RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 NPHP4O75161 1426 aaPredicted RBP17.79■□□□□ 0.44
NUP85-201ENST00000245544 PMFBP1Q8TBY8 1022 aa17.79■□□□□ 0.44
NUP85-201ENST00000245544 ZNF521Q96K83 1311 aa17.79■□□□□ 0.44
NUP85-201ENST00000245544 COL3A1P02461 1466 aaPredicted RBP17.78■□□□□ 0.44
NUP85-201ENST00000245544 ZNF692Q9BU19 519 aaPredicted RBP17.78■□□□□ 0.44
NUP85-201ENST00000245544 POLKQ9UBT6 870 aa17.76■□□□□ 0.43
NUP85-201ENST00000245544 MAP2P11137 1827 aaKnown RBP17.75■□□□□ 0.43
NUP85-201ENST00000245544 U2AF1L5P0DN76 240 aaPredicted RBP17.75■□□□□ 0.43
NUP85-201ENST00000245544 U2AF1Q01081 240 aaKnown RBP eCLIP17.75■□□□□ 0.43
NUP85-201ENST00000245544 RNF123Q5XPI4 1314 aa17.75■□□□□ 0.43
NUP85-201ENST00000245544 NRKQ7Z2Y5 1582 aa17.75■□□□□ 0.43
NUP85-201ENST00000245544 TTC21BQ7Z4L5 1316 aa17.75■□□□□ 0.43
NUP85-201ENST00000245544 NALCNQ8IZF0 1738 aa17.74■□□□□ 0.43
NUP85-201ENST00000245544 USP6P35125 1406 aa17.74■□□□□ 0.43
NUP85-201ENST00000245544 PPM1GO15355 546 aaPredicted RBP17.74■□□□□ 0.43
NUP85-201ENST00000245544 PNPLA6Q8IY17 1366 aa17.74■□□□□ 0.43
NUP85-201ENST00000245544 DMRT2Q9Y5R5 561 aa17.74■□□□□ 0.43
NUP85-201ENST00000245544 EMILIN1Q9Y6C2 1016 aa17.74■□□□□ 0.43
NUP85-201ENST00000245544 U2SURPO15042 1029 aaKnown RBP17.73■□□□□ 0.43
NUP85-201ENST00000245544 RUNDC1Q96C34 613 aa17.73■□□□□ 0.43
NUP85-201ENST00000245544 COG3Q96JB2 828 aa17.73■□□□□ 0.43
NUP85-201ENST00000245544 SPINK5Q9NQ38 1064 aaPredicted RBP17.73■□□□□ 0.43
NUP85-201ENST00000245544 RRP7AQ9Y3A4 280 aaKnown RBP17.73■□□□□ 0.43
NUP85-201ENST00000245544 FMN2Q9NZ56 1722 aa17.72■□□□□ 0.43
NUP85-201ENST00000245544 GOLGA2Q08379 1002 aa17.72■□□□□ 0.43
NUP85-201ENST00000245544 TCP11L2Q8N4U5 519 aa17.72■□□□□ 0.43
NUP85-201ENST00000245544 SSH2Q76I76 1423 aa17.72■□□□□ 0.43
NUP85-201ENST00000245544 RRS1Q15050 365 aaKnown RBP17.71■□□□□ 0.43
NUP85-201ENST00000245544 NEUROD2Q15784 382 aa17.71■□□□□ 0.43
NUP85-201ENST00000245544 RCAN3Q9UKA8 241 aa17.71■□□□□ 0.43
NUP85-201ENST00000245544 IQSEC2Q5JU85 1478 aa17.71■□□□□ 0.43
NUP85-201ENST00000245544 DUSP27Q5VZP5 1158 aa17.71■□□□□ 0.42
NUP85-201ENST00000245544 NGDNQ8NEJ9 315 aaKnown RBP17.71■□□□□ 0.42
NUP85-201ENST00000245544 DIAPH1O60610 1272 aaKnown RBP17.7■□□□□ 0.42
NUP85-201ENST00000245544 KDM4FA0A1W2PPD8 638 aa17.69■□□□□ 0.42
NUP85-201ENST00000245544 HSPA2P54652 639 aa17.69■□□□□ 0.42
NUP85-201ENST00000245544 SLFN5Q08AF3 891 aa17.69■□□□□ 0.42
NUP85-201ENST00000245544 WWC1Q8IX03 1113 aa17.69■□□□□ 0.42
NUP85-201ENST00000245544 ANKARQ7Z5J8 1434 aa17.68■□□□□ 0.42
NUP85-201ENST00000245544 AATKQ6ZMQ8 1374 aa17.68■□□□□ 0.42
NUP85-201ENST00000245544 OVOS2A0A0J9YW53 1432 aa17.68■□□□□ 0.42
NUP85-201ENST00000245544 OVOS2Q6IE36 1432 aa17.68■□□□□ 0.42
NUP85-201ENST00000245544 PLEKHF1Q96S99 279 aa17.68■□□□□ 0.42
NUP85-201ENST00000245544 TRMT2AQ8IZ69 625 aaKnown RBP17.67■□□□□ 0.42
NUP85-201ENST00000245544 ADGRL3Q9HAR2 1447 aa17.66■□□□□ 0.42
NUP85-201ENST00000245544 RRP1P56182 461 aaKnown RBP17.65■□□□□ 0.42
NUP85-201ENST00000245544 PHF23Q9BUL5 403 aaPredicted RBP17.65■□□□□ 0.42
NUP85-201ENST00000245544 NWD1Q149M9 1564 aa17.64■□□□□ 0.41
NUP85-201ENST00000245544 SOX12O15370 315 aa17.64■□□□□ 0.41
NUP85-201ENST00000245544 NGEFQ8N5V2 710 aa17.64■□□□□ 0.41
NUP85-201ENST00000245544 C14orf37Q86TY3 774 aa17.63■□□□□ 0.41
NUP85-201ENST00000245544 CDK12Q9NYV4 1490 aaPredicted RBP17.63■□□□□ 0.41
NUP85-201ENST00000245544 IL13P35225 146 aa17.63■□□□□ 0.41
NUP85-201ENST00000245544 ERICH6BQ5W0A0 696 aa17.63■□□□□ 0.41
NUP85-201ENST00000245544 TTC21AQ8NDW8 1320 aa17.63■□□□□ 0.41
NUP85-201ENST00000245544 PIK3C2AO00443 1686 aa17.62■□□□□ 0.41
NUP85-201ENST00000245544 PROSER2Q86WR7 435 aaPredicted RBP17.62■□□□□ 0.41
NUP85-201ENST00000245544 PHF8Q9UPP1 1060 aa17.62■□□□□ 0.41
NUP85-201ENST00000245544 E9PSI1 815 aa17.61■□□□□ 0.41
NUP85-201ENST00000245544 PLIN1O60240 522 aa17.61■□□□□ 0.41
NUP85-201ENST00000245544 HMOX1P09601 288 aa17.61■□□□□ 0.41
NUP85-201ENST00000245544 USP31Q70CQ4 1352 aa17.61■□□□□ 0.41
NUP85-201ENST00000245544 NUTM2GQ5VZR2 741 aa17.6■□□□□ 0.41
NUP85-201ENST00000245544 RSPH6AQ9H0K4 717 aa17.6■□□□□ 0.41
NUP85-201ENST00000245544 PPP4R2Q9NY27 417 aa17.6■□□□□ 0.41
NUP85-201ENST00000245544 LRRC7Q96NW7 1537 aa17.6■□□□□ 0.41
NUP85-201ENST00000245544 ESCO1Q5FWF5 840 aa17.6■□□□□ 0.41
NUP85-201ENST00000245544 STRCP1A6NGW2 1772 aa17.59■□□□□ 0.41
NUP85-201ENST00000245544 PEAK1Q9H792 1746 aa17.59■□□□□ 0.41
NUP85-201ENST00000245544 TMPOP42166 694 aaKnown RBP17.59■□□□□ 0.41
NUP85-201ENST00000245544 CCDC27Q2M243 656 aa17.59■□□□□ 0.41
NUP85-201ENST00000245544 FCHSD2O94868 740 aa17.59■□□□□ 0.41
NUP85-201ENST00000245544 PRKAR2BP31323 418 aa17.59■□□□□ 0.41
NUP85-201ENST00000245544 MAPK8IP3Q9UPT6 1336 aa17.58■□□□□ 0.4
NUP85-201ENST00000245544 PAK3O75914 559 aaPredicted RBP17.58■□□□□ 0.4
NUP85-201ENST00000245544 B4GALNT3Q6L9W6 998 aa17.58■□□□□ 0.4
NUP85-201ENST00000245544 ORAI2Q96SN7 254 aa17.58■□□□□ 0.4
NUP85-201ENST00000245544 NLRP6P59044 892 aa17.57■□□□□ 0.4
NUP85-201ENST00000245544 PHACTR3Q96KR7 559 aa17.57■□□□□ 0.4
NUP85-201ENST00000245544 TRIM35Q9UPQ4 493 aa17.57■□□□□ 0.4
NUP85-201ENST00000245544 HSP90AB2PQ58FF8 381 aa17.57■□□□□ 0.4
NUP85-201ENST00000245544 WDR63Q8IWG1 891 aa17.57■□□□□ 0.4
NUP85-201ENST00000245544 MARF1Q9Y4F3 1742 aaKnown RBP17.57■□□□□ 0.4
NUP85-201ENST00000245544 MAP3K19Q56UN5 1328 aa17.56■□□□□ 0.4
NUP85-201ENST00000245544 EIF4A2Q14240 407 aaKnown RBP17.56■□□□□ 0.4
NUP85-201ENST00000245544 LMTK3Q96Q04 1460 aa17.56■□□□□ 0.4
NUP85-201ENST00000245544 ABTB2Q8N961 1025 aa17.56■□□□□ 0.4
NUP85-201ENST00000245544 RIPK4P57078 832 aa17.55■□□□□ 0.4
NUP85-201ENST00000245544 NCBP3Q53F19 620 aaKnown RBP17.54■□□□□ 0.4
NUP85-201ENST00000245544 EXOC6Q8TAG9 804 aa17.54■□□□□ 0.4
NUP85-201ENST00000245544 PNNQ9H307 717 aaKnown RBP17.53■□□□□ 0.4
NUP85-201ENST00000245544 TMEM94Q12767 1356 aa17.53■□□□□ 0.4
NUP85-201ENST00000245544 XPCQ01831 940 aaPredicted RBP17.53■□□□□ 0.4
NUP85-201ENST00000245544 PSME1Q06323 249 aa17.53■□□□□ 0.4
NUP85-201ENST00000245544 C20orf194Q5TEA3 1177 aa17.53■□□□□ 0.4
NUP85-201ENST00000245544 C19orf44Q9H6X5 657 aa17.53■□□□□ 0.4
NUP85-201ENST00000245544 FOXO3O43524 673 aa17.52■□□□□ 0.4
NUP85-201ENST00000245544 AEBP1Q8IUX7 1158 aa17.52■□□□□ 0.4
NUP85-201ENST00000245544 STRCQ7RTU9 1775 aa17.52■□□□□ 0.39
NUP85-201ENST00000245544 BCAR3O75815 825 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms