RNA–Protein interactions for RNA: ENST00000216294.4

SNAPC1-201, Transcript of small nuclear RNA activating complex polypeptide 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC1, Length 2,656 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC1-201ENST00000216294 POLR3AO14802 1390 aaPredicted RBP20.29■□□□□ 0.84
SNAPC1-201ENST00000216294 ANKRD36BQ8N2N9 1353 aa20.29■□□□□ 0.84
SNAPC1-201ENST00000216294 WAPLQ7Z5K2 1190 aa20.27■□□□□ 0.83
SNAPC1-201ENST00000216294 U2SURPO15042 1029 aaKnown RBP20.26■□□□□ 0.83
SNAPC1-201ENST00000216294 TRHP20396 242 aaPredicted RBP20.26■□□□□ 0.83
SNAPC1-201ENST00000216294 CEBPAP49715 358 aaPredicted RBP20.26■□□□□ 0.83
SNAPC1-201ENST00000216294 A0A1W2PP64 1363 aa20.26■□□□□ 0.83
SNAPC1-201ENST00000216294 FBLN1P23142 703 aa20.25■□□□□ 0.83
SNAPC1-201ENST00000216294 GGNBP2Q9H3C7 697 aa20.25■□□□□ 0.83
SNAPC1-201ENST00000216294 VIRMAQ69YN4 1812 aaKnown RBP20.25■□□□□ 0.83
SNAPC1-201ENST00000216294 SETD1AO15047 1707 aaKnown RBP20.24■□□□□ 0.83
SNAPC1-201ENST00000216294 PLPPR3Q6T4P5 718 aa20.24■□□□□ 0.83
SNAPC1-201ENST00000216294 NRXN3Q9Y4C0 1643 aa20.24■□□□□ 0.83
SNAPC1-201ENST00000216294 METP08581 1390 aa20.23■□□□□ 0.83
SNAPC1-201ENST00000216294 CDK19Q9BWU1 502 aa20.23■□□□□ 0.83
SNAPC1-201ENST00000216294 USP32Q8NFA0 1604 aa20.23■□□□□ 0.83
SNAPC1-201ENST00000216294 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.23■□□□□ 0.83
SNAPC1-201ENST00000216294 ATAD2Q6PL18 1390 aa20.22■□□□□ 0.83
SNAPC1-201ENST00000216294 NLRP1Q9C000 1473 aa20.22■□□□□ 0.83
SNAPC1-201ENST00000216294 EXOSC9Q06265 439 aaKnown RBP20.21■□□□□ 0.83
SNAPC1-201ENST00000216294 MAPK8IP3Q9UPT6 1336 aa20.2■□□□□ 0.82
SNAPC1-201ENST00000216294 NINLQ9Y2I6 1382 aa20.19■□□□□ 0.82
SNAPC1-201ENST00000216294 IQSEC2Q5JU85 1478 aa20.19■□□□□ 0.82
SNAPC1-201ENST00000216294 FTSJ3Q8IY81 847 aaKnown RBP20.19■□□□□ 0.82
SNAPC1-201ENST00000216294 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
SNAPC1-201ENST00000216294 TMEM2Q9UHN6 1383 aa20.19■□□□□ 0.82
SNAPC1-201ENST00000216294 CD163L1Q9NR16 1453 aa20.19■□□□□ 0.82
SNAPC1-201ENST00000216294 DLC1Q96QB1 1528 aa20.19■□□□□ 0.82
SNAPC1-201ENST00000216294 TBC1D2Q9BYX2 928 aa20.19■□□□□ 0.82
SNAPC1-201ENST00000216294 ABCC11Q96J66 1382 aa20.18■□□□□ 0.82
SNAPC1-201ENST00000216294 TXNDC2Q86VQ3 553 aa20.18■□□□□ 0.82
SNAPC1-201ENST00000216294 UBR1Q8IWV7 1749 aa20.18■□□□□ 0.82
SNAPC1-201ENST00000216294 PMFBP1Q8TBY8 1022 aa20.18■□□□□ 0.82
SNAPC1-201ENST00000216294 SMC4Q9NTJ3 1288 aa20.18■□□□□ 0.82
SNAPC1-201ENST00000216294 MFAP1P55081 439 aaKnown RBP20.17■□□□□ 0.82
SNAPC1-201ENST00000216294 CFAP53Q96M91 514 aa20.17■□□□□ 0.82
SNAPC1-201ENST00000216294 CABP1Q9NZU7 370 aa20.17■□□□□ 0.82
SNAPC1-201ENST00000216294 NSD2O96028 1365 aa20.16■□□□□ 0.82
SNAPC1-201ENST00000216294 ITPRIPQ8IWB1 547 aa20.16■□□□□ 0.82
SNAPC1-201ENST00000216294 WDR63Q8IWG1 891 aa20.16■□□□□ 0.82
SNAPC1-201ENST00000216294 MVPQ14764 893 aaKnown RBP20.16■□□□□ 0.82
SNAPC1-201ENST00000216294 SSH1Q8WYL5 1049 aa20.16■□□□□ 0.82
SNAPC1-201ENST00000216294 TERF2IPQ9NYB0 399 aa20.16■□□□□ 0.82
SNAPC1-201ENST00000216294 GZF1Q9H116 711 aaPredicted RBP20.15■□□□□ 0.82
SNAPC1-201ENST00000216294 HDGFP51858 240 aaKnown RBP20.15■□□□□ 0.82
SNAPC1-201ENST00000216294 TRIM27P14373 513 aa20.14■□□□□ 0.82
SNAPC1-201ENST00000216294 DZIP1LQ8IYY4 767 aaKnown RBP20.14■□□□□ 0.82
SNAPC1-201ENST00000216294 TBC1D32Q96NH3 1257 aa20.14■□□□□ 0.81
SNAPC1-201ENST00000216294 LTKP29376 864 aa20.13■□□□□ 0.81
SNAPC1-201ENST00000216294 RWDD1Q9H446 243 aaPredicted RBP20.13■□□□□ 0.81
SNAPC1-201ENST00000216294 BECN1Q14457 450 aa20.13■□□□□ 0.81
SNAPC1-201ENST00000216294 ZKSCAN2Q63HK3 967 aa20.13■□□□□ 0.81
SNAPC1-201ENST00000216294 ANTXR1Q9H6X2 564 aa20.13■□□□□ 0.81
SNAPC1-201ENST00000216294 HDGFL2Q7Z4V5 671 aaPredicted RBP20.12■□□□□ 0.81
SNAPC1-201ENST00000216294 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
SNAPC1-201ENST00000216294 NOB1Q9ULX3 412 aaKnown RBP20.12■□□□□ 0.81
SNAPC1-201ENST00000216294 TRIM35Q9UPQ4 493 aa20.12■□□□□ 0.81
SNAPC1-201ENST00000216294 FYB1O15117 783 aa20.12■□□□□ 0.81
SNAPC1-201ENST00000216294 NGEFQ8N5V2 710 aa20.11■□□□□ 0.81
SNAPC1-201ENST00000216294 TMPOP42166 694 aaKnown RBP20.1■□□□□ 0.81
SNAPC1-201ENST00000216294 UPF2Q9HAU5 1272 aaKnown RBP20.1■□□□□ 0.81
SNAPC1-201ENST00000216294 ADAMTS13Q76LX8 1427 aa20.1■□□□□ 0.81
SNAPC1-201ENST00000216294 C3P01024 1663 aa20.1■□□□□ 0.81
SNAPC1-201ENST00000216294 TMEM57Q8N5G2 664 aa20.1■□□□□ 0.81
SNAPC1-201ENST00000216294 WASLO00401 505 aaPredicted RBP20.09■□□□□ 0.81
SNAPC1-201ENST00000216294 THUMPD2Q9BTF0 503 aaKnown RBP20.09■□□□□ 0.81
SNAPC1-201ENST00000216294 RIPK4P57078 832 aa20.08■□□□□ 0.81
SNAPC1-201ENST00000216294 PLEKHF1Q96S99 279 aa20.08■□□□□ 0.81
SNAPC1-201ENST00000216294 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.08■□□□□ 0.8
SNAPC1-201ENST00000216294 NCKAP5LQ9HCH0 1330 aa20.08■□□□□ 0.8
SNAPC1-201ENST00000216294 C1orf115Q9H7X2 142 aa20.07■□□□□ 0.8
SNAPC1-201ENST00000216294 TECPR2O15040 1411 aa20.07■□□□□ 0.8
SNAPC1-201ENST00000216294 FER1L4A9Z1Z3 1794 aa20.07■□□□□ 0.8
SNAPC1-201ENST00000216294 ELL2O00472 640 aaPredicted RBP20.07■□□□□ 0.8
SNAPC1-201ENST00000216294 SLC26A8Q96RN1 970 aa20.07■□□□□ 0.8
SNAPC1-201ENST00000216294 ROBO2Q9HCK4 1378 aa20.07■□□□□ 0.8
SNAPC1-201ENST00000216294 EIF5BO60841 1220 aaKnown RBP20.06■□□□□ 0.8
SNAPC1-201ENST00000216294 CCDC27Q2M243 656 aa20.06■□□□□ 0.8
SNAPC1-201ENST00000216294 PLEKHG1Q9ULL1 1385 aa20.06■□□□□ 0.8
SNAPC1-201ENST00000216294 FAM135BQ49AJ0 1406 aa20.06■□□□□ 0.8
SNAPC1-201ENST00000216294 CPS1P31327 1500 aa20.05■□□□□ 0.8
SNAPC1-201ENST00000216294 C22orf23Q9BZE7 217 aa20.05■□□□□ 0.8
SNAPC1-201ENST00000216294 LNPKQ9C0E8 428 aa20.05■□□□□ 0.8
SNAPC1-201ENST00000216294 KNDC1Q76NI1 1749 aa20.05■□□□□ 0.8
SNAPC1-201ENST00000216294 PPIP5K1Q6PFW1 1433 aa20.04■□□□□ 0.8
SNAPC1-201ENST00000216294 ATP7BP35670 1465 aa20.04■□□□□ 0.8
SNAPC1-201ENST00000216294 ATF7IPQ6VMQ6 1270 aa20.03■□□□□ 0.8
SNAPC1-201ENST00000216294 HMOX1P09601 288 aa20.03■□□□□ 0.8
SNAPC1-201ENST00000216294 NUDT16Q96DE0 195 aaKnown RBP20.03■□□□□ 0.8
SNAPC1-201ENST00000216294 MED14O60244 1454 aa20.03■□□□□ 0.8
SNAPC1-201ENST00000216294 EID1Q9Y6B2 187 aa20.02■□□□□ 0.8
SNAPC1-201ENST00000216294 FOXD4L1Q9NU39 408 aa20.02■□□□□ 0.8
SNAPC1-201ENST00000216294 SIRT1Q96EB6 747 aa20.01■□□□□ 0.79
SNAPC1-201ENST00000216294 ANKRD26Q9UPS8 1709 aa20.01■□□□□ 0.79
SNAPC1-201ENST00000216294 PANK2Q9BZ23 570 aa20■□□□□ 0.79
SNAPC1-201ENST00000216294 PTPRUQ92729 1446 aa20■□□□□ 0.79
SNAPC1-201ENST00000216294 PRR36Q9H6K5 1346 aa19.99■□□□□ 0.79
SNAPC1-201ENST00000216294 COL3A1P02461 1466 aaPredicted RBP19.99■□□□□ 0.79
SNAPC1-201ENST00000216294 CPSF1Q10570 1443 aaKnown RBP19.99■□□□□ 0.79
SNAPC1-201ENST00000216294 KIF20BQ96Q89 1820 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms