RNA–Protein interactions for RNA: ENST00000229201.4

TIMELESS-201, Transcript of timeless circadian regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TIMELESS, Length 4,376 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMELESS-201ENST00000229201 ALKQ9UM73 1620 aa12.9□□□□□ -0.34
TIMELESS-201ENST00000229201 RIPK4P57078 832 aa12.89□□□□□ -0.35
TIMELESS-201ENST00000229201 ZKSCAN2Q63HK3 967 aa12.89□□□□□ -0.35
TIMELESS-201ENST00000229201 TSPOAP1O95153 1857 aa12.89□□□□□ -0.35
TIMELESS-201ENST00000229201 A2ML1A8K2U0 1454 aa12.88□□□□□ -0.35
TIMELESS-201ENST00000229201 SMC4Q9NTJ3 1288 aa12.88□□□□□ -0.35
TIMELESS-201ENST00000229201 REREQ9P2R6 1566 aa12.88□□□□□ -0.35
TIMELESS-201ENST00000229201 WASLO00401 505 aaPredicted RBP12.87□□□□□ -0.35
TIMELESS-201ENST00000229201 FCHSD2O94868 740 aa12.87□□□□□ -0.35
TIMELESS-201ENST00000229201 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
TIMELESS-201ENST00000229201 RWDD1Q9H446 243 aaPredicted RBP12.87□□□□□ -0.35
TIMELESS-201ENST00000229201 ZMYM3Q14202 1370 aa12.87□□□□□ -0.35
TIMELESS-201ENST00000229201 MED14O60244 1454 aa12.87□□□□□ -0.35
TIMELESS-201ENST00000229201 IQSEC2Q5JU85 1478 aa12.87□□□□□ -0.35
TIMELESS-201ENST00000229201 TSR2Q969E8 191 aaKnown RBP12.86□□□□□ -0.35
TIMELESS-201ENST00000229201 CALD1Q05682 793 aaKnown RBP12.86□□□□□ -0.35
TIMELESS-201ENST00000229201 IL16Q14005 1332 aa12.86□□□□□ -0.35
TIMELESS-201ENST00000229201 EXOSC9Q06265 439 aaKnown RBP12.85□□□□□ -0.35
TIMELESS-201ENST00000229201 DZIP1LQ8IYY4 767 aaKnown RBP12.85□□□□□ -0.35
TIMELESS-201ENST00000229201 SHPRHQ149N8 1683 aa12.85□□□□□ -0.35
TIMELESS-201ENST00000229201 ARHGEF40Q8TER5 1519 aa12.85□□□□□ -0.35
TIMELESS-201ENST00000229201 COG3Q96JB2 828 aa12.85□□□□□ -0.35
TIMELESS-201ENST00000229201 IPO8O15397 1037 aaKnown RBP12.85□□□□□ -0.35
TIMELESS-201ENST00000229201 PLEKHF1Q96S99 279 aa12.85□□□□□ -0.35
TIMELESS-201ENST00000229201 CCDC61Q9Y6R9 512 aa12.85□□□□□ -0.35
TIMELESS-201ENST00000229201 MYO5BQ9ULV0 1848 aa12.85□□□□□ -0.35
TIMELESS-201ENST00000229201 IGHDP01880 384 aa12.85□□□□□ -0.35
TIMELESS-201ENST00000229201 NUDT16Q96DE0 195 aaKnown RBP12.84□□□□□ -0.35
TIMELESS-201ENST00000229201 CLTCQ00610 1675 aaKnown RBP12.84□□□□□ -0.35
TIMELESS-201ENST00000229201 TNRQ92752 1358 aa12.84□□□□□ -0.35
TIMELESS-201ENST00000229201 PRKAR2BP31323 418 aa12.83□□□□□ -0.35
TIMELESS-201ENST00000229201 SPATA31D1Q6ZQQ2 1576 aa12.83□□□□□ -0.35
TIMELESS-201ENST00000229201 DLC1Q96QB1 1528 aa12.83□□□□□ -0.36
TIMELESS-201ENST00000229201 LAS1LQ9Y4W2 734 aaKnown RBP12.83□□□□□ -0.36
TIMELESS-201ENST00000229201 ZNF692Q9BU19 519 aaPredicted RBP12.83□□□□□ -0.36
TIMELESS-201ENST00000229201 POLKQ9UBT6 870 aa12.83□□□□□ -0.36
TIMELESS-201ENST00000229201 ATP7BP35670 1465 aa12.83□□□□□ -0.36
TIMELESS-201ENST00000229201 MVPQ14764 893 aaKnown RBP12.83□□□□□ -0.36
TIMELESS-201ENST00000229201 SIRT1Q96EB6 747 aa12.83□□□□□ -0.36
TIMELESS-201ENST00000229201 TRIM35Q9UPQ4 493 aa12.82□□□□□ -0.36
TIMELESS-201ENST00000229201 UPF2Q9HAU5 1272 aaKnown RBP12.82□□□□□ -0.36
TIMELESS-201ENST00000229201 CD163L1Q9NR16 1453 aa12.82□□□□□ -0.36
TIMELESS-201ENST00000229201 PPIP5K1Q6PFW1 1433 aa12.82□□□□□ -0.36
TIMELESS-201ENST00000229201 DDX19BQ9UMR2 479 aa12.81□□□□□ -0.36
TIMELESS-201ENST00000229201 RLBP1P12271 317 aa12.81□□□□□ -0.36
TIMELESS-201ENST00000229201 ITPRIPQ8IWB1 547 aa12.81□□□□□ -0.36
TIMELESS-201ENST00000229201 EID1Q9Y6B2 187 aa12.81□□□□□ -0.36
TIMELESS-201ENST00000229201 PNPLA6Q8IY17 1366 aa12.81□□□□□ -0.36
TIMELESS-201ENST00000229201 C8orf34Q49A92 452 aa12.81□□□□□ -0.36
TIMELESS-201ENST00000229201 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
TIMELESS-201ENST00000229201 EDC4Q6P2E9 1401 aaKnown RBP12.81□□□□□ -0.36
TIMELESS-201ENST00000229201 LMOD3Q0VAK6 560 aa12.81□□□□□ -0.36
TIMELESS-201ENST00000229201 METP08581 1390 aa12.8□□□□□ -0.36
TIMELESS-201ENST00000229201 HMOX1P09601 288 aa12.8□□□□□ -0.36
TIMELESS-201ENST00000229201 NME9Q86XW9 330 aa12.8□□□□□ -0.36
TIMELESS-201ENST00000229201 ATF7IPQ6VMQ6 1270 aa12.8□□□□□ -0.36
TIMELESS-201ENST00000229201 SSH1Q8WYL5 1049 aa12.8□□□□□ -0.36
TIMELESS-201ENST00000229201 ZNF428Q96B54 188 aa12.79□□□□□ -0.36
TIMELESS-201ENST00000229201 CHMP4BQ9H444 224 aaKnown RBP12.79□□□□□ -0.36
TIMELESS-201ENST00000229201 NFE2L2Q16236 605 aa12.79□□□□□ -0.36
TIMELESS-201ENST00000229201 PCDHB15Q9Y5E8 787 aa12.79□□□□□ -0.36
TIMELESS-201ENST00000229201 FBLN1P23142 703 aa12.79□□□□□ -0.36
TIMELESS-201ENST00000229201 EMILIN1Q9Y6C2 1016 aa12.79□□□□□ -0.36
TIMELESS-201ENST00000229201 NLRP1Q9C000 1473 aa12.78□□□□□ -0.36
TIMELESS-201ENST00000229201 TNNQ9UQP3 1299 aa12.78□□□□□ -0.36
TIMELESS-201ENST00000229201 FAM135BQ49AJ0 1406 aa12.78□□□□□ -0.36
TIMELESS-201ENST00000229201 RSPH6AQ9H0K4 717 aa12.78□□□□□ -0.36
TIMELESS-201ENST00000229201 COL3A1P02461 1466 aaPredicted RBP12.78□□□□□ -0.36
TIMELESS-201ENST00000229201 TMEM2Q9UHN6 1383 aa12.78□□□□□ -0.36
TIMELESS-201ENST00000229201 GNAI1P63096 354 aa12.78□□□□□ -0.36
TIMELESS-201ENST00000229201 NOB1Q9ULX3 412 aaKnown RBP12.78□□□□□ -0.36
TIMELESS-201ENST00000229201 TRIM27P14373 513 aa12.77□□□□□ -0.37
TIMELESS-201ENST00000229201 ALDH1L2Q3SY69 923 aa12.77□□□□□ -0.37
TIMELESS-201ENST00000229201 USP35Q9P2H5 1018 aa12.77□□□□□ -0.37
TIMELESS-201ENST00000229201 ADGRB2O60241 1585 aa12.77□□□□□ -0.37
TIMELESS-201ENST00000229201 PDZRN3Q9UPQ7 1066 aa12.76□□□□□ -0.37
TIMELESS-201ENST00000229201 DEKP35659 375 aaKnown RBP12.76□□□□□ -0.37
TIMELESS-201ENST00000229201 BECN1Q14457 450 aa12.75□□□□□ -0.37
TIMELESS-201ENST00000229201 CPSF1Q10570 1443 aaKnown RBP12.75□□□□□ -0.37
TIMELESS-201ENST00000229201 RRS1Q15050 365 aaKnown RBP12.75□□□□□ -0.37
TIMELESS-201ENST00000229201 AATKQ6ZMQ8 1374 aa12.74□□□□□ -0.37
TIMELESS-201ENST00000229201 NUTM2FA1L443 756 aa12.74□□□□□ -0.37
TIMELESS-201ENST00000229201 IL13P35225 146 aa12.74□□□□□ -0.37
TIMELESS-201ENST00000229201 ZRANB1Q9UGI0 708 aa12.74□□□□□ -0.37
TIMELESS-201ENST00000229201 NCKAP5LQ9HCH0 1330 aa12.74□□□□□ -0.37
TIMELESS-201ENST00000229201 HAP1P54257 671 aaPredicted RBP12.74□□□□□ -0.37
TIMELESS-201ENST00000229201 PHACTR3Q96KR7 559 aa12.74□□□□□ -0.37
TIMELESS-201ENST00000229201 IFT57Q9NWB7 429 aa12.73□□□□□ -0.37
TIMELESS-201ENST00000229201 ANKRD26Q9UPS8 1709 aa12.73□□□□□ -0.37
TIMELESS-201ENST00000229201 SLC4A3P48751 1232 aa12.73□□□□□ -0.37
TIMELESS-201ENST00000229201 SLC26A8Q96RN1 970 aa12.73□□□□□ -0.37
TIMELESS-201ENST00000229201 TECPR2O15040 1411 aa12.72□□□□□ -0.37
TIMELESS-201ENST00000229201 TMEM57Q8N5G2 664 aa12.72□□□□□ -0.37
TIMELESS-201ENST00000229201 HDAC1Q13547 482 aaPredicted RBP12.72□□□□□ -0.37
TIMELESS-201ENST00000229201 THUMPD2Q9BTF0 503 aaKnown RBP12.71□□□□□ -0.37
TIMELESS-201ENST00000229201 ELL2O00472 640 aaPredicted RBP12.71□□□□□ -0.37
TIMELESS-201ENST00000229201 CEBPAP49715 358 aaPredicted RBP12.71□□□□□ -0.37
TIMELESS-201ENST00000229201 KIF20BQ96Q89 1820 aa12.71□□□□□ -0.38
TIMELESS-201ENST00000229201 CDK12Q9NYV4 1490 aaPredicted RBP12.71□□□□□ -0.38
TIMELESS-201ENST00000229201 ACEP12821 1306 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms