RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 SSH2Q76I76 1423 aa24.54■■□□□ 1.52
MRPL28-201ENST00000199706 FNBP4Q8N3X1 1017 aaPredicted RBP24.54■■□□□ 1.52
MRPL28-201ENST00000199706 CABP1Q9NZU7 370 aa24.54■■□□□ 1.52
MRPL28-201ENST00000199706 CPSF1Q10570 1443 aaKnown RBP24.53■■□□□ 1.52
MRPL28-201ENST00000199706 MON2Q7Z3U7 1717 aa24.53■■□□□ 1.52
MRPL28-201ENST00000199706 NRKQ7Z2Y5 1582 aa24.53■■□□□ 1.52
MRPL28-201ENST00000199706 AFF2P51816 1311 aa24.53■■□□□ 1.52
MRPL28-201ENST00000199706 ADAMTS2O95450 1211 aa24.52■■□□□ 1.52
MRPL28-201ENST00000199706 C8orf37Q96NL8 207 aa24.52■■□□□ 1.52
MRPL28-201ENST00000199706 NWD2Q9ULI1 1742 aa24.52■■□□□ 1.52
MRPL28-201ENST00000199706 PHRF1Q9P1Y6 1649 aaKnown RBP24.51■■□□□ 1.51
MRPL28-201ENST00000199706 POTEAQ6S8J7 498 aa24.51■■□□□ 1.51
MRPL28-201ENST00000199706 ZNF692Q9BU19 519 aaPredicted RBP24.51■■□□□ 1.51
MRPL28-201ENST00000199706 SLIT2O94813 1529 aa24.5■■□□□ 1.51
MRPL28-201ENST00000199706 NGLY1Q96IV0 654 aa24.49■■□□□ 1.51
MRPL28-201ENST00000199706 CDK12Q9NYV4 1490 aaPredicted RBP24.49■■□□□ 1.51
MRPL28-201ENST00000199706 PAK3O75914 559 aaPredicted RBP24.48■■□□□ 1.51
MRPL28-201ENST00000199706 LMOD2Q6P5Q4 547 aa24.48■■□□□ 1.51
MRPL28-201ENST00000199706 CD163L1Q9NR16 1453 aa24.47■■□□□ 1.51
MRPL28-201ENST00000199706 PLCH1Q4KWH8 1693 aa24.46■■□□□ 1.51
MRPL28-201ENST00000199706 BCL9LQ86UU0 1499 aa24.46■■□□□ 1.51
MRPL28-201ENST00000199706 USP19O94966 1318 aa24.46■■□□□ 1.51
MRPL28-201ENST00000199706 COL14A1Q05707 1796 aaKnown RBP24.46■■□□□ 1.51
MRPL28-201ENST00000199706 PIK3C2AO00443 1686 aa24.46■■□□□ 1.51
MRPL28-201ENST00000199706 HAP1P54257 671 aaPredicted RBP24.45■■□□□ 1.5
MRPL28-201ENST00000199706 TMF1P82094 1093 aa24.45■■□□□ 1.5
MRPL28-201ENST00000199706 USP54Q70EL1 1684 aa24.45■■□□□ 1.5
MRPL28-201ENST00000199706 TTC21AQ8NDW8 1320 aa24.44■■□□□ 1.5
MRPL28-201ENST00000199706 CDCA8Q53HL2 280 aa24.44■■□□□ 1.5
MRPL28-201ENST00000199706 ATRNO75882 1429 aa24.44■■□□□ 1.5
MRPL28-201ENST00000199706 CABLES1Q8TDN4 633 aa24.43■■□□□ 1.5
MRPL28-201ENST00000199706 SLIT3O75094 1523 aa24.42■■□□□ 1.5
MRPL28-201ENST00000199706 ABTB2Q8N961 1025 aa24.42■■□□□ 1.5
MRPL28-201ENST00000199706 USP21Q9UK80 565 aa24.42■■□□□ 1.5
MRPL28-201ENST00000199706 KTN1Q86UP2 1357 aaKnown RBP24.42■■□□□ 1.5
MRPL28-201ENST00000199706 TRPC5Q9UL62 973 aaPredicted RBP24.41■■□□□ 1.5
MRPL28-201ENST00000199706 SOCS7O14512 581 aa24.4■■□□□ 1.5
MRPL28-201ENST00000199706 NLRP13Q86W25 1043 aa24.4■■□□□ 1.5
MRPL28-201ENST00000199706 TERF2IPQ9NYB0 399 aa24.4■■□□□ 1.5
MRPL28-201ENST00000199706 EDC4Q6P2E9 1401 aaKnown RBP24.4■■□□□ 1.5
MRPL28-201ENST00000199706 NRAPQ86VF7 1730 aa24.4■■□□□ 1.5
MRPL28-201ENST00000199706 CPDO75976 1380 aa24.4■■□□□ 1.5
MRPL28-201ENST00000199706 TTC21BQ7Z4L5 1316 aa24.39■■□□□ 1.5
MRPL28-201ENST00000199706 RXRBP28702 533 aa24.38■■□□□ 1.49
MRPL28-201ENST00000199706 RBM6P78332 1123 aaKnown RBP24.38■■□□□ 1.49
MRPL28-201ENST00000199706 EIF4G2P78344 907 aaKnown RBP eCLIP24.38■■□□□ 1.49
MRPL28-201ENST00000199706 HDGFL2Q7Z4V5 671 aaPredicted RBP24.38■■□□□ 1.49
MRPL28-201ENST00000199706 A0A1W2PP64 1363 aa24.38■■□□□ 1.49
MRPL28-201ENST00000199706 UNC5CLQ8IV45 518 aa24.37■■□□□ 1.49
MRPL28-201ENST00000199706 QTRT2Q9H974 415 aaKnown RBP24.37■■□□□ 1.49
MRPL28-201ENST00000199706 SLC12A5Q9H2X9 1139 aa24.36■■□□□ 1.49
MRPL28-201ENST00000199706 ANKRD36BQ8N2N9 1353 aa24.36■■□□□ 1.49
MRPL28-201ENST00000199706 MYOM1P52179 1685 aa24.35■■□□□ 1.49
MRPL28-201ENST00000199706 USP31Q70CQ4 1352 aa24.35■■□□□ 1.49
MRPL28-201ENST00000199706 TMC1Q8TDI8 760 aa24.35■■□□□ 1.49
MRPL28-201ENST00000199706 FAM83GA6ND36 823 aa24.34■■□□□ 1.49
MRPL28-201ENST00000199706 LMO7Q8WWI1 1683 aa24.34■■□□□ 1.49
MRPL28-201ENST00000199706 KIAA0232Q92628 1395 aa24.33■■□□□ 1.49
MRPL28-201ENST00000199706 PRDM11Q9NQV5 511 aa24.32■■□□□ 1.48
MRPL28-201ENST00000199706 ABCC6O95255 1503 aa24.31■■□□□ 1.48
MRPL28-201ENST00000199706 GCP02774 474 aa24.31■■□□□ 1.48
MRPL28-201ENST00000199706 NLRP6P59044 892 aa24.31■■□□□ 1.48
MRPL28-201ENST00000199706 GLI3P10071 1580 aa24.3■■□□□ 1.48
MRPL28-201ENST00000199706 VPS72Q15906 364 aa24.3■■□□□ 1.48
MRPL28-201ENST00000199706 NUTM2GQ5VZR2 741 aa24.3■■□□□ 1.48
MRPL28-201ENST00000199706 RGS12O14924 1447 aa24.29■■□□□ 1.48
MRPL28-201ENST00000199706 NFAT5O94916 1531 aa24.29■■□□□ 1.48
MRPL28-201ENST00000199706 HSPA5P11021 654 aaKnown RBP24.28■■□□□ 1.48
MRPL28-201ENST00000199706 KCNH5Q8NCM2 988 aa24.28■■□□□ 1.48
MRPL28-201ENST00000199706 GJD4Q96KN9 370 aaPredicted RBP24.28■■□□□ 1.48
MRPL28-201ENST00000199706 PLEKHG5O94827 1062 aa24.27■■□□□ 1.48
MRPL28-201ENST00000199706 OVOS2A0A0J9YW53 1432 aa24.27■■□□□ 1.48
MRPL28-201ENST00000199706 OVOS2Q6IE36 1432 aa24.27■■□□□ 1.48
MRPL28-201ENST00000199706 BTG4Q9NY30 223 aa24.26■■□□□ 1.47
MRPL28-201ENST00000199706 AATKQ6ZMQ8 1374 aa24.26■■□□□ 1.47
MRPL28-201ENST00000199706 COL18A1P39060 1754 aa24.24■■□□□ 1.47
MRPL28-201ENST00000199706 ZC3H6P61129 1189 aaKnown RBP24.23■■□□□ 1.47
MRPL28-201ENST00000199706 CAMTA1Q9Y6Y1 1673 aa24.23■■□□□ 1.47
MRPL28-201ENST00000199706 SUGP2Q8IX01 1082 aaKnown RBP eCLIP24.22■■□□□ 1.47
MRPL28-201ENST00000199706 COL5A2P05997 1499 aaPredicted RBP24.2■■□□□ 1.47
MRPL28-201ENST00000199706 KIF20BQ96Q89 1820 aa24.2■■□□□ 1.46
MRPL28-201ENST00000199706 ONECUT3O60422 494 aaPredicted RBP24.2■■□□□ 1.46
MRPL28-201ENST00000199706 ARHGEF25Q86VW2 580 aa24.2■■□□□ 1.46
MRPL28-201ENST00000199706 NME9Q86XW9 330 aa24.2■■□□□ 1.46
MRPL28-201ENST00000199706 SPATA31A5Q5VU36 1347 aa24.18■■□□□ 1.46
MRPL28-201ENST00000199706 SPATA31A7Q8IWB4 1347 aa24.18■■□□□ 1.46
MRPL28-201ENST00000199706 CHRNA2Q15822 529 aa24.18■■□□□ 1.46
MRPL28-201ENST00000199706 LTN1O94822 1766 aa24.17■■□□□ 1.46
MRPL28-201ENST00000199706 THSD7AQ9UPZ6 1657 aa24.16■■□□□ 1.46
MRPL28-201ENST00000199706 SPATA31A1Q5TZJ5 1347 aa24.13■■□□□ 1.45
MRPL28-201ENST00000199706 ZRANB1Q9UGI0 708 aa24.13■■□□□ 1.45
MRPL28-201ENST00000199706 EP400Q96L91 3159 aa24.13■■□□□ 1.45
MRPL28-201ENST00000199706 NSD3Q9BZ95 1437 aa24.12■■□□□ 1.45
MRPL28-201ENST00000199706 COG3Q96JB2 828 aa24.12■■□□□ 1.45
MRPL28-201ENST00000199706 BRWD3Q6RI45 1802 aa24.12■■□□□ 1.45
MRPL28-201ENST00000199706 CRB1P82279 1406 aa24.11■■□□□ 1.45
MRPL28-201ENST00000199706 FYB1O15117 783 aa24.11■■□□□ 1.45
MRPL28-201ENST00000199706 CCDC9Q9Y3X0 531 aaKnown RBP24.11■■□□□ 1.45
MRPL28-201ENST00000199706 CARD14Q9BXL6 1004 aa24.1■■□□□ 1.45
MRPL28-201ENST00000199706 RGPD5Q99666 1765 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms