RNA–Protein interactions for RNA: ENST00000248948.3

VPREB3-201, Transcript of V-set pre-B cell surrogate light chain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPREB3, Length 610 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB3-201ENST00000248948 C8orf37Q96NL8 207 aa18.11■□□□□ 0.49
VPREB3-201ENST00000248948 CABP2Q9NPB3 220 aa18.11■□□□□ 0.49
VPREB3-201ENST00000248948 PIK3C2AO00443 1686 aa18.11■□□□□ 0.49
VPREB3-201ENST00000248948 USP54Q70EL1 1684 aa18.1■□□□□ 0.49
VPREB3-201ENST00000248948 USP6P35125 1406 aa18.1■□□□□ 0.49
VPREB3-201ENST00000248948 ACEP12821 1306 aa18.1■□□□□ 0.49
VPREB3-201ENST00000248948 ADAMTS2O95450 1211 aa18.1■□□□□ 0.49
VPREB3-201ENST00000248948 POTEAQ6S8J7 498 aa18.1■□□□□ 0.49
VPREB3-201ENST00000248948 SLIT2O94813 1529 aa18.09■□□□□ 0.49
VPREB3-201ENST00000248948 USP47Q96K76 1375 aa18.08■□□□□ 0.49
VPREB3-201ENST00000248948 SOCS7O14512 581 aa18.08■□□□□ 0.48
VPREB3-201ENST00000248948 FNBP4Q8N3X1 1017 aaPredicted RBP18.06■□□□□ 0.48
VPREB3-201ENST00000248948 NGLY1Q96IV0 654 aa18.06■□□□□ 0.48
VPREB3-201ENST00000248948 ATRNO75882 1429 aa18.06■□□□□ 0.48
VPREB3-201ENST00000248948 SSH2Q76I76 1423 aa18.06■□□□□ 0.48
VPREB3-201ENST00000248948 SLC24A1O60721 1099 aa18.05■□□□□ 0.48
VPREB3-201ENST00000248948 LMOD2Q6P5Q4 547 aa18.05■□□□□ 0.48
VPREB3-201ENST00000248948 BCL9LQ86UU0 1499 aa18.05■□□□□ 0.48
VPREB3-201ENST00000248948 CPSF1Q10570 1443 aaKnown RBP18.05■□□□□ 0.48
VPREB3-201ENST00000248948 NINLQ9Y2I6 1382 aa18.04■□□□□ 0.48
VPREB3-201ENST00000248948 SLIT3O75094 1523 aa18.04■□□□□ 0.48
VPREB3-201ENST00000248948 HAP1P54257 671 aaPredicted RBP18.04■□□□□ 0.48
VPREB3-201ENST00000248948 PAK3O75914 559 aaPredicted RBP18.03■□□□□ 0.48
VPREB3-201ENST00000248948 PUS7Q96PZ0 661 aaKnown RBP18.03■□□□□ 0.48
VPREB3-201ENST00000248948 TESK2Q96S53 571 aa18.03■□□□□ 0.48
VPREB3-201ENST00000248948 MYOM1P52179 1685 aa18.03■□□□□ 0.48
VPREB3-201ENST00000248948 CD163L1Q9NR16 1453 aa18.02■□□□□ 0.48
VPREB3-201ENST00000248948 CABP1Q9NZU7 370 aa18.02■□□□□ 0.48
VPREB3-201ENST00000248948 USP21Q9UK80 565 aa18.02■□□□□ 0.48
VPREB3-201ENST00000248948 LMO7Q8WWI1 1683 aa18.02■□□□□ 0.47
VPREB3-201ENST00000248948 GLI3P10071 1580 aa18.01■□□□□ 0.47
VPREB3-201ENST00000248948 ST20-MTHFSA0A0A6YYL1 179 aa18.01■□□□□ 0.47
VPREB3-201ENST00000248948 CABLES1Q8TDN4 633 aa18.01■□□□□ 0.47
VPREB3-201ENST00000248948 TRPC5Q9UL62 973 aaPredicted RBP18.01■□□□□ 0.47
VPREB3-201ENST00000248948 USP19O94966 1318 aa18■□□□□ 0.47
VPREB3-201ENST00000248948 RGS12O14924 1447 aa18■□□□□ 0.47
VPREB3-201ENST00000248948 RXRBP28702 533 aa17.99■□□□□ 0.47
VPREB3-201ENST00000248948 RBM6P78332 1123 aaKnown RBP17.98■□□□□ 0.47
VPREB3-201ENST00000248948 KTN1Q86UP2 1357 aaKnown RBP17.97■□□□□ 0.47
VPREB3-201ENST00000248948 ABTB2Q8N961 1025 aa17.97■□□□□ 0.47
VPREB3-201ENST00000248948 ZNF692Q9BU19 519 aaPredicted RBP17.97■□□□□ 0.47
VPREB3-201ENST00000248948 TTC21AQ8NDW8 1320 aa17.97■□□□□ 0.47
VPREB3-201ENST00000248948 CPDO75976 1380 aa17.96■□□□□ 0.47
VPREB3-201ENST00000248948 UNC5CLQ8IV45 518 aa17.96■□□□□ 0.47
VPREB3-201ENST00000248948 QTRT2Q9H974 415 aaKnown RBP17.96■□□□□ 0.47
VPREB3-201ENST00000248948 ABCC6O95255 1503 aa17.96■□□□□ 0.47
VPREB3-201ENST00000248948 EDC4Q6P2E9 1401 aaKnown RBP17.96■□□□□ 0.47
VPREB3-201ENST00000248948 KIF20BQ96Q89 1820 aa17.95■□□□□ 0.46
VPREB3-201ENST00000248948 A0A1W2PP64 1363 aa17.94■□□□□ 0.46
VPREB3-201ENST00000248948 KIAA0232Q92628 1395 aa17.94■□□□□ 0.46
VPREB3-201ENST00000248948 TMF1P82094 1093 aa17.94■□□□□ 0.46
VPREB3-201ENST00000248948 NLRP13Q86W25 1043 aa17.94■□□□□ 0.46
VPREB3-201ENST00000248948 LTN1O94822 1766 aa17.94■□□□□ 0.46
VPREB3-201ENST00000248948 NFAT5O94916 1531 aa17.93■□□□□ 0.46
VPREB3-201ENST00000248948 PLEKHG5O94827 1062 aa17.93■□□□□ 0.46
VPREB3-201ENST00000248948 COL18A1P39060 1754 aa17.93■□□□□ 0.46
VPREB3-201ENST00000248948 TTC21BQ7Z4L5 1316 aa17.93■□□□□ 0.46
VPREB3-201ENST00000248948 BRWD3Q6RI45 1802 aa17.93■□□□□ 0.46
VPREB3-201ENST00000248948 PRDM11Q9NQV5 511 aa17.92■□□□□ 0.46
VPREB3-201ENST00000248948 ANKRD36BQ8N2N9 1353 aa17.91■□□□□ 0.46
VPREB3-201ENST00000248948 WNK3Q9BYP7 1800 aa17.91■□□□□ 0.46
VPREB3-201ENST00000248948 THSD7AQ9UPZ6 1657 aa17.91■□□□□ 0.46
VPREB3-201ENST00000248948 FAM83GA6ND36 823 aa17.91■□□□□ 0.46
VPREB3-201ENST00000248948 VPS72Q15906 364 aa17.91■□□□□ 0.46
VPREB3-201ENST00000248948 CDCA8Q53HL2 280 aa17.91■□□□□ 0.46
VPREB3-201ENST00000248948 HDGFL2Q7Z4V5 671 aaPredicted RBP17.91■□□□□ 0.46
VPREB3-201ENST00000248948 TERF2IPQ9NYB0 399 aa17.91■□□□□ 0.46
VPREB3-201ENST00000248948 USP31Q70CQ4 1352 aa17.91■□□□□ 0.46
VPREB3-201ENST00000248948 NUTM2GQ5VZR2 741 aa17.9■□□□□ 0.46
VPREB3-201ENST00000248948 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
VPREB3-201ENST00000248948 GJD4Q96KN9 370 aaPredicted RBP17.9■□□□□ 0.46
VPREB3-201ENST00000248948 OVOS2A0A0J9YW53 1432 aa17.89■□□□□ 0.46
VPREB3-201ENST00000248948 OVOS2Q6IE36 1432 aa17.89■□□□□ 0.46
VPREB3-201ENST00000248948 CAMTA1Q9Y6Y1 1673 aa17.89■□□□□ 0.45
VPREB3-201ENST00000248948 NLRP6P59044 892 aa17.88■□□□□ 0.45
VPREB3-201ENST00000248948 BTG4Q9NY30 223 aa17.88■□□□□ 0.45
VPREB3-201ENST00000248948 RGPD5Q99666 1765 aa17.88■□□□□ 0.45
VPREB3-201ENST00000248948 COL5A2P05997 1499 aaPredicted RBP17.88■□□□□ 0.45
VPREB3-201ENST00000248948 GCP02774 474 aa17.87■□□□□ 0.45
VPREB3-201ENST00000248948 SLC12A5Q9H2X9 1139 aa17.87■□□□□ 0.45
VPREB3-201ENST00000248948 ZC3H6P61129 1189 aaKnown RBP17.85■□□□□ 0.45
VPREB3-201ENST00000248948 EIF4G2P78344 907 aaKnown RBP eCLIP17.85■□□□□ 0.45
VPREB3-201ENST00000248948 KCNH5Q8NCM2 988 aa17.85■□□□□ 0.45
VPREB3-201ENST00000248948 FAM208AQ9UK61 1670 aaKnown RBP17.85■□□□□ 0.45
VPREB3-201ENST00000248948 ANKRD26Q9UPS8 1709 aa17.85■□□□□ 0.45
VPREB3-201ENST00000248948 AATKQ6ZMQ8 1374 aa17.84■□□□□ 0.45
VPREB3-201ENST00000248948 PARP4Q9UKK3 1724 aaKnown RBP17.84■□□□□ 0.45
VPREB3-201ENST00000248948 EP400Q96L91 3159 aa17.83■□□□□ 0.45
VPREB3-201ENST00000248948 CHRNA2Q15822 529 aa17.83■□□□□ 0.44
VPREB3-201ENST00000248948 SPATA31A5Q5VU36 1347 aa17.82■□□□□ 0.44
VPREB3-201ENST00000248948 SPATA31A7Q8IWB4 1347 aa17.82■□□□□ 0.44
VPREB3-201ENST00000248948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.81■□□□□ 0.44
VPREB3-201ENST00000248948 CCDC9Q9Y3X0 531 aaKnown RBP17.81■□□□□ 0.44
VPREB3-201ENST00000248948 NME9Q86XW9 330 aa17.8■□□□□ 0.44
VPREB3-201ENST00000248948 ONECUT3O60422 494 aaPredicted RBP17.79■□□□□ 0.44
VPREB3-201ENST00000248948 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
VPREB3-201ENST00000248948 CRB1P82279 1406 aa17.79■□□□□ 0.44
VPREB3-201ENST00000248948 LRRC37A3O60309 1634 aa17.79■□□□□ 0.44
VPREB3-201ENST00000248948 SPATA31A1Q5TZJ5 1347 aa17.78■□□□□ 0.44
VPREB3-201ENST00000248948 ARHGEF25Q86VW2 580 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms