RNA–Protein interactions for RNA: ENST00000248929.13

SGSM3-201, Transcript of small G protein signaling modulator 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGSM3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGSM3-201ENST00000248929 TMEM131LA2VDJ0 1609 aa17.3■□□□□ 0.36
SGSM3-201ENST00000248929 PREX1Q8TCU6 1659 aa17.3■□□□□ 0.36
SGSM3-201ENST00000248929 ATAD2Q6PL18 1390 aa17.3■□□□□ 0.36
SGSM3-201ENST00000248929 ZFYVE9O95405 1425 aa17.3■□□□□ 0.36
SGSM3-201ENST00000248929 TMPOP42166 694 aaKnown RBP17.3■□□□□ 0.36
SGSM3-201ENST00000248929 EXOSC9Q06265 439 aaKnown RBP17.3■□□□□ 0.36
SGSM3-201ENST00000248929 CCDC27Q2M243 656 aa17.28■□□□□ 0.36
SGSM3-201ENST00000248929 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
SGSM3-201ENST00000248929 DDRGK1Q96HY6 314 aa17.28■□□□□ 0.36
SGSM3-201ENST00000248929 PLEKHF1Q96S99 279 aa17.28■□□□□ 0.36
SGSM3-201ENST00000248929 RIPK4P57078 832 aa17.28■□□□□ 0.36
SGSM3-201ENST00000248929 SMC4Q9NTJ3 1288 aa17.28■□□□□ 0.36
SGSM3-201ENST00000248929 TRIM35Q9UPQ4 493 aa17.28■□□□□ 0.36
SGSM3-201ENST00000248929 FTSJ3Q8IY81 847 aaKnown RBP17.27■□□□□ 0.36
SGSM3-201ENST00000248929 CD163L1Q9NR16 1453 aa17.27■□□□□ 0.36
SGSM3-201ENST00000248929 DIAPH1O60610 1272 aaKnown RBP17.27■□□□□ 0.35
SGSM3-201ENST00000248929 NCKAP5LQ9HCH0 1330 aa17.26■□□□□ 0.35
SGSM3-201ENST00000248929 SEC24BO95487 1268 aa17.25■□□□□ 0.35
SGSM3-201ENST00000248929 ALKQ9UM73 1620 aa17.25■□□□□ 0.35
SGSM3-201ENST00000248929 HMOX1P09601 288 aa17.25■□□□□ 0.35
SGSM3-201ENST00000248929 TXNDC2Q86VQ3 553 aa17.25■□□□□ 0.35
SGSM3-201ENST00000248929 ZRANB1Q9UGI0 708 aa17.25■□□□□ 0.35
SGSM3-201ENST00000248929 NINLQ9Y2I6 1382 aa17.24■□□□□ 0.35
SGSM3-201ENST00000248929 SSH1Q8WYL5 1049 aa17.23■□□□□ 0.35
SGSM3-201ENST00000248929 ZKSCAN2Q63HK3 967 aa17.23■□□□□ 0.35
SGSM3-201ENST00000248929 PRKAR2BP31323 418 aa17.22■□□□□ 0.35
SGSM3-201ENST00000248929 THUMPD2Q9BTF0 503 aaKnown RBP17.22■□□□□ 0.35
SGSM3-201ENST00000248929 DZIP1LQ8IYY4 767 aaKnown RBP17.22■□□□□ 0.35
SGSM3-201ENST00000248929 PDZRN3Q9UPQ7 1066 aa17.22■□□□□ 0.35
SGSM3-201ENST00000248929 EMILIN1Q9Y6C2 1016 aa17.22■□□□□ 0.35
SGSM3-201ENST00000248929 NLRP1Q9C000 1473 aa17.22■□□□□ 0.35
SGSM3-201ENST00000248929 MVPQ14764 893 aaKnown RBP17.21■□□□□ 0.35
SGSM3-201ENST00000248929 NME9Q86XW9 330 aa17.21■□□□□ 0.35
SGSM3-201ENST00000248929 ITPRIPQ8IWB1 547 aa17.21■□□□□ 0.35
SGSM3-201ENST00000248929 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.35
SGSM3-201ENST00000248929 ESF1Q9H501 851 aaKnown RBP17.21■□□□□ 0.35
SGSM3-201ENST00000248929 RIMS2Q9UQ26 1411 aa17.21■□□□□ 0.35
SGSM3-201ENST00000248929 TRIM27P14373 513 aa17.21■□□□□ 0.35
SGSM3-201ENST00000248929 POLKQ9UBT6 870 aa17.21■□□□□ 0.35
SGSM3-201ENST00000248929 ARHGEF40Q8TER5 1519 aa17.21■□□□□ 0.34
SGSM3-201ENST00000248929 COL3A1P02461 1466 aaPredicted RBP17.2■□□□□ 0.34
SGSM3-201ENST00000248929 A2ML1A8K2U0 1454 aa17.2■□□□□ 0.34
SGSM3-201ENST00000248929 NUTM2FA1L443 756 aa17.19■□□□□ 0.34
SGSM3-201ENST00000248929 NOB1Q9ULX3 412 aaKnown RBP17.19■□□□□ 0.34
SGSM3-201ENST00000248929 PHACTR3Q96KR7 559 aa17.19■□□□□ 0.34
SGSM3-201ENST00000248929 METP08581 1390 aa17.18■□□□□ 0.34
SGSM3-201ENST00000248929 CLTCQ00610 1675 aaKnown RBP17.18■□□□□ 0.34
SGSM3-201ENST00000248929 DIP2BQ9P265 1576 aa17.18■□□□□ 0.34
SGSM3-201ENST00000248929 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
SGSM3-201ENST00000248929 RRS1Q15050 365 aaKnown RBP17.17■□□□□ 0.34
SGSM3-201ENST00000248929 ADGRB2O60241 1585 aa17.17■□□□□ 0.34
SGSM3-201ENST00000248929 RWDD1Q9H446 243 aaPredicted RBP17.17■□□□□ 0.34
SGSM3-201ENST00000248929 USP19O94966 1318 aa17.16■□□□□ 0.34
SGSM3-201ENST00000248929 WASLO00401 505 aaPredicted RBP17.15■□□□□ 0.34
SGSM3-201ENST00000248929 ATF7IPQ6VMQ6 1270 aa17.15■□□□□ 0.34
SGSM3-201ENST00000248929 RSPH6AQ9H0K4 717 aa17.15■□□□□ 0.34
SGSM3-201ENST00000248929 TMEM57Q8N5G2 664 aa17.15■□□□□ 0.34
SGSM3-201ENST00000248929 NFKBIBQ15653 356 aa17.14■□□□□ 0.33
SGSM3-201ENST00000248929 FCHSD2O94868 740 aa17.13■□□□□ 0.33
SGSM3-201ENST00000248929 NUDT16Q96DE0 195 aaKnown RBP17.13■□□□□ 0.33
SGSM3-201ENST00000248929 PPIP5K1Q6PFW1 1433 aa17.13■□□□□ 0.33
SGSM3-201ENST00000248929 PNPLA6Q8IY17 1366 aa17.13■□□□□ 0.33
SGSM3-201ENST00000248929 SOX12O15370 315 aa17.12■□□□□ 0.33
SGSM3-201ENST00000248929 ZMYM3Q14202 1370 aa17.12■□□□□ 0.33
SGSM3-201ENST00000248929 CEBPAP49715 358 aaPredicted RBP17.11■□□□□ 0.33
SGSM3-201ENST00000248929 IL27Q8NEV9 243 aa17.11■□□□□ 0.33
SGSM3-201ENST00000248929 PNNQ9H307 717 aaKnown RBP17.11■□□□□ 0.33
SGSM3-201ENST00000248929 MED14O60244 1454 aa17.11■□□□□ 0.33
SGSM3-201ENST00000248929 LRRC7Q96NW7 1537 aa17.11■□□□□ 0.33
SGSM3-201ENST00000248929 CT47B1P0C2W7 299 aaPredicted RBP17.1■□□□□ 0.33
SGSM3-201ENST00000248929 NCBP3Q53F19 620 aaKnown RBP17.1■□□□□ 0.33
SGSM3-201ENST00000248929 TSPYL6Q8N831 410 aa17.1■□□□□ 0.33
SGSM3-201ENST00000248929 RTN4Q9NQC3 1192 aaKnown RBP17.1■□□□□ 0.33
SGSM3-201ENST00000248929 PPP6R1Q9UPN7 881 aa17.1■□□□□ 0.33
SGSM3-201ENST00000248929 FAM83GA6ND36 823 aa17.1■□□□□ 0.33
SGSM3-201ENST00000248929 DDX19BQ9UMR2 479 aa17.1■□□□□ 0.33
SGSM3-201ENST00000248929 DCTN1Q14203 1278 aa17.09■□□□□ 0.33
SGSM3-201ENST00000248929 COG3Q96JB2 828 aa17.09■□□□□ 0.33
SGSM3-201ENST00000248929 AAMPQ13685 434 aa17.09■□□□□ 0.33
SGSM3-201ENST00000248929 IL16Q14005 1332 aa17.09■□□□□ 0.33
SGSM3-201ENST00000248929 NFE2L2Q16236 605 aa17.08■□□□□ 0.33
SGSM3-201ENST00000248929 SLKQ9H2G2 1235 aaPredicted RBP17.08■□□□□ 0.33
SGSM3-201ENST00000248929 CCDC61Q9Y6R9 512 aa17.08■□□□□ 0.33
SGSM3-201ENST00000248929 USP35Q9P2H5 1018 aa17.08■□□□□ 0.32
SGSM3-201ENST00000248929 SPATA31D1Q6ZQQ2 1576 aa17.08■□□□□ 0.32
SGSM3-201ENST00000248929 IL13P35225 146 aa17.07■□□□□ 0.32
SGSM3-201ENST00000248929 C1orf115Q9H7X2 142 aa17.07■□□□□ 0.32
SGSM3-201ENST00000248929 FRAT2O75474 233 aaPredicted RBP17.07■□□□□ 0.32
SGSM3-201ENST00000248929 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.07■□□□□ 0.32
SGSM3-201ENST00000248929 AGLP35573 1532 aa17.07■□□□□ 0.32
SGSM3-201ENST00000248929 FAM135BQ49AJ0 1406 aa17.06■□□□□ 0.32
SGSM3-201ENST00000248929 ATP7BP35670 1465 aa17.06■□□□□ 0.32
SGSM3-201ENST00000248929 ANKRD26Q9UPS8 1709 aa17.06■□□□□ 0.32
SGSM3-201ENST00000248929 PRR36Q9H6K5 1346 aa17.06■□□□□ 0.32
SGSM3-201ENST00000248929 UPF2Q9HAU5 1272 aaKnown RBP17.06■□□□□ 0.32
SGSM3-201ENST00000248929 KIF16BQ96L93 1317 aa17.06■□□□□ 0.32
SGSM3-201ENST00000248929 KIF20BQ96Q89 1820 aa17.05■□□□□ 0.32
SGSM3-201ENST00000248929 IPO8O15397 1037 aaKnown RBP17.05■□□□□ 0.32
SGSM3-201ENST00000248929 SLC26A8Q96RN1 970 aa17.05■□□□□ 0.32
SGSM3-201ENST00000248929 SPRYD3Q8NCJ5 442 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms