RNA–Protein interactions for RNA: ENST00000222402.7

UBE2D4-201, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE2D4, Length 3,974 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-201ENST00000222402 RRS1Q15050 365 aaKnown RBP18.76■□□□□ 0.59
UBE2D4-201ENST00000222402 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.76■□□□□ 0.59
UBE2D4-201ENST00000222402 C22orf23Q9BZE7 217 aa18.76■□□□□ 0.59
UBE2D4-201ENST00000222402 C1orf115Q9H7X2 142 aa18.76■□□□□ 0.59
UBE2D4-201ENST00000222402 EFCAB6Q5THR3 1501 aa18.76■□□□□ 0.59
UBE2D4-201ENST00000222402 PUS7Q96PZ0 661 aaKnown RBP18.76■□□□□ 0.59
UBE2D4-201ENST00000222402 HAP1P54257 671 aaPredicted RBP18.75■□□□□ 0.59
UBE2D4-201ENST00000222402 EMILIN1Q9Y6C2 1016 aa18.75■□□□□ 0.59
UBE2D4-201ENST00000222402 NME9Q86XW9 330 aa18.74■□□□□ 0.59
UBE2D4-201ENST00000222402 NGDNQ8NEJ9 315 aaKnown RBP18.74■□□□□ 0.59
UBE2D4-201ENST00000222402 EIF5BO60841 1220 aaKnown RBP18.73■□□□□ 0.59
UBE2D4-201ENST00000222402 SEC24BO95487 1268 aa18.72■□□□□ 0.59
UBE2D4-201ENST00000222402 SLC4A10Q6U841 1118 aa18.72■□□□□ 0.59
UBE2D4-201ENST00000222402 FOXD4L1Q9NU39 408 aa18.72■□□□□ 0.59
UBE2D4-201ENST00000222402 NFE2L2Q16236 605 aa18.71■□□□□ 0.59
UBE2D4-201ENST00000222402 TWISTNBQ3B726 338 aaPredicted RBP18.71■□□□□ 0.59
UBE2D4-201ENST00000222402 RNF17Q9BXT8 1623 aaKnown RBP18.71■□□□□ 0.59
UBE2D4-201ENST00000222402 NUDT16Q96DE0 195 aaKnown RBP18.71■□□□□ 0.59
UBE2D4-201ENST00000222402 ABCC11Q96J66 1382 aa18.71■□□□□ 0.59
UBE2D4-201ENST00000222402 ABCA6Q8N139 1617 aa18.71■□□□□ 0.59
UBE2D4-201ENST00000222402 CASC1Q6TDU7 716 aa18.7■□□□□ 0.58
UBE2D4-201ENST00000222402 EID1Q9Y6B2 187 aa18.7■□□□□ 0.58
UBE2D4-201ENST00000222402 IL27Q8NEV9 243 aa18.7■□□□□ 0.58
UBE2D4-201ENST00000222402 API5Q9BZZ5 524 aaKnown RBP18.7■□□□□ 0.58
UBE2D4-201ENST00000222402 CEP152O94986 1710 aa18.69■□□□□ 0.58
UBE2D4-201ENST00000222402 AMPHP49418 695 aa18.69■□□□□ 0.58
UBE2D4-201ENST00000222402 CCDC61Q9Y6R9 512 aa18.69■□□□□ 0.58
UBE2D4-201ENST00000222402 MLH3Q9UHC1 1453 aa18.69■□□□□ 0.58
UBE2D4-201ENST00000222402 IQGAP1P46940 1657 aa18.69■□□□□ 0.58
UBE2D4-201ENST00000222402 ABCA9Q8IUA7 1624 aa18.68■□□□□ 0.58
UBE2D4-201ENST00000222402 DCTN1Q14203 1278 aa18.68■□□□□ 0.58
UBE2D4-201ENST00000222402 SULT6B1Q6IMI4 303 aa18.68■□□□□ 0.58
UBE2D4-201ENST00000222402 INO80Q9ULG1 1556 aaPredicted RBP18.67■□□□□ 0.58
UBE2D4-201ENST00000222402 YTHDC2Q9H6S0 1430 aaKnown RBP18.67■□□□□ 0.58
UBE2D4-201ENST00000222402 YEATS2Q9ULM3 1422 aa18.67■□□□□ 0.58
UBE2D4-201ENST00000222402 WASLO00401 505 aaPredicted RBP18.67■□□□□ 0.58
UBE2D4-201ENST00000222402 LTV1Q96GA3 475 aaPredicted RBP18.67■□□□□ 0.58
UBE2D4-201ENST00000222402 GOLGA6L22H0YM25 854 aa18.66■□□□□ 0.58
UBE2D4-201ENST00000222402 POLKQ9UBT6 870 aa18.66■□□□□ 0.58
UBE2D4-201ENST00000222402 ZRANB1Q9UGI0 708 aa18.66■□□□□ 0.58
UBE2D4-201ENST00000222402 BRPF3Q9ULD4 1205 aa18.66■□□□□ 0.58
UBE2D4-201ENST00000222402 TRIM35Q9UPQ4 493 aa18.66■□□□□ 0.58
UBE2D4-201ENST00000222402 IL16Q14005 1332 aa18.64■□□□□ 0.57
UBE2D4-201ENST00000222402 L1TD1Q5T7N2 865 aaKnown RBP18.64■□□□□ 0.57
UBE2D4-201ENST00000222402 NCLP19338 710 aaKnown RBP18.64■□□□□ 0.57
UBE2D4-201ENST00000222402 LMOD2Q6P5Q4 547 aa18.64■□□□□ 0.57
UBE2D4-201ENST00000222402 CHD1LQ86WJ1 897 aa18.64■□□□□ 0.57
UBE2D4-201ENST00000222402 SLC26A8Q96RN1 970 aa18.64■□□□□ 0.57
UBE2D4-201ENST00000222402 ALDH1L2Q3SY69 923 aa18.64■□□□□ 0.57
UBE2D4-201ENST00000222402 STK31Q9BXU1 1019 aa18.64■□□□□ 0.57
UBE2D4-201ENST00000222402 ANP32BQ92688 251 aaKnown RBP18.63■□□□□ 0.57
UBE2D4-201ENST00000222402 CHMP5Q9NZZ3 219 aa18.63■□□□□ 0.57
UBE2D4-201ENST00000222402 PPRC1Q5VV67 1664 aaKnown RBP18.63■□□□□ 0.57
UBE2D4-201ENST00000222402 PHACTR3Q96KR7 559 aa18.63■□□□□ 0.57
UBE2D4-201ENST00000222402 ABCC3O15438 1527 aa18.62■□□□□ 0.57
UBE2D4-201ENST00000222402 NCKAP5LQ9HCH0 1330 aa18.62■□□□□ 0.57
UBE2D4-201ENST00000222402 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
UBE2D4-201ENST00000222402 NEO1Q92859 1461 aa18.62■□□□□ 0.57
UBE2D4-201ENST00000222402 FAM83GA6ND36 823 aa18.62■□□□□ 0.57
UBE2D4-201ENST00000222402 ZNF428Q96B54 188 aa18.62■□□□□ 0.57
UBE2D4-201ENST00000222402 TBC1D32Q96NH3 1257 aa18.62■□□□□ 0.57
UBE2D4-201ENST00000222402 TBC1D2Q9BYX2 928 aa18.62■□□□□ 0.57
UBE2D4-201ENST00000222402 HECW2Q9P2P5 1572 aa18.61■□□□□ 0.57
UBE2D4-201ENST00000222402 ADGRB3O60242 1522 aa18.6■□□□□ 0.57
UBE2D4-201ENST00000222402 NECTIN2Q92692 538 aa18.6■□□□□ 0.57
UBE2D4-201ENST00000222402 GCC1Q96CN9 775 aa18.6■□□□□ 0.57
UBE2D4-201ENST00000222402 HMMRO75330 724 aa18.59■□□□□ 0.57
UBE2D4-201ENST00000222402 GBP4Q96PP9 640 aa18.59■□□□□ 0.57
UBE2D4-201ENST00000222402 HDAC1Q13547 482 aaPredicted RBP18.59■□□□□ 0.57
UBE2D4-201ENST00000222402 NUTM2GQ5VZR2 741 aa18.59■□□□□ 0.57
UBE2D4-201ENST00000222402 MBIPQ9NS73 344 aa18.59■□□□□ 0.57
UBE2D4-201ENST00000222402 IFT57Q9NWB7 429 aa18.59■□□□□ 0.57
UBE2D4-201ENST00000222402 GOLGA6L3A6NEY3 463 aa18.58■□□□□ 0.57
UBE2D4-201ENST00000222402 TSPYL4Q9UJ04 414 aa18.58■□□□□ 0.57
UBE2D4-201ENST00000222402 KIDINS220Q9ULH0 1771 aa18.58■□□□□ 0.57
UBE2D4-201ENST00000222402 TSPYL6Q8N831 410 aa18.58■□□□□ 0.57
UBE2D4-201ENST00000222402 RIMS2Q9UQ26 1411 aa18.58■□□□□ 0.56
UBE2D4-201ENST00000222402 MCM10Q7L590 875 aa18.57■□□□□ 0.56
UBE2D4-201ENST00000222402 CFAP44Q96MT7 982 aa18.57■□□□□ 0.56
UBE2D4-201ENST00000222402 RSPH6AQ9H0K4 717 aa18.57■□□□□ 0.56
UBE2D4-201ENST00000222402 CFAP74Q9C0B2 1584 aa18.57■□□□□ 0.56
UBE2D4-201ENST00000222402 PLEKHF1Q96S99 279 aa18.57■□□□□ 0.56
UBE2D4-201ENST00000222402 ZBTB40Q9NUA8 1239 aa18.56■□□□□ 0.56
UBE2D4-201ENST00000222402 PPP6R1Q9UPN7 881 aa18.56■□□□□ 0.56
UBE2D4-201ENST00000222402 LMTK2Q8IWU2 1503 aa18.55■□□□□ 0.56
UBE2D4-201ENST00000222402 PPIP5K1Q6PFW1 1433 aa18.55■□□□□ 0.56
UBE2D4-201ENST00000222402 DEPDC5O75140 1603 aa18.55■□□□□ 0.56
UBE2D4-201ENST00000222402 VWDEQ8N2E2 1590 aa18.55■□□□□ 0.56
UBE2D4-201ENST00000222402 TRIM44Q96DX7 344 aaPredicted RBP18.55■□□□□ 0.56
UBE2D4-201ENST00000222402 PHF23Q9BUL5 403 aaPredicted RBP18.55■□□□□ 0.56
UBE2D4-201ENST00000222402 MIS18AQ9NYP9 233 aa18.54■□□□□ 0.56
UBE2D4-201ENST00000222402 NLRP6P59044 892 aa18.54■□□□□ 0.56
UBE2D4-201ENST00000222402 KIAA1210Q9ULL0 1709 aa18.54■□□□□ 0.56
UBE2D4-201ENST00000222402 VAMP4O75379 141 aa18.53■□□□□ 0.56
UBE2D4-201ENST00000222402 SLC4A2P04920 1241 aa18.53■□□□□ 0.56
UBE2D4-201ENST00000222402 QRICH2Q9H0J4 1663 aa18.53■□□□□ 0.56
UBE2D4-201ENST00000222402 CDC45O75419 566 aa18.53■□□□□ 0.56
UBE2D4-201ENST00000222402 TRHP20396 242 aaPredicted RBP18.53■□□□□ 0.56
UBE2D4-201ENST00000222402 C8orf58Q8NAV2 365 aa18.53■□□□□ 0.56
UBE2D4-201ENST00000222402 GLI2P10070 1586 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms