RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 ZNF692Q9BU19 519 aaPredicted RBP22.83■■□□□ 1.25
CDKN1A-201ENST00000244741 PSME1Q06323 249 aa22.83■■□□□ 1.24
CDKN1A-201ENST00000244741 ZRANB1Q9UGI0 708 aa22.83■■□□□ 1.24
CDKN1A-201ENST00000244741 POLR3AO14802 1390 aaPredicted RBP22.82■■□□□ 1.24
CDKN1A-201ENST00000244741 PAK3O75914 559 aaPredicted RBP22.82■■□□□ 1.24
CDKN1A-201ENST00000244741 NME9Q86XW9 330 aa22.82■■□□□ 1.24
CDKN1A-201ENST00000244741 CGNL1Q0VF96 1302 aa22.82■■□□□ 1.24
CDKN1A-201ENST00000244741 TNNT2P45379 298 aaPredicted RBP22.82■■□□□ 1.24
CDKN1A-201ENST00000244741 BRINP3Q76B58 766 aa22.81■■□□□ 1.24
CDKN1A-201ENST00000244741 AKAP12Q02952 1782 aa22.81■■□□□ 1.24
CDKN1A-201ENST00000244741 USP6P35125 1406 aa22.81■■□□□ 1.24
CDKN1A-201ENST00000244741 FYB1O15117 783 aa22.8■■□□□ 1.24
CDKN1A-201ENST00000244741 PLEKHG5O94827 1062 aa22.79■■□□□ 1.24
CDKN1A-201ENST00000244741 NUTM2GQ5VZR2 741 aa22.79■■□□□ 1.24
CDKN1A-201ENST00000244741 TTC21BQ7Z4L5 1316 aa22.79■■□□□ 1.24
CDKN1A-201ENST00000244741 EDC4Q6P2E9 1401 aaKnown RBP22.78■■□□□ 1.24
CDKN1A-201ENST00000244741 MON2Q7Z3U7 1717 aa22.77■■□□□ 1.24
CDKN1A-201ENST00000244741 PIP4K2BP78356 416 aa22.76■■□□□ 1.23
CDKN1A-201ENST00000244741 KRT28Q7Z3Y7 464 aa22.76■■□□□ 1.23
CDKN1A-201ENST00000244741 LMOD2Q6P5Q4 547 aa22.75■■□□□ 1.23
CDKN1A-201ENST00000244741 MORC1Q86VD1 984 aa22.75■■□□□ 1.23
CDKN1A-201ENST00000244741 ZBED9Q6R2W3 1325 aa22.75■■□□□ 1.23
CDKN1A-201ENST00000244741 FBLN1P23142 703 aa22.74■■□□□ 1.23
CDKN1A-201ENST00000244741 CERKQ8TCT0 537 aa22.74■■□□□ 1.23
CDKN1A-201ENST00000244741 UBAP1LF5GYI3 381 aa22.73■■□□□ 1.23
CDKN1A-201ENST00000244741 PARD3Q8TEW0 1356 aa22.73■■□□□ 1.23
CDKN1A-201ENST00000244741 SSH2Q76I76 1423 aa22.73■■□□□ 1.23
CDKN1A-201ENST00000244741 SOX12O15370 315 aa22.72■■□□□ 1.23
CDKN1A-201ENST00000244741 IRX6P78412 446 aaPredicted RBP22.72■■□□□ 1.23
CDKN1A-201ENST00000244741 ABTB2Q8N961 1025 aa22.72■■□□□ 1.23
CDKN1A-201ENST00000244741 NRKQ7Z2Y5 1582 aa22.72■■□□□ 1.23
CDKN1A-201ENST00000244741 RALBP1Q15311 655 aa22.71■■□□□ 1.23
CDKN1A-201ENST00000244741 KIF1AQ12756 1690 aa22.7■■□□□ 1.23
CDKN1A-201ENST00000244741 NPC1L1Q9UHC9 1359 aa22.7■■□□□ 1.22
CDKN1A-201ENST00000244741 NPHP3Q7Z494 1330 aa22.7■■□□□ 1.22
CDKN1A-201ENST00000244741 TOM1O60784 492 aa22.69■■□□□ 1.22
CDKN1A-201ENST00000244741 KIF20BQ96Q89 1820 aa22.69■■□□□ 1.22
CDKN1A-201ENST00000244741 NLRP6P59044 892 aa22.69■■□□□ 1.22
CDKN1A-201ENST00000244741 COG3Q96JB2 828 aa22.68■■□□□ 1.22
CDKN1A-201ENST00000244741 TTC21AQ8NDW8 1320 aa22.67■■□□□ 1.22
CDKN1A-201ENST00000244741 PPP2R1AP30153 589 aa22.67■■□□□ 1.22
CDKN1A-201ENST00000244741 MYBBP1AQ9BQG0 1328 aaKnown RBP22.67■■□□□ 1.22
CDKN1A-201ENST00000244741 ROBO1Q9Y6N7 1651 aa22.66■■□□□ 1.22
CDKN1A-201ENST00000244741 NSD2O96028 1365 aa22.66■■□□□ 1.22
CDKN1A-201ENST00000244741 PIK3C2AO00443 1686 aa22.65■■□□□ 1.22
CDKN1A-201ENST00000244741 PXDNQ92626 1479 aa22.63■■□□□ 1.21
CDKN1A-201ENST00000244741 PPM1GO15355 546 aaPredicted RBP22.62■■□□□ 1.21
CDKN1A-201ENST00000244741 RRS1Q15050 365 aaKnown RBP22.62■■□□□ 1.21
CDKN1A-201ENST00000244741 TRPM3Q9HCF6 1732 aaPredicted RBP22.61■■□□□ 1.21
CDKN1A-201ENST00000244741 PNISRQ8TF01 805 aaKnown RBP22.61■■□□□ 1.21
CDKN1A-201ENST00000244741 OVOS2A0A0J9YW53 1432 aa22.6■■□□□ 1.21
CDKN1A-201ENST00000244741 OVOS2Q6IE36 1432 aa22.6■■□□□ 1.21
CDKN1A-201ENST00000244741 CABLES1Q8TDN4 633 aa22.6■■□□□ 1.21
CDKN1A-201ENST00000244741 SOS2Q07890 1332 aaPredicted RBP22.6■■□□□ 1.21
CDKN1A-201ENST00000244741 NLRP13Q86W25 1043 aa22.59■■□□□ 1.21
CDKN1A-201ENST00000244741 ANKRD26Q9UPS8 1709 aa22.59■■□□□ 1.21
CDKN1A-201ENST00000244741 MTHFSP49914 203 aa22.59■■□□□ 1.21
CDKN1A-201ENST00000244741 ERICH6BQ5W0A0 696 aa22.59■■□□□ 1.21
CDKN1A-201ENST00000244741 SPATA31A3Q5VYP0 1347 aa22.59■■□□□ 1.21
CDKN1A-201ENST00000244741 EMILIN1Q9Y6C2 1016 aa22.57■■□□□ 1.2
CDKN1A-201ENST00000244741 BRD4O60885 1362 aaPredicted RBP22.57■■□□□ 1.2
CDKN1A-201ENST00000244741 TNS3Q68CZ2 1445 aa22.56■■□□□ 1.2
CDKN1A-201ENST00000244741 SBNO1A3KN83 1393 aa22.56■■□□□ 1.2
CDKN1A-201ENST00000244741 USP31Q70CQ4 1352 aa22.56■■□□□ 1.2
CDKN1A-201ENST00000244741 ZBTB7CA1YPR0 619 aa22.56■■□□□ 1.2
CDKN1A-201ENST00000244741 NHSL1Q5SYE7 1610 aa22.56■■□□□ 1.2
CDKN1A-201ENST00000244741 POLKQ9UBT6 870 aa22.55■■□□□ 1.2
CDKN1A-201ENST00000244741 IQSEC2Q5JU85 1478 aa22.55■■□□□ 1.2
CDKN1A-201ENST00000244741 MARF1Q9Y4F3 1742 aaKnown RBP22.54■■□□□ 1.2
CDKN1A-201ENST00000244741 ALS2Q96Q42 1657 aa22.53■■□□□ 1.2
CDKN1A-201ENST00000244741 SMG6Q86US8 1419 aaKnown RBP22.53■■□□□ 1.2
CDKN1A-201ENST00000244741 PPP4R2Q9NY27 417 aa22.52■■□□□ 1.2
CDKN1A-201ENST00000244741 MAP2P11137 1827 aaKnown RBP22.52■■□□□ 1.2
CDKN1A-201ENST00000244741 GCP02774 474 aa22.52■■□□□ 1.2
CDKN1A-201ENST00000244741 RBM19Q9Y4C8 960 aaKnown RBP22.51■■□□□ 1.19
CDKN1A-201ENST00000244741 SENP3-EIF4A1A0A087X0R7 540 aa22.5■■□□□ 1.19
CDKN1A-201ENST00000244741 ZC3H6P61129 1189 aaKnown RBP22.5■■□□□ 1.19
CDKN1A-201ENST00000244741 MAP3K19Q56UN5 1328 aa22.5■■□□□ 1.19
CDKN1A-201ENST00000244741 LRRC59Q96AG4 307 aaKnown RBP22.49■■□□□ 1.19
CDKN1A-201ENST00000244741 ARHGEF10O15013 1369 aa22.49■■□□□ 1.19
CDKN1A-201ENST00000244741 PHLPP1O60346 1717 aa22.49■■□□□ 1.19
CDKN1A-201ENST00000244741 AHDC1Q5TGY3 1603 aaPredicted RBP22.49■■□□□ 1.19
CDKN1A-201ENST00000244741 MED1Q15648 1581 aaPredicted RBP22.48■■□□□ 1.19
CDKN1A-201ENST00000244741 NUDCQ9Y266 331 aa22.48■■□□□ 1.19
CDKN1A-201ENST00000244741 USP19O94966 1318 aa22.47■■□□□ 1.19
CDKN1A-201ENST00000244741 AATKQ6ZMQ8 1374 aa22.47■■□□□ 1.19
CDKN1A-201ENST00000244741 HAP1P54257 671 aaPredicted RBP22.46■■□□□ 1.19
CDKN1A-201ENST00000244741 AMPHP49418 695 aa22.46■■□□□ 1.19
CDKN1A-201ENST00000244741 KCNH5Q8NCM2 988 aa22.46■■□□□ 1.19
CDKN1A-201ENST00000244741 HSP90AB2PQ58FF8 381 aa22.45■■□□□ 1.18
CDKN1A-201ENST00000244741 CFAP53Q96M91 514 aa22.44■■□□□ 1.18
CDKN1A-201ENST00000244741 USP54Q70EL1 1684 aa22.44■■□□□ 1.18
CDKN1A-201ENST00000244741 NFAT5O94916 1531 aa22.43■■□□□ 1.18
CDKN1A-201ENST00000244741 COL16A1Q07092 1604 aaPredicted RBP22.43■■□□□ 1.18
CDKN1A-201ENST00000244741 SLIT3O75094 1523 aa22.42■■□□□ 1.18
CDKN1A-201ENST00000244741 HSPA1LP34931 641 aa22.42■■□□□ 1.18
CDKN1A-201ENST00000244741 PEAK1Q9H792 1746 aa22.42■■□□□ 1.18
CDKN1A-201ENST00000244741 CHRNA2Q15822 529 aa22.42■■□□□ 1.18
CDKN1A-201ENST00000244741 LTV1Q96GA3 475 aaPredicted RBP22.41■■□□□ 1.18
CDKN1A-201ENST00000244741 PNPLA6Q8IY17 1366 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms