RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 CHMP4BQ9H444 224 aaKnown RBP14.28□□□□□ -0.12
CCND1-201ENST00000227507 PZPP20742 1482 aa14.28□□□□□ -0.12
CCND1-201ENST00000227507 NASPP49321 788 aaPredicted RBP14.27□□□□□ -0.12
CCND1-201ENST00000227507 LNPKQ9C0E8 428 aa14.27□□□□□ -0.12
CCND1-201ENST00000227507 ADCY10Q96PN6 1610 aa14.27□□□□□ -0.12
CCND1-201ENST00000227507 FOXD4L5Q5VV16 416 aaPredicted RBP14.27□□□□□ -0.13
CCND1-201ENST00000227507 FOXD4L4Q8WXT5 416 aaPredicted RBP14.27□□□□□ -0.13
CCND1-201ENST00000227507 SCAF11Q99590 1463 aaKnown RBP14.26□□□□□ -0.13
CCND1-201ENST00000227507 TULP1O00294 542 aaPredicted RBP14.26□□□□□ -0.13
CCND1-201ENST00000227507 NAP1L2Q9ULW6 460 aaPredicted RBP14.26□□□□□ -0.13
CCND1-201ENST00000227507 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
CCND1-201ENST00000227507 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
CCND1-201ENST00000227507 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
CCND1-201ENST00000227507 RLBP1P12271 317 aa14.25□□□□□ -0.13
CCND1-201ENST00000227507 ANTXR1Q9H6X2 564 aa14.25□□□□□ -0.13
CCND1-201ENST00000227507 MAST1Q9Y2H9 1570 aa14.25□□□□□ -0.13
CCND1-201ENST00000227507 SHROOM2Q13796 1616 aa14.25□□□□□ -0.13
CCND1-201ENST00000227507 BBXQ8WY36 941 aaPredicted RBP14.25□□□□□ -0.13
CCND1-201ENST00000227507 TESK2Q96S53 571 aa14.25□□□□□ -0.13
CCND1-201ENST00000227507 NPHP1O15259 732 aa14.25□□□□□ -0.13
CCND1-201ENST00000227507 MTHFSP49914 203 aa14.24□□□□□ -0.13
CCND1-201ENST00000227507 C1orf141Q5JVX7 400 aa14.24□□□□□ -0.13
CCND1-201ENST00000227507 MEX3CQ5U5Q3 659 aaKnown RBP14.24□□□□□ -0.13
CCND1-201ENST00000227507 ARAP3Q8WWN8 1544 aa14.24□□□□□ -0.13
CCND1-201ENST00000227507 WWC1Q8IX03 1113 aa14.24□□□□□ -0.13
CCND1-201ENST00000227507 RALGAPBQ86X10 1494 aa14.24□□□□□ -0.13
CCND1-201ENST00000227507 ADGBQ8N7X0 1667 aa14.24□□□□□ -0.13
CCND1-201ENST00000227507 WASLO00401 505 aaPredicted RBP14.24□□□□□ -0.13
CCND1-201ENST00000227507 AMER1Q5JTC6 1135 aaPredicted RBP14.24□□□□□ -0.13
CCND1-201ENST00000227507 TCP11L2Q8N4U5 519 aa14.24□□□□□ -0.13
CCND1-201ENST00000227507 TNPO1Q92973 898 aaKnown RBP14.24□□□□□ -0.13
CCND1-201ENST00000227507 TPM2P07951 284 aa14.23□□□□□ -0.13
CCND1-201ENST00000227507 RBM33Q96EV2 1170 aaKnown RBP14.23□□□□□ -0.13
CCND1-201ENST00000227507 HSPA2P54652 639 aa14.23□□□□□ -0.13
CCND1-201ENST00000227507 PDCL3Q9H2J4 239 aa14.23□□□□□ -0.13
CCND1-201ENST00000227507 DZIP1LQ8IYY4 767 aaKnown RBP14.22□□□□□ -0.13
CCND1-201ENST00000227507 MPNDQ8N594 471 aa14.22□□□□□ -0.13
CCND1-201ENST00000227507 IPO8O15397 1037 aaKnown RBP14.22□□□□□ -0.13
CCND1-201ENST00000227507 ZKSCAN2Q63HK3 967 aa14.22□□□□□ -0.13
CCND1-201ENST00000227507 NLRP2Q9NX02 1062 aa14.22□□□□□ -0.13
CCND1-201ENST00000227507 ERBB4Q15303 1308 aa14.22□□□□□ -0.13
CCND1-201ENST00000227507 RAPGEF4Q8WZA2 1011 aa14.22□□□□□ -0.13
CCND1-201ENST00000227507 NKTRP30414 1462 aaKnown RBP14.22□□□□□ -0.13
CCND1-201ENST00000227507 RARSP54136 660 aaKnown RBP14.22□□□□□ -0.13
CCND1-201ENST00000227507 STK31Q9BXU1 1019 aa14.22□□□□□ -0.13
CCND1-201ENST00000227507 PLCB2Q00722 1185 aa14.21□□□□□ -0.13
CCND1-201ENST00000227507 TSR2Q969E8 191 aaKnown RBP14.21□□□□□ -0.13
CCND1-201ENST00000227507 PRDM10Q9NQV6 1147 aa14.21□□□□□ -0.13
CCND1-201ENST00000227507 APBB1O00213 710 aa14.21□□□□□ -0.13
CCND1-201ENST00000227507 TEFQ10587 303 aa14.21□□□□□ -0.13
CCND1-201ENST00000227507 ZHX1Q9UKY1 873 aaPredicted RBP14.21□□□□□ -0.13
CCND1-201ENST00000227507 UHRF1BP1Q6BDS2 1440 aa14.21□□□□□ -0.13
CCND1-201ENST00000227507 HECW2Q9P2P5 1572 aa14.21□□□□□ -0.14
CCND1-201ENST00000227507 FSD2A1L4K1 749 aa14.21□□□□□ -0.14
CCND1-201ENST00000227507 MCTP1Q6DN14 999 aa14.21□□□□□ -0.14
CCND1-201ENST00000227507 GAS2L3Q86XJ1 694 aa14.21□□□□□ -0.14
CCND1-201ENST00000227507 ANKRD45Q5TZF3 282 aa14.2□□□□□ -0.14
CCND1-201ENST00000227507 CAVIN1Q6NZI2 390 aaKnown RBP14.2□□□□□ -0.14
CCND1-201ENST00000227507 PHF8Q9UPP1 1060 aa14.2□□□□□ -0.14
CCND1-201ENST00000227507 SKOR2Q2VWA4 1001 aaPredicted RBP14.2□□□□□ -0.14
CCND1-201ENST00000227507 NGEFQ8N5V2 710 aa14.2□□□□□ -0.14
CCND1-201ENST00000227507 PRAG1Q86YV5 1406 aa14.2□□□□□ -0.14
CCND1-201ENST00000227507 FOXD4L6Q3SYB3 417 aaPredicted RBP14.2□□□□□ -0.14
CCND1-201ENST00000227507 FOXD4L3Q6VB84 417 aaPredicted RBP14.2□□□□□ -0.14
CCND1-201ENST00000227507 PIP4K2BP78356 416 aa14.19□□□□□ -0.14
CCND1-201ENST00000227507 ZNF330Q9Y3S2 320 aaPredicted RBP14.19□□□□□ -0.14
CCND1-201ENST00000227507 ARHGEF12Q9NZN5 1544 aa14.19□□□□□ -0.14
CCND1-201ENST00000227507 XPCQ01831 940 aaPredicted RBP14.19□□□□□ -0.14
CCND1-201ENST00000227507 CADPS2Q86UW7 1296 aa14.19□□□□□ -0.14
CCND1-201ENST00000227507 CDC42BPAQ5VT25 1732 aa14.19□□□□□ -0.14
CCND1-201ENST00000227507 RNF214Q8ND24 703 aa14.19□□□□□ -0.14
CCND1-201ENST00000227507 NPATQ14207 1427 aa14.19□□□□□ -0.14
CCND1-201ENST00000227507 CFAP65Q6ZU64 1925 aaKnown RBP14.18□□□□□ -0.14
CCND1-201ENST00000227507 HMOX1P09601 288 aa14.18□□□□□ -0.14
CCND1-201ENST00000227507 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.18□□□□□ -0.14
CCND1-201ENST00000227507 BLMP54132 1417 aaPredicted RBP14.18□□□□□ -0.14
CCND1-201ENST00000227507 RUNDC1Q96C34 613 aa14.18□□□□□ -0.14
CCND1-201ENST00000227507 GCC2Q8IWJ2 1684 aa14.18□□□□□ -0.14
CCND1-201ENST00000227507 ZSCAN30Q86W11 494 aa14.17□□□□□ -0.14
CCND1-201ENST00000227507 TBX22Q9Y458 520 aa14.17□□□□□ -0.14
CCND1-201ENST00000227507 FOXO3O43524 673 aa14.17□□□□□ -0.14
CCND1-201ENST00000227507 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
CCND1-201ENST00000227507 KDM5CP41229 1560 aa14.17□□□□□ -0.14
CCND1-201ENST00000227507 SSFA2P28290 1259 aa14.17□□□□□ -0.14
CCND1-201ENST00000227507 CCDC173Q0VFZ6 552 aa14.16□□□□□ -0.14
CCND1-201ENST00000227507 NCKAP5LQ9HCH0 1330 aa14.16□□□□□ -0.14
CCND1-201ENST00000227507 RIPK4P57078 832 aa14.16□□□□□ -0.14
CCND1-201ENST00000227507 ELL2O00472 640 aaPredicted RBP14.16□□□□□ -0.14
CCND1-201ENST00000227507 RBM42Q9BTD8 480 aaKnown RBP14.16□□□□□ -0.14
CCND1-201ENST00000227507 PRDM11Q9NQV5 511 aa14.16□□□□□ -0.14
CCND1-201ENST00000227507 ABCA9Q8IUA7 1624 aa14.16□□□□□ -0.14
CCND1-201ENST00000227507 ZMYM4Q5VZL5 1548 aa14.15□□□□□ -0.14
CCND1-201ENST00000227507 MVPQ14764 893 aaKnown RBP14.15□□□□□ -0.14
CCND1-201ENST00000227507 UQCRHLA0A096LP55 91 aa14.15□□□□□ -0.14
CCND1-201ENST00000227507 UQCRHP07919 91 aa14.15□□□□□ -0.14
CCND1-201ENST00000227507 NOL8Q76FK4 1167 aaKnown RBP14.14□□□□□ -0.15
CCND1-201ENST00000227507 MSH6P52701 1360 aa14.14□□□□□ -0.15
CCND1-201ENST00000227507 BRD2P25440 801 aaKnown RBP14.14□□□□□ -0.15
CCND1-201ENST00000227507 C1orf115Q9H7X2 142 aa14.14□□□□□ -0.15
CCND1-201ENST00000227507 EXOSC9Q06265 439 aaKnown RBP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 97.8 ms