RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 IQSEC2Q5JU85 1478 aa20.38■□□□□ 0.85
LRFN1-201ENST00000248668 DIAPH1O60610 1272 aaKnown RBP20.37■□□□□ 0.85
LRFN1-201ENST00000248668 EIF5BO60841 1220 aaKnown RBP20.37■□□□□ 0.85
LRFN1-201ENST00000248668 WDR63Q8IWG1 891 aa20.37■□□□□ 0.85
LRFN1-201ENST00000248668 NME9Q86XW9 330 aa20.36■□□□□ 0.85
LRFN1-201ENST00000248668 PHF23Q9BUL5 403 aaPredicted RBP20.36■□□□□ 0.85
LRFN1-201ENST00000248668 SPATA31D1Q6ZQQ2 1576 aa20.36■□□□□ 0.85
LRFN1-201ENST00000248668 IGHDP01880 384 aa20.35■□□□□ 0.85
LRFN1-201ENST00000248668 RLBP1P12271 317 aa20.35■□□□□ 0.85
LRFN1-201ENST00000248668 TMPOP42166 694 aaKnown RBP20.35■□□□□ 0.85
LRFN1-201ENST00000248668 MS4A1P11836 297 aa20.35■□□□□ 0.85
LRFN1-201ENST00000248668 HMOX1P09601 288 aa20.35■□□□□ 0.85
LRFN1-201ENST00000248668 ZBTB47Q9UFB7 747 aaPredicted RBP20.35■□□□□ 0.85
LRFN1-201ENST00000248668 WASLO00401 505 aaPredicted RBP20.34■□□□□ 0.85
LRFN1-201ENST00000248668 EMILIN1Q9Y6C2 1016 aa20.34■□□□□ 0.85
LRFN1-201ENST00000248668 RIPK4P57078 832 aa20.34■□□□□ 0.85
LRFN1-201ENST00000248668 IL27Q8NEV9 243 aa20.34■□□□□ 0.85
LRFN1-201ENST00000248668 PLEKHF1Q96S99 279 aa20.34■□□□□ 0.85
LRFN1-201ENST00000248668 MYH16Q9H6N6 1097 aa20.33■□□□□ 0.85
LRFN1-201ENST00000248668 NLRP1Q9C000 1473 aa20.33■□□□□ 0.84
LRFN1-201ENST00000248668 REREQ9P2R6 1566 aa20.32■□□□□ 0.84
LRFN1-201ENST00000248668 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.32■□□□□ 0.84
LRFN1-201ENST00000248668 TNRQ92752 1358 aa20.32■□□□□ 0.84
LRFN1-201ENST00000248668 KIF13AQ9H1H9 1805 aa20.32■□□□□ 0.84
LRFN1-201ENST00000248668 EXOSC9Q06265 439 aaKnown RBP20.32■□□□□ 0.84
LRFN1-201ENST00000248668 NUDT16Q96DE0 195 aaKnown RBP20.32■□□□□ 0.84
LRFN1-201ENST00000248668 POLKQ9UBT6 870 aa20.32■□□□□ 0.84
LRFN1-201ENST00000248668 TRIM35Q9UPQ4 493 aa20.32■□□□□ 0.84
LRFN1-201ENST00000248668 LAS1LQ9Y4W2 734 aaKnown RBP20.31■□□□□ 0.84
LRFN1-201ENST00000248668 PDE3AQ14432 1141 aa20.31■□□□□ 0.84
LRFN1-201ENST00000248668 SLC26A8Q96RN1 970 aa20.31■□□□□ 0.84
LRFN1-201ENST00000248668 CCDC27Q2M243 656 aa20.31■□□□□ 0.84
LRFN1-201ENST00000248668 RRS1Q15050 365 aaKnown RBP20.3■□□□□ 0.84
LRFN1-201ENST00000248668 PPIP5K1Q6PFW1 1433 aa20.3■□□□□ 0.84
LRFN1-201ENST00000248668 PRKAR2BP31323 418 aa20.3■□□□□ 0.84
LRFN1-201ENST00000248668 SOX12O15370 315 aa20.28■□□□□ 0.84
LRFN1-201ENST00000248668 THUMPD2Q9BTF0 503 aaKnown RBP20.28■□□□□ 0.84
LRFN1-201ENST00000248668 COL3A1P02461 1466 aaPredicted RBP20.28■□□□□ 0.84
LRFN1-201ENST00000248668 LTKP29376 864 aa20.28■□□□□ 0.84
LRFN1-201ENST00000248668 SMC4Q9NTJ3 1288 aa20.27■□□□□ 0.84
LRFN1-201ENST00000248668 HDGFP51858 240 aaKnown RBP20.26■□□□□ 0.83
LRFN1-201ENST00000248668 PHACTR3Q96KR7 559 aa20.25■□□□□ 0.83
LRFN1-201ENST00000248668 CCDC61Q9Y6R9 512 aa20.25■□□□□ 0.83
LRFN1-201ENST00000248668 FTSJ3Q8IY81 847 aaKnown RBP20.25■□□□□ 0.83
LRFN1-201ENST00000248668 PCDHB15Q9Y5E8 787 aa20.25■□□□□ 0.83
LRFN1-201ENST00000248668 PRR36Q9H6K5 1346 aa20.24■□□□□ 0.83
LRFN1-201ENST00000248668 NRXN3Q9Y4C0 1643 aa20.24■□□□□ 0.83
LRFN1-201ENST00000248668 TMEM2Q9UHN6 1383 aa20.23■□□□□ 0.83
LRFN1-201ENST00000248668 SSH1Q8WYL5 1049 aa20.23■□□□□ 0.83
LRFN1-201ENST00000248668 ROBO2Q9HCK4 1378 aa20.23■□□□□ 0.83
LRFN1-201ENST00000248668 NEFMP07197 916 aa20.23■□□□□ 0.83
LRFN1-201ENST00000248668 COG3Q96JB2 828 aa20.23■□□□□ 0.83
LRFN1-201ENST00000248668 SETD1AO15047 1707 aaKnown RBP20.22■□□□□ 0.83
LRFN1-201ENST00000248668 DLC1Q96QB1 1528 aa20.22■□□□□ 0.83
LRFN1-201ENST00000248668 RSPH6AQ9H0K4 717 aa20.21■□□□□ 0.83
LRFN1-201ENST00000248668 SLC4A3P48751 1232 aa20.21■□□□□ 0.83
LRFN1-201ENST00000248668 C8orf34Q49A92 452 aa20.21■□□□□ 0.83
LRFN1-201ENST00000248668 FAM161AQ3B820 660 aa20.21■□□□□ 0.83
LRFN1-201ENST00000248668 PNPLA6Q8IY17 1366 aa20.21■□□□□ 0.83
LRFN1-201ENST00000248668 MED14O60244 1454 aa20.2■□□□□ 0.82
LRFN1-201ENST00000248668 ZKSCAN2Q63HK3 967 aa20.2■□□□□ 0.82
LRFN1-201ENST00000248668 ELL2O00472 640 aaPredicted RBP20.2■□□□□ 0.82
LRFN1-201ENST00000248668 FCHSD2O94868 740 aa20.2■□□□□ 0.82
LRFN1-201ENST00000248668 ATP7BP35670 1465 aa20.2■□□□□ 0.82
LRFN1-201ENST00000248668 ADGRB2O60241 1585 aa20.2■□□□□ 0.82
LRFN1-201ENST00000248668 DZIP1LQ8IYY4 767 aaKnown RBP20.18■□□□□ 0.82
LRFN1-201ENST00000248668 ITPRIPQ8IWB1 547 aa20.18■□□□□ 0.82
LRFN1-201ENST00000248668 KIF20BQ96Q89 1820 aa20.18■□□□□ 0.82
LRFN1-201ENST00000248668 TRIM27P14373 513 aa20.18■□□□□ 0.82
LRFN1-201ENST00000248668 NOB1Q9ULX3 412 aaKnown RBP20.18■□□□□ 0.82
LRFN1-201ENST00000248668 CPS1P31327 1500 aa20.18■□□□□ 0.82
LRFN1-201ENST00000248668 EDC4Q6P2E9 1401 aaKnown RBP20.18■□□□□ 0.82
LRFN1-201ENST00000248668 TRHP20396 242 aaPredicted RBP20.17■□□□□ 0.82
LRFN1-201ENST00000248668 CPSF1Q10570 1443 aaKnown RBP20.17■□□□□ 0.82
LRFN1-201ENST00000248668 PMFBP1Q8TBY8 1022 aa20.17■□□□□ 0.82
LRFN1-201ENST00000248668 ANKRD26Q9UPS8 1709 aa20.17■□□□□ 0.82
LRFN1-201ENST00000248668 PNNQ9H307 717 aaKnown RBP20.17■□□□□ 0.82
LRFN1-201ENST00000248668 RTL5Q5HYW3 569 aaPredicted RBP20.16■□□□□ 0.82
LRFN1-201ENST00000248668 LRRC7Q96NW7 1537 aa20.16■□□□□ 0.82
LRFN1-201ENST00000248668 MVPQ14764 893 aaKnown RBP20.16■□□□□ 0.82
LRFN1-201ENST00000248668 IL13P35225 146 aa20.15■□□□□ 0.82
LRFN1-201ENST00000248668 MAP2P11137 1827 aaKnown RBP20.15■□□□□ 0.82
LRFN1-201ENST00000248668 FAM83GA6ND36 823 aa20.15■□□□□ 0.82
LRFN1-201ENST00000248668 DCTN1Q14203 1278 aa20.15■□□□□ 0.82
LRFN1-201ENST00000248668 ADAMTS13Q76LX8 1427 aa20.15■□□□□ 0.82
LRFN1-201ENST00000248668 EID1Q9Y6B2 187 aa20.14■□□□□ 0.82
LRFN1-201ENST00000248668 ACEP12821 1306 aa20.14■□□□□ 0.82
LRFN1-201ENST00000248668 NFE2L2Q16236 605 aa20.13■□□□□ 0.81
LRFN1-201ENST00000248668 AEBP1Q8IUX7 1158 aa20.13■□□□□ 0.81
LRFN1-201ENST00000248668 AMOTL2Q9Y2J4 779 aa20.13■□□□□ 0.81
LRFN1-201ENST00000248668 UBE2Q2Q8WVN8 375 aa20.12■□□□□ 0.81
LRFN1-201ENST00000248668 PDZRN3Q9UPQ7 1066 aa20.12■□□□□ 0.81
LRFN1-201ENST00000248668 FAM135BQ49AJ0 1406 aa20.12■□□□□ 0.81
LRFN1-201ENST00000248668 ATF7IPQ6VMQ6 1270 aa20.11■□□□□ 0.81
LRFN1-201ENST00000248668 TMEM57Q8N5G2 664 aa20.11■□□□□ 0.81
LRFN1-201ENST00000248668 TSPYL6Q8N831 410 aa20.11■□□□□ 0.81
LRFN1-201ENST00000248668 NCBP3Q53F19 620 aaKnown RBP20.11■□□□□ 0.81
LRFN1-201ENST00000248668 UBR1Q8IWV7 1749 aa20.1■□□□□ 0.81
LRFN1-201ENST00000248668 TTC21BQ7Z4L5 1316 aa20.1■□□□□ 0.81
LRFN1-201ENST00000248668 IL16Q14005 1332 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms