RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 ZRANB1Q9UGI0 708 aa11.81□□□□□ -0.52
CCDC113-201ENST00000219299 ZKSCAN2Q63HK3 967 aa11.81□□□□□ -0.52
CCDC113-201ENST00000219299 ORAI2Q96SN7 254 aa11.81□□□□□ -0.52
CCDC113-201ENST00000219299 PHF23Q9BUL5 403 aaPredicted RBP11.81□□□□□ -0.52
CCDC113-201ENST00000219299 DNTTIP2Q5QJE6 756 aaKnown RBP11.81□□□□□ -0.52
CCDC113-201ENST00000219299 PPIP5K1Q6PFW1 1433 aa11.81□□□□□ -0.52
CCDC113-201ENST00000219299 FCHSD2O94868 740 aa11.8□□□□□ -0.52
CCDC113-201ENST00000219299 CABLES1Q8TDN4 633 aa11.8□□□□□ -0.52
CCDC113-201ENST00000219299 ABCA9Q8IUA7 1624 aa11.8□□□□□ -0.52
CCDC113-201ENST00000219299 FKBP5Q13451 457 aaPredicted RBP11.8□□□□□ -0.52
CCDC113-201ENST00000219299 UGGT1Q9NYU2 1555 aa11.8□□□□□ -0.52
CCDC113-201ENST00000219299 COG6Q9Y2V7 657 aa11.8□□□□□ -0.52
CCDC113-201ENST00000219299 TSR2Q969E8 191 aaKnown RBP11.8□□□□□ -0.52
CCDC113-201ENST00000219299 RWDD1Q9H446 243 aaPredicted RBP11.79□□□□□ -0.52
CCDC113-201ENST00000219299 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
CCDC113-201ENST00000219299 AMER1Q5JTC6 1135 aaPredicted RBP11.79□□□□□ -0.52
CCDC113-201ENST00000219299 SPG7Q9UQ90 795 aa11.79□□□□□ -0.52
CCDC113-201ENST00000219299 GCC2Q8IWJ2 1684 aa11.79□□□□□ -0.52
CCDC113-201ENST00000219299 CASC1Q6TDU7 716 aa11.79□□□□□ -0.52
CCDC113-201ENST00000219299 NINLQ9Y2I6 1382 aa11.78□□□□□ -0.52
CCDC113-201ENST00000219299 AIMP1Q12904 312 aaKnown RBP11.78□□□□□ -0.52
CCDC113-201ENST00000219299 HSP90AB2PQ58FF8 381 aa11.78□□□□□ -0.52
CCDC113-201ENST00000219299 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
CCDC113-201ENST00000219299 LMTK3Q96Q04 1460 aa11.78□□□□□ -0.52
CCDC113-201ENST00000219299 KDM5DQ9BY66 1539 aa11.78□□□□□ -0.52
CCDC113-201ENST00000219299 RBM42Q9BTD8 480 aaKnown RBP11.78□□□□□ -0.52
CCDC113-201ENST00000219299 ANKRD36BQ8N2N9 1353 aa11.78□□□□□ -0.52
CCDC113-201ENST00000219299 THUMPD2Q9BTF0 503 aaKnown RBP11.78□□□□□ -0.52
CCDC113-201ENST00000219299 EXOSC9Q06265 439 aaKnown RBP11.78□□□□□ -0.52
CCDC113-201ENST00000219299 NEXNQ0ZGT2 675 aa11.78□□□□□ -0.52
CCDC113-201ENST00000219299 CARD14Q9BXL6 1004 aa11.78□□□□□ -0.52
CCDC113-201ENST00000219299 CDC42BPBQ9Y5S2 1711 aa11.77□□□□□ -0.53
CCDC113-201ENST00000219299 CABP4P57796 275 aa11.77□□□□□ -0.53
CCDC113-201ENST00000219299 TMPOP42166 694 aaKnown RBP11.76□□□□□ -0.53
CCDC113-201ENST00000219299 RRP1P56182 461 aaKnown RBP11.76□□□□□ -0.53
CCDC113-201ENST00000219299 PRDM15P57071 1507 aaPredicted RBP11.76□□□□□ -0.53
CCDC113-201ENST00000219299 HMMRO75330 724 aa11.76□□□□□ -0.53
CCDC113-201ENST00000219299 DCTN1Q14203 1278 aa11.76□□□□□ -0.53
CCDC113-201ENST00000219299 PUS7Q96PZ0 661 aaKnown RBP11.76□□□□□ -0.53
CCDC113-201ENST00000219299 TTC21AQ8NDW8 1320 aa11.76□□□□□ -0.53
CCDC113-201ENST00000219299 ERVK-7P63135 1459 aa11.76□□□□□ -0.53
CCDC113-201ENST00000219299 C9orf78Q9NZ63 289 aaPredicted RBP11.76□□□□□ -0.53
CCDC113-201ENST00000219299 METP08581 1390 aa11.75□□□□□ -0.53
CCDC113-201ENST00000219299 ABCC11Q96J66 1382 aa11.75□□□□□ -0.53
CCDC113-201ENST00000219299 DDX58O95786 925 aaKnown RBP11.75□□□□□ -0.53
CCDC113-201ENST00000219299 CDK11BP21127 795 aaKnown RBP11.75□□□□□ -0.53
CCDC113-201ENST00000219299 PLA2R1Q13018 1463 aa11.75□□□□□ -0.53
CCDC113-201ENST00000219299 NFE2L2Q16236 605 aa11.75□□□□□ -0.53
CCDC113-201ENST00000219299 ABCC3O15438 1527 aa11.75□□□□□ -0.53
CCDC113-201ENST00000219299 MCM10Q7L590 875 aa11.74□□□□□ -0.53
CCDC113-201ENST00000219299 EXOC6Q8TAG9 804 aa11.74□□□□□ -0.53
CCDC113-201ENST00000219299 API5Q9BZZ5 524 aaKnown RBP11.74□□□□□ -0.53
CCDC113-201ENST00000219299 EFCAB6Q5THR3 1501 aa11.74□□□□□ -0.53
CCDC113-201ENST00000219299 TWISTNBQ3B726 338 aaPredicted RBP11.74□□□□□ -0.53
CCDC113-201ENST00000219299 DZIP1LQ8IYY4 767 aaKnown RBP11.74□□□□□ -0.53
CCDC113-201ENST00000219299 DDX17Q92841 729 aaKnown RBP11.74□□□□□ -0.53
CCDC113-201ENST00000219299 PLEKHH1Q9ULM0 1364 aa11.74□□□□□ -0.53
CCDC113-201ENST00000219299 SLAIN2Q9P270 581 aa11.74□□□□□ -0.53
CCDC113-201ENST00000219299 SPATA31E1Q6ZUB1 1445 aa11.74□□□□□ -0.53
CCDC113-201ENST00000219299 CRBNQ96SW2 442 aa11.74□□□□□ -0.53
CCDC113-201ENST00000219299 EIF2AK4Q9P2K8 1649 aaKnown RBP11.74□□□□□ -0.53
CCDC113-201ENST00000219299 MIS18AQ9NYP9 233 aa11.73□□□□□ -0.53
CCDC113-201ENST00000219299 ANKRD24Q8TF21 1146 aa11.73□□□□□ -0.53
CCDC113-201ENST00000219299 PTPRTO14522 1441 aa11.73□□□□□ -0.53
CCDC113-201ENST00000219299 A0A1W2PP64 1363 aa11.73□□□□□ -0.53
CCDC113-201ENST00000219299 NSD2O96028 1365 aa11.73□□□□□ -0.53
CCDC113-201ENST00000219299 GCP02774 474 aa11.73□□□□□ -0.53
CCDC113-201ENST00000219299 GORABQ5T7V8 394 aa11.73□□□□□ -0.53
CCDC113-201ENST00000219299 HDGFL1Q5TGJ6 251 aa11.73□□□□□ -0.53
CCDC113-201ENST00000219299 KCNJ4P48050 445 aa11.73□□□□□ -0.53
CCDC113-201ENST00000219299 RIC3Q7Z5B4 369 aa11.73□□□□□ -0.53
CCDC113-201ENST00000219299 GNAT3A8MTJ3 354 aa11.72□□□□□ -0.53
CCDC113-201ENST00000219299 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
CCDC113-201ENST00000219299 POLKQ9UBT6 870 aa11.72□□□□□ -0.53
CCDC113-201ENST00000219299 KIF16BQ96L93 1317 aa11.72□□□□□ -0.53
CCDC113-201ENST00000219299 LRRC59Q96AG4 307 aaKnown RBP11.72□□□□□ -0.53
CCDC113-201ENST00000219299 PTCD1O75127 700 aaKnown RBP11.71□□□□□ -0.53
CCDC113-201ENST00000219299 HSP90AB1P08238 724 aaKnown RBP11.71□□□□□ -0.53
CCDC113-201ENST00000219299 MPRIPQ6WCQ1 1025 aa11.71□□□□□ -0.53
CCDC113-201ENST00000219299 TMX4Q9H1E5 349 aaPredicted RBP11.71□□□□□ -0.53
CCDC113-201ENST00000219299 PLXNC1O60486 1568 aa11.71□□□□□ -0.54
CCDC113-201ENST00000219299 PANK1Q8TE04 598 aa11.71□□□□□ -0.54
CCDC113-201ENST00000219299 ARHGAP31Q2M1Z3 1444 aa11.71□□□□□ -0.54
CCDC113-201ENST00000219299 PER1O15534 1290 aaPredicted RBP11.71□□□□□ -0.54
CCDC113-201ENST00000219299 CCDC30Q5VVM6 783 aa11.71□□□□□ -0.54
CCDC113-201ENST00000219299 WDR63Q8IWG1 891 aa11.71□□□□□ -0.54
CCDC113-201ENST00000219299 KAT6BQ8WYB5 2073 aa11.7□□□□□ -0.54
CCDC113-201ENST00000219299 LRRIQ1Q96JM4 1722 aa11.7□□□□□ -0.54
CCDC113-201ENST00000219299 PLEKHG1Q9ULL1 1385 aa11.7□□□□□ -0.54
CCDC113-201ENST00000219299 BTBD11A6QL63 1104 aa11.7□□□□□ -0.54
CCDC113-201ENST00000219299 C8orf37Q96NL8 207 aa11.7□□□□□ -0.54
CCDC113-201ENST00000219299 NLRP1Q9C000 1473 aa11.7□□□□□ -0.54
CCDC113-201ENST00000219299 COL17A1Q9UMD9 1497 aaPredicted RBP11.7□□□□□ -0.54
CCDC113-201ENST00000219299 TMEM94Q12767 1356 aa11.7□□□□□ -0.54
CCDC113-201ENST00000219299 SLC4A2P04920 1241 aa11.7□□□□□ -0.54
CCDC113-201ENST00000219299 TRPM2O94759 1503 aa11.69□□□□□ -0.54
CCDC113-201ENST00000219299 MSNP26038 577 aaKnown RBP11.69□□□□□ -0.54
CCDC113-201ENST00000219299 DDX19BQ9UMR2 479 aa11.69□□□□□ -0.54
CCDC113-201ENST00000219299 NPHP4O75161 1426 aaPredicted RBP11.69□□□□□ -0.54
CCDC113-201ENST00000219299 EXOC5O00471 708 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms