP1-201ENST00000249014 ITPRIPQ8IWB1 547 aa24.92■■□□□ 1.58
CDC42EP1-201ENST00000249014 COG3Q96JB2 828 aa24.92■■□□□ 1.58
CDC42EP1-201ENST00000249014 RRS1Q15050 365 aaKnown RBP24.91■■□□□ 1.58
CDC42EP1-201ENST00000249014 THUMPD2Q9BTF0 503 aaKnown RBP24.91■■□□□ 1.58
CDC42EP1-201ENST00000249014 DDX19BQ9UMR2 479 aa24.91■■□□□ 1.58
CDC42EP1-201ENST00000249014 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.91■■□□□ 1.58
CDC42EP1-201ENST00000249014 DLG5Q8TDM6 1919 aa24.9■■□□□ 1.58
CDC42EP1-201ENST00000249014 TMEM57Q8N5G2 664 aa24.9■■□□□ 1.58
CDC42EP1-201ENST00000249014 KIF16BQ96L93 1317 aa24.89■■□□□ 1.58
CDC42EP1-201ENST00000249014 ALDH1L2Q3SY69 923 aa24.88■■□□□ 1.57
CDC42EP1-201ENST00000249014 DAXXQ9UER7 740 aaPredicted RBP24.88■■□□□ 1.57
CDC42EP1-201ENST00000249014 LTKP29376 864 aa24.87■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms