RNA–Protein interactions for RNA: ENST00000239374.7

CCDC170-201, Transcript of coiled-coil domain containing 170, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC170, Length 5,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC170-201ENST00000239374 ZMYND15Q9H091 742 aa13.37□□□□□ -0.27
CCDC170-201ENST00000239374 DMRT2Q9Y5R5 561 aa13.37□□□□□ -0.27
CCDC170-201ENST00000239374 ERC2O15083 957 aa13.37□□□□□ -0.27
CCDC170-201ENST00000239374 MAGI3Q5TCQ9 1506 aa13.37□□□□□ -0.27
CCDC170-201ENST00000239374 ARHGEF12Q9NZN5 1544 aa13.37□□□□□ -0.27
CCDC170-201ENST00000239374 ASXL1Q8IXJ9 1541 aa13.36□□□□□ -0.27
CCDC170-201ENST00000239374 CCDC27Q2M243 656 aa13.36□□□□□ -0.27
CCDC170-201ENST00000239374 TBC1D9Q6ZT07 1266 aa13.36□□□□□ -0.27
CCDC170-201ENST00000239374 KIF14Q15058 1648 aa13.35□□□□□ -0.27
CCDC170-201ENST00000239374 MCM2P49736 904 aa13.35□□□□□ -0.27
CCDC170-201ENST00000239374 PRAM1Q96QH2 718 aa13.35□□□□□ -0.27
CCDC170-201ENST00000239374 BMP2KLQ5H9B9 411 aa13.35□□□□□ -0.27
CCDC170-201ENST00000239374 ZNF771Q7L3S4 317 aaPredicted RBP13.35□□□□□ -0.27
CCDC170-201ENST00000239374 LAMC3Q9Y6N6 1575 aa13.35□□□□□ -0.27
CCDC170-201ENST00000239374 ZMYM4Q5VZL5 1548 aa13.35□□□□□ -0.27
CCDC170-201ENST00000239374 GOLGA6L19H0YKK7 550 aa13.35□□□□□ -0.27
CCDC170-201ENST00000239374 BAG4O95429 457 aaKnown RBP13.35□□□□□ -0.27
CCDC170-201ENST00000239374 TSPYL4Q9UJ04 414 aa13.35□□□□□ -0.27
CCDC170-201ENST00000239374 HDAC1Q13547 482 aaPredicted RBP13.35□□□□□ -0.27
CCDC170-201ENST00000239374 CABP1Q9NZU7 370 aa13.34□□□□□ -0.27
CCDC170-201ENST00000239374 BLMP54132 1417 aaPredicted RBP13.34□□□□□ -0.27
CCDC170-201ENST00000239374 GRIN2AQ12879 1464 aa13.34□□□□□ -0.27
CCDC170-201ENST00000239374 FIBPO43427 364 aa13.34□□□□□ -0.27
CCDC170-201ENST00000239374 BCL11BQ9C0K0 894 aaPredicted RBP13.34□□□□□ -0.27
CCDC170-201ENST00000239374 PDCL3Q9H2J4 239 aa13.34□□□□□ -0.27
CCDC170-201ENST00000239374 DNMT1P26358 1616 aaKnown RBP13.34□□□□□ -0.27
CCDC170-201ENST00000239374 COL17A1Q9UMD9 1497 aaPredicted RBP13.34□□□□□ -0.27
CCDC170-201ENST00000239374 ZNF428Q96B54 188 aa13.34□□□□□ -0.27
CCDC170-201ENST00000239374 WDR62O43379 1518 aa13.34□□□□□ -0.27
CCDC170-201ENST00000239374 BECN2A8MW95 431 aa13.33□□□□□ -0.27
CCDC170-201ENST00000239374 ZKSCAN1P17029 563 aaPredicted RBP13.33□□□□□ -0.27
CCDC170-201ENST00000239374 HMGN5P82970 282 aaKnown RBP13.33□□□□□ -0.27
CCDC170-201ENST00000239374 FCHSD2O94868 740 aa13.33□□□□□ -0.28
CCDC170-201ENST00000239374 NGDNQ8NEJ9 315 aaKnown RBP13.33□□□□□ -0.28
CCDC170-201ENST00000239374 IFT57Q9NWB7 429 aa13.33□□□□□ -0.28
CCDC170-201ENST00000239374 GCC2Q8IWJ2 1684 aa13.33□□□□□ -0.28
CCDC170-201ENST00000239374 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.33□□□□□ -0.28
CCDC170-201ENST00000239374 EIF2S2P20042 333 aaKnown RBP13.33□□□□□ -0.28
CCDC170-201ENST00000239374 KLHL40Q2TBA0 621 aa13.33□□□□□ -0.28
CCDC170-201ENST00000239374 RBM42Q9BTD8 480 aaKnown RBP13.33□□□□□ -0.28
CCDC170-201ENST00000239374 H3BQV1 296 aa13.33□□□□□ -0.28
CCDC170-201ENST00000239374 IFFO2Q5TF58 517 aa13.33□□□□□ -0.28
CCDC170-201ENST00000239374 RUFY2Q8WXA3 655 aa13.33□□□□□ -0.28
CCDC170-201ENST00000239374 ALDH1L2Q3SY69 923 aa13.32□□□□□ -0.28
CCDC170-201ENST00000239374 BICD2Q8TD16 824 aa13.32□□□□□ -0.28
CCDC170-201ENST00000239374 SLC4A2P04920 1241 aa13.32□□□□□ -0.28
CCDC170-201ENST00000239374 PIK3C2GO75747 1445 aa13.32□□□□□ -0.28
CCDC170-201ENST00000239374 FAM135AQ9P2D6 1515 aa13.32□□□□□ -0.28
CCDC170-201ENST00000239374 ZNF608Q9ULD9 1512 aaPredicted RBP13.32□□□□□ -0.28
CCDC170-201ENST00000239374 RAPGEF6Q8TEU7 1601 aa13.32□□□□□ -0.28
CCDC170-201ENST00000239374 NUCB1Q02818 461 aa13.32□□□□□ -0.28
CCDC170-201ENST00000239374 CARD14Q9BXL6 1004 aa13.32□□□□□ -0.28
CCDC170-201ENST00000239374 SMARCA5O60264 1052 aaPredicted RBP13.31□□□□□ -0.28
CCDC170-201ENST00000239374 SPC24Q8NBT2 197 aa13.31□□□□□ -0.28
CCDC170-201ENST00000239374 CHMP4AQ9BY43 222 aa13.31□□□□□ -0.28
CCDC170-201ENST00000239374 HDAC5Q9UQL6 1122 aa13.31□□□□□ -0.28
CCDC170-201ENST00000239374 NFE2L2Q16236 605 aa13.3□□□□□ -0.28
CCDC170-201ENST00000239374 GNL2Q13823 731 aaKnown RBP13.3□□□□□ -0.28
CCDC170-201ENST00000239374 FAM184AQ8NB25 1140 aa13.3□□□□□ -0.28
CCDC170-201ENST00000239374 RBM27Q9P2N5 1060 aaKnown RBP13.3□□□□□ -0.28
CCDC170-201ENST00000239374 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.3□□□□□ -0.28
CCDC170-201ENST00000239374 SNX21Q969T3 373 aa13.3□□□□□ -0.28
CCDC170-201ENST00000239374 CDK19Q9BWU1 502 aa13.29□□□□□ -0.28
CCDC170-201ENST00000239374 NUP160Q12769 1436 aa13.29□□□□□ -0.28
CCDC170-201ENST00000239374 ABCC11Q96J66 1382 aa13.29□□□□□ -0.28
CCDC170-201ENST00000239374 RPAP2Q8IXW5 612 aaPredicted RBP13.29□□□□□ -0.28
CCDC170-201ENST00000239374 WDR33Q9C0J8 1336 aaKnown RBP13.29□□□□□ -0.28
CCDC170-201ENST00000239374 TPM4P67936 248 aa13.29□□□□□ -0.28
CCDC170-201ENST00000239374 SURF6O75683 361 aaKnown RBP13.29□□□□□ -0.28
CCDC170-201ENST00000239374 UBTFL1P0CB47 393 aaPredicted RBP13.29□□□□□ -0.28
CCDC170-201ENST00000239374 SF3A1Q15459 793 aaKnown RBP13.29□□□□□ -0.28
CCDC170-201ENST00000239374 GNAI3P08754 354 aa13.28□□□□□ -0.28
CCDC170-201ENST00000239374 UPF3BQ9BZI7 483 aaKnown RBP13.28□□□□□ -0.28
CCDC170-201ENST00000239374 INSRP06213 1382 aa13.28□□□□□ -0.28
CCDC170-201ENST00000239374 POLR3AO14802 1390 aaPredicted RBP13.28□□□□□ -0.28
CCDC170-201ENST00000239374 GNAI2P04899 355 aa13.28□□□□□ -0.28
CCDC170-201ENST00000239374 IFIT2P09913 472 aaKnown RBP13.28□□□□□ -0.28
CCDC170-201ENST00000239374 LETM1O95202 739 aaPredicted RBP13.28□□□□□ -0.28
CCDC170-201ENST00000239374 RAB3GAP1Q15042 981 aa13.28□□□□□ -0.28
CCDC170-201ENST00000239374 SULT6B1Q6IMI4 303 aa13.28□□□□□ -0.28
CCDC170-201ENST00000239374 SASS6Q6UVJ0 657 aa13.28□□□□□ -0.28
CCDC170-201ENST00000239374 SMC5Q8IY18 1101 aa13.28□□□□□ -0.28
CCDC170-201ENST00000239374 GAS2L2Q8NHY3 880 aa13.28□□□□□ -0.28
CCDC170-201ENST00000239374 SAMD9Q5K651 1589 aa13.28□□□□□ -0.28
CCDC170-201ENST00000239374 DCTN1Q14203 1278 aa13.27□□□□□ -0.28
CCDC170-201ENST00000239374 ZSCAN23Q3MJ62 389 aa13.27□□□□□ -0.28
CCDC170-201ENST00000239374 ITSN2Q9NZM3 1697 aa13.27□□□□□ -0.28
CCDC170-201ENST00000239374 C9orf78Q9NZ63 289 aaPredicted RBP13.27□□□□□ -0.28
CCDC170-201ENST00000239374 TRIM5Q9C035 493 aa13.27□□□□□ -0.29
CCDC170-201ENST00000239374 EXOC6BQ9Y2D4 811 aa13.27□□□□□ -0.29
CCDC170-201ENST00000239374 LRRCC1Q9C099 1032 aa13.27□□□□□ -0.29
CCDC170-201ENST00000239374 PRDM10Q9NQV6 1147 aa13.27□□□□□ -0.29
CCDC170-201ENST00000239374 CCDC9Q9Y3X0 531 aaKnown RBP13.27□□□□□ -0.29
CCDC170-201ENST00000239374 A2MP01023 1474 aa13.26□□□□□ -0.29
CCDC170-201ENST00000239374 ATP10BO94823 1461 aa13.26□□□□□ -0.29
CCDC170-201ENST00000239374 KIF3AQ9Y496 699 aa13.26□□□□□ -0.29
CCDC170-201ENST00000239374 TPM3P06753 285 aa13.25□□□□□ -0.29
CCDC170-201ENST00000239374 RRS1Q15050 365 aaKnown RBP13.25□□□□□ -0.29
CCDC170-201ENST00000239374 FBXW7Q969H0 707 aa13.25□□□□□ -0.29
CCDC170-201ENST00000239374 GDPD2Q9HCC8 539 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms