RNA–Protein interactions for RNA: ENST00000216492.9

CHGA-201, Transcript of chromogranin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHGA, Length 2,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-201ENST00000216492 PROSER2Q86WR7 435 aaPredicted RBP22.38■■□□□ 1.17
CHGA-201ENST00000216492 NGDNQ8NEJ9 315 aaKnown RBP22.37■■□□□ 1.17
CHGA-201ENST00000216492 BLMP54132 1417 aaPredicted RBP22.35■■□□□ 1.17
CHGA-201ENST00000216492 ANKARQ7Z5J8 1434 aa22.35■■□□□ 1.17
CHGA-201ENST00000216492 CCDC136Q96JN2 1154 aa22.35■■□□□ 1.17
CHGA-201ENST00000216492 TTC21BQ7Z4L5 1316 aa22.35■■□□□ 1.17
CHGA-201ENST00000216492 SALL2Q9Y467 1007 aaPredicted RBP22.35■■□□□ 1.17
CHGA-201ENST00000216492 COG3Q96JB2 828 aa22.34■■□□□ 1.17
CHGA-201ENST00000216492 ZRANB1Q9UGI0 708 aa22.34■■□□□ 1.17
CHGA-201ENST00000216492 LMTK3Q96Q04 1460 aa22.33■■□□□ 1.17
CHGA-201ENST00000216492 ADGRL3Q9HAR2 1447 aa22.33■■□□□ 1.16
CHGA-201ENST00000216492 NKTRP30414 1462 aaKnown RBP22.32■■□□□ 1.16
CHGA-201ENST00000216492 USP6P35125 1406 aa22.32■■□□□ 1.16
CHGA-201ENST00000216492 FBLN1P23142 703 aa22.31■■□□□ 1.16
CHGA-201ENST00000216492 TOPAZ1Q8N9V7 1692 aa22.31■■□□□ 1.16
CHGA-201ENST00000216492 RCAN3Q9UKA8 241 aa22.3■■□□□ 1.16
CHGA-201ENST00000216492 RRP1P56182 461 aaKnown RBP22.3■■□□□ 1.16
CHGA-201ENST00000216492 POLKQ9UBT6 870 aa22.29■■□□□ 1.16
CHGA-201ENST00000216492 C19orf44Q9H6X5 657 aa22.29■■□□□ 1.16
CHGA-201ENST00000216492 NWD1Q149M9 1564 aa22.28■■□□□ 1.16
CHGA-201ENST00000216492 CCDC146Q8IYE0 955 aa22.28■■□□□ 1.16
CHGA-201ENST00000216492 PHF8Q9UPP1 1060 aa22.28■■□□□ 1.16
CHGA-201ENST00000216492 ESCO1Q5FWF5 840 aa22.27■■□□□ 1.16
CHGA-201ENST00000216492 MON2Q7Z3U7 1717 aa22.27■■□□□ 1.16
CHGA-201ENST00000216492 AKAP12Q02952 1782 aa22.27■■□□□ 1.16
CHGA-201ENST00000216492 SSH2Q76I76 1423 aa22.27■■□□□ 1.16
CHGA-201ENST00000216492 PPM1GO15355 546 aaPredicted RBP22.27■■□□□ 1.16
CHGA-201ENST00000216492 TTC21AQ8NDW8 1320 aa22.27■■□□□ 1.16
CHGA-201ENST00000216492 ITSN1Q15811 1721 aa22.26■■□□□ 1.15
CHGA-201ENST00000216492 NALCNQ8IZF0 1738 aa22.26■■□□□ 1.15
CHGA-201ENST00000216492 KIF20BQ96Q89 1820 aa22.26■■□□□ 1.15
CHGA-201ENST00000216492 ANKRD26Q9UPS8 1709 aa22.25■■□□□ 1.15
CHGA-201ENST00000216492 FMN2Q9NZ56 1722 aa22.25■■□□□ 1.15
CHGA-201ENST00000216492 AATKQ6ZMQ8 1374 aa22.24■■□□□ 1.15
CHGA-201ENST00000216492 PNPLA6Q8IY17 1366 aa22.24■■□□□ 1.15
CHGA-201ENST00000216492 U2AF1L5P0DN76 240 aaPredicted RBP22.24■■□□□ 1.15
CHGA-201ENST00000216492 U2AF1Q01081 240 aaKnown RBP eCLIP22.24■■□□□ 1.15
CHGA-201ENST00000216492 RGPD8O14715 1765 aaPredicted RBP22.23■■□□□ 1.15
CHGA-201ENST00000216492 TMEM94Q12767 1356 aa22.23■■□□□ 1.15
CHGA-201ENST00000216492 APAF1O14727 1248 aa22.22■■□□□ 1.15
CHGA-201ENST00000216492 DIAPH1O60610 1272 aaKnown RBP22.22■■□□□ 1.15
CHGA-201ENST00000216492 EMILIN1Q9Y6C2 1016 aa22.22■■□□□ 1.15
CHGA-201ENST00000216492 ORAI2Q96SN7 254 aa22.21■■□□□ 1.15
CHGA-201ENST00000216492 U2SURPO15042 1029 aaKnown RBP22.21■■□□□ 1.15
CHGA-201ENST00000216492 RRS1Q15050 365 aaKnown RBP22.21■■□□□ 1.15
CHGA-201ENST00000216492 PAK3O75914 559 aaPredicted RBP22.2■■□□□ 1.14
CHGA-201ENST00000216492 PSME1Q06323 249 aa22.2■■□□□ 1.14
CHGA-201ENST00000216492 MSH5O43196 834 aa22.19■■□□□ 1.14
CHGA-201ENST00000216492 ATF3P18847 181 aa22.19■■□□□ 1.14
CHGA-201ENST00000216492 RUNDC1Q96C34 613 aa22.19■■□□□ 1.14
CHGA-201ENST00000216492 NCOA3Q9Y6Q9 1424 aa22.19■■□□□ 1.14
CHGA-201ENST00000216492 NLRP6P59044 892 aa22.18■■□□□ 1.14
CHGA-201ENST00000216492 OVOS2A0A0J9YW53 1432 aa22.18■■□□□ 1.14
CHGA-201ENST00000216492 OVOS2Q6IE36 1432 aa22.18■■□□□ 1.14
CHGA-201ENST00000216492 ERICH6Q7L0X2 663 aa22.18■■□□□ 1.14
CHGA-201ENST00000216492 ABTB2Q8N961 1025 aa22.18■■□□□ 1.14
CHGA-201ENST00000216492 NRKQ7Z2Y5 1582 aa22.17■■□□□ 1.14
CHGA-201ENST00000216492 CDCA7LQ96GN5 454 aa22.17■■□□□ 1.14
CHGA-201ENST00000216492 FOXO3O43524 673 aa22.16■■□□□ 1.14
CHGA-201ENST00000216492 NGEFQ8N5V2 710 aa22.16■■□□□ 1.14
CHGA-201ENST00000216492 STRCQ7RTU9 1775 aa22.16■■□□□ 1.14
CHGA-201ENST00000216492 SHPRHQ149N8 1683 aa22.16■■□□□ 1.14
CHGA-201ENST00000216492 COL3A1P02461 1466 aaPredicted RBP22.16■■□□□ 1.14
CHGA-201ENST00000216492 USP31Q70CQ4 1352 aa22.16■■□□□ 1.14
CHGA-201ENST00000216492 SOX12O15370 315 aa22.15■■□□□ 1.14
CHGA-201ENST00000216492 NUTM2GQ5VZR2 741 aa22.14■■□□□ 1.13
CHGA-201ENST00000216492 CADPS2Q86UW7 1296 aa22.14■■□□□ 1.13
CHGA-201ENST00000216492 TCP11L2Q8N4U5 519 aa22.14■■□□□ 1.13
CHGA-201ENST00000216492 EXOC6Q8TAG9 804 aa22.13■■□□□ 1.13
CHGA-201ENST00000216492 ZNF521Q96K83 1311 aa22.13■■□□□ 1.13
CHGA-201ENST00000216492 ZNF335Q9H4Z2 1342 aaPredicted RBP22.13■■□□□ 1.13
CHGA-201ENST00000216492 DMRT2Q9Y5R5 561 aa22.13■■□□□ 1.13
CHGA-201ENST00000216492 STRCP1A6NGW2 1772 aa22.13■■□□□ 1.13
CHGA-201ENST00000216492 C1orf167Q5SNV9 1468 aa22.12■■□□□ 1.13
CHGA-201ENST00000216492 IL13P35225 146 aa22.11■■□□□ 1.13
CHGA-201ENST00000216492 PNNQ9H307 717 aaKnown RBP22.11■■□□□ 1.13
CHGA-201ENST00000216492 MAP2P11137 1827 aaKnown RBP22.11■■□□□ 1.13
CHGA-201ENST00000216492 GOLGA2Q08379 1002 aa22.11■■□□□ 1.13
CHGA-201ENST00000216492 NEUROD2Q15784 382 aa22.11■■□□□ 1.13
CHGA-201ENST00000216492 PLEKHF1Q96S99 279 aa22.1■■□□□ 1.13
CHGA-201ENST00000216492 MSH6P52701 1360 aa22.1■■□□□ 1.13
CHGA-201ENST00000216492 FCHSD2O94868 740 aa22.1■■□□□ 1.13
CHGA-201ENST00000216492 DCCP43146 1447 aa22.1■■□□□ 1.13
CHGA-201ENST00000216492 CDK12Q9NYV4 1490 aaPredicted RBP22.1■■□□□ 1.13
CHGA-201ENST00000216492 RRP7AQ9Y3A4 280 aaKnown RBP22.09■■□□□ 1.13
CHGA-201ENST00000216492 XPCQ01831 940 aaPredicted RBP22.08■■□□□ 1.13
CHGA-201ENST00000216492 MAP3K19Q56UN5 1328 aa22.08■■□□□ 1.12
CHGA-201ENST00000216492 KRT28Q7Z3Y7 464 aa22.07■■□□□ 1.12
CHGA-201ENST00000216492 WWC1Q8IX03 1113 aa22.07■■□□□ 1.12
CHGA-201ENST00000216492 MST1RQ04912 1400 aa22.07■■□□□ 1.12
CHGA-201ENST00000216492 HSP90AB2PQ58FF8 381 aa22.07■■□□□ 1.12
CHGA-201ENST00000216492 MAPK8IP3Q9UPT6 1336 aa22.05■■□□□ 1.12
CHGA-201ENST00000216492 AMPHP49418 695 aa22.05■■□□□ 1.12
CHGA-201ENST00000216492 NCBP3Q53F19 620 aaKnown RBP22.05■■□□□ 1.12
CHGA-201ENST00000216492 PIK3C2AO00443 1686 aa22.04■■□□□ 1.12
CHGA-201ENST00000216492 HMOX1P09601 288 aa22.04■■□□□ 1.12
CHGA-201ENST00000216492 SLFN5Q08AF3 891 aa22.04■■□□□ 1.12
CHGA-201ENST00000216492 EIF4A2Q14240 407 aaKnown RBP22.04■■□□□ 1.12
CHGA-201ENST00000216492 LRRC7Q96NW7 1537 aa22.04■■□□□ 1.12
CHGA-201ENST00000216492 CCDC27Q2M243 656 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms