RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 NGLY1Q96IV0 654 aa17.84■□□□□ 0.45
LSM5-201ENST00000223084 HAP1P54257 671 aaPredicted RBP17.83■□□□□ 0.44
LSM5-201ENST00000223084 TMC1Q8TDI8 760 aa17.82■□□□□ 0.44
LSM5-201ENST00000223084 USP6P35125 1406 aa17.81■□□□□ 0.44
LSM5-201ENST00000223084 ZNF772Q68DY9 489 aaPredicted RBP17.8■□□□□ 0.44
LSM5-201ENST00000223084 SLC12A5Q9H2X9 1139 aa17.8■□□□□ 0.44
LSM5-201ENST00000223084 ABCA3Q99758 1704 aa17.8■□□□□ 0.44
LSM5-201ENST00000223084 MARF1Q9Y4F3 1742 aaKnown RBP17.8■□□□□ 0.44
LSM5-201ENST00000223084 TMF1P82094 1093 aa17.79■□□□□ 0.44
LSM5-201ENST00000223084 ABTB2Q8N961 1025 aa17.79■□□□□ 0.44
LSM5-201ENST00000223084 PUS7Q96PZ0 661 aaKnown RBP17.78■□□□□ 0.44
LSM5-201ENST00000223084 AKAP12Q02952 1782 aa17.78■□□□□ 0.44
LSM5-201ENST00000223084 SLC24A1O60721 1099 aa17.77■□□□□ 0.44
LSM5-201ENST00000223084 HSPA5P11021 654 aaKnown RBP17.77■□□□□ 0.44
LSM5-201ENST00000223084 ZNF692Q9BU19 519 aaPredicted RBP17.77■□□□□ 0.44
LSM5-201ENST00000223084 USP21Q9UK80 565 aa17.77■□□□□ 0.44
LSM5-201ENST00000223084 CPSF1Q10570 1443 aaKnown RBP17.77■□□□□ 0.44
LSM5-201ENST00000223084 SSH2Q76I76 1423 aa17.76■□□□□ 0.43
LSM5-201ENST00000223084 EIF4G2P78344 907 aaKnown RBP eCLIP17.76■□□□□ 0.43
LSM5-201ENST00000223084 FNBP4Q8N3X1 1017 aaPredicted RBP17.76■□□□□ 0.43
LSM5-201ENST00000223084 KTN1Q86UP2 1357 aaKnown RBP17.76■□□□□ 0.43
LSM5-201ENST00000223084 CD163L1Q9NR16 1453 aa17.75■□□□□ 0.43
LSM5-201ENST00000223084 CRYBG1Q9Y4K1 1723 aa17.75■□□□□ 0.43
LSM5-201ENST00000223084 FAM83GA6ND36 823 aa17.75■□□□□ 0.43
LSM5-201ENST00000223084 QTRT2Q9H974 415 aaKnown RBP17.75■□□□□ 0.43
LSM5-201ENST00000223084 BRD4O60885 1362 aaPredicted RBP17.75■□□□□ 0.43
LSM5-201ENST00000223084 TTC21BQ7Z4L5 1316 aa17.74■□□□□ 0.43
LSM5-201ENST00000223084 NLRP6P59044 892 aa17.73■□□□□ 0.43
LSM5-201ENST00000223084 HDGFL2Q7Z4V5 671 aaPredicted RBP17.73■□□□□ 0.43
LSM5-201ENST00000223084 NLRP13Q86W25 1043 aa17.73■□□□□ 0.43
LSM5-201ENST00000223084 BCL9LQ86UU0 1499 aa17.73■□□□□ 0.43
LSM5-201ENST00000223084 ZC3H6P61129 1189 aaKnown RBP17.72■□□□□ 0.43
LSM5-201ENST00000223084 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.72■□□□□ 0.43
LSM5-201ENST00000223084 MON2Q7Z3U7 1717 aa17.72■□□□□ 0.43
LSM5-201ENST00000223084 PHRF1Q9P1Y6 1649 aaKnown RBP17.72■□□□□ 0.43
LSM5-201ENST00000223084 USP19O94966 1318 aa17.72■□□□□ 0.43
LSM5-201ENST00000223084 A0A1W2PP64 1363 aa17.71■□□□□ 0.43
LSM5-201ENST00000223084 RXRBP28702 533 aa17.71■□□□□ 0.43
LSM5-201ENST00000223084 TERF2IPQ9NYB0 399 aa17.71■□□□□ 0.43
LSM5-201ENST00000223084 SLIT2O94813 1529 aa17.71■□□□□ 0.43
LSM5-201ENST00000223084 PIK3C2AO00443 1686 aa17.71■□□□□ 0.42
LSM5-201ENST00000223084 NRKQ7Z2Y5 1582 aa17.7■□□□□ 0.42
LSM5-201ENST00000223084 CDCA8Q53HL2 280 aa17.7■□□□□ 0.42
LSM5-201ENST00000223084 ZRANB1Q9UGI0 708 aa17.7■□□□□ 0.42
LSM5-201ENST00000223084 TRPC5Q9UL62 973 aaPredicted RBP17.7■□□□□ 0.42
LSM5-201ENST00000223084 TTC21AQ8NDW8 1320 aa17.7■□□□□ 0.42
LSM5-201ENST00000223084 KIAA0232Q92628 1395 aa17.69■□□□□ 0.42
LSM5-201ENST00000223084 NINLQ9Y2I6 1382 aa17.69■□□□□ 0.42
LSM5-201ENST00000223084 PLCH1Q4KWH8 1693 aa17.69■□□□□ 0.42
LSM5-201ENST00000223084 CHRNA2Q15822 529 aa17.69■□□□□ 0.42
LSM5-201ENST00000223084 NME9Q86XW9 330 aa17.69■□□□□ 0.42
LSM5-201ENST00000223084 UNC5CLQ8IV45 518 aa17.69■□□□□ 0.42
LSM5-201ENST00000223084 PRDM11Q9NQV5 511 aa17.69■□□□□ 0.42
LSM5-201ENST00000223084 ATRNO75882 1429 aa17.69■□□□□ 0.42
LSM5-201ENST00000223084 GCP02774 474 aa17.68■□□□□ 0.42
LSM5-201ENST00000223084 POLR3GLQ9BT43 218 aa17.68■□□□□ 0.42
LSM5-201ENST00000223084 RBM6P78332 1123 aaKnown RBP17.67■□□□□ 0.42
LSM5-201ENST00000223084 BTG4Q9NY30 223 aa17.67■□□□□ 0.42
LSM5-201ENST00000223084 EDC4Q6P2E9 1401 aaKnown RBP17.66■□□□□ 0.42
LSM5-201ENST00000223084 SOX12O15370 315 aa17.66■□□□□ 0.42
LSM5-201ENST00000223084 COL14A1Q05707 1796 aaKnown RBP17.66■□□□□ 0.42
LSM5-201ENST00000223084 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.65■□□□□ 0.42
LSM5-201ENST00000223084 ZBTB7CA1YPR0 619 aa17.65■□□□□ 0.42
LSM5-201ENST00000223084 ANKRD36BQ8N2N9 1353 aa17.65■□□□□ 0.42
LSM5-201ENST00000223084 NWD2Q9ULI1 1742 aa17.64■□□□□ 0.41
LSM5-201ENST00000223084 SLIT3O75094 1523 aa17.64■□□□□ 0.41
LSM5-201ENST00000223084 C11orf95C9JLR9 678 aaPredicted RBP17.64■□□□□ 0.41
LSM5-201ENST00000223084 GJD4Q96KN9 370 aaPredicted RBP17.64■□□□□ 0.41
LSM5-201ENST00000223084 CCDC9Q9Y3X0 531 aaKnown RBP17.63■□□□□ 0.41
LSM5-201ENST00000223084 MYOM1P52179 1685 aa17.63■□□□□ 0.41
LSM5-201ENST00000223084 CPDO75976 1380 aa17.63■□□□□ 0.41
LSM5-201ENST00000223084 NRAPQ86VF7 1730 aa17.62■□□□□ 0.41
LSM5-201ENST00000223084 VPS72Q15906 364 aa17.62■□□□□ 0.41
LSM5-201ENST00000223084 USP31Q70CQ4 1352 aa17.62■□□□□ 0.41
LSM5-201ENST00000223084 RGS12O14924 1447 aa17.62■□□□□ 0.41
LSM5-201ENST00000223084 STRN4Q9NRL3 753 aa17.61■□□□□ 0.41
LSM5-201ENST00000223084 KCNH5Q8NCM2 988 aa17.6■□□□□ 0.41
LSM5-201ENST00000223084 CARD14Q9BXL6 1004 aa17.6■□□□□ 0.41
LSM5-201ENST00000223084 CDK12Q9NYV4 1490 aaPredicted RBP17.6■□□□□ 0.41
LSM5-201ENST00000223084 GLI3P10071 1580 aa17.6■□□□□ 0.41
LSM5-201ENST00000223084 CAMTA1Q9Y6Y1 1673 aa17.59■□□□□ 0.41
LSM5-201ENST00000223084 ARHGEF25Q86VW2 580 aa17.58■□□□□ 0.4
LSM5-201ENST00000223084 USP54Q70EL1 1684 aa17.58■□□□□ 0.4
LSM5-201ENST00000223084 LMO7Q8WWI1 1683 aa17.58■□□□□ 0.4
LSM5-201ENST00000223084 NFAT5O94916 1531 aa17.57■□□□□ 0.4
LSM5-201ENST00000223084 OVOS2A0A0J9YW53 1432 aa17.57■□□□□ 0.4
LSM5-201ENST00000223084 OVOS2Q6IE36 1432 aa17.57■□□□□ 0.4
LSM5-201ENST00000223084 EVA1CP58658 441 aa17.57■□□□□ 0.4
LSM5-201ENST00000223084 GGNBP2Q9H3C7 697 aa17.57■□□□□ 0.4
LSM5-201ENST00000223084 NSD3Q9BZ95 1437 aa17.56■□□□□ 0.4
LSM5-201ENST00000223084 AATKQ6ZMQ8 1374 aa17.56■□□□□ 0.4
LSM5-201ENST00000223084 FYB1O15117 783 aa17.56■□□□□ 0.4
LSM5-201ENST00000223084 COG3Q96JB2 828 aa17.56■□□□□ 0.4
LSM5-201ENST00000223084 AXIN2Q9Y2T1 843 aa17.56■□□□□ 0.4
LSM5-201ENST00000223084 COL18A1P39060 1754 aa17.56■□□□□ 0.4
LSM5-201ENST00000223084 KIF7Q2M1P5 1343 aa17.55■□□□□ 0.4
LSM5-201ENST00000223084 SPATA31A5Q5VU36 1347 aa17.55■□□□□ 0.4
LSM5-201ENST00000223084 SPATA31A7Q8IWB4 1347 aa17.55■□□□□ 0.4
LSM5-201ENST00000223084 FBLN1P23142 703 aa17.55■□□□□ 0.4
LSM5-201ENST00000223084 LARP1Q6PKG0 1096 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 109.8 ms