RNA–Protein interactions for RNA: ENST00000023897.10

GABRA1-201, Transcript of gamma-aminobutyric acid type A receptor alpha1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GABRA1, Length 2,083 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA1-201ENST00000023897 PLEKHF1Q96S99 279 aa18.81■□□□□ 0.6
GABRA1-201ENST00000023897 GGNBP2Q9H3C7 697 aa18.81■□□□□ 0.6
GABRA1-201ENST00000023897 ATP7BP35670 1465 aa18.81■□□□□ 0.6
GABRA1-201ENST00000023897 HDGFL2Q7Z4V5 671 aaPredicted RBP18.8■□□□□ 0.6
GABRA1-201ENST00000023897 PPP6R1Q9UPN7 881 aa18.8■□□□□ 0.6
GABRA1-201ENST00000023897 IL16Q14005 1332 aa18.8■□□□□ 0.6
GABRA1-201ENST00000023897 FYB1O15117 783 aa18.8■□□□□ 0.6
GABRA1-201ENST00000023897 RLBP1P12271 317 aa18.8■□□□□ 0.6
GABRA1-201ENST00000023897 MAP2P11137 1827 aaKnown RBP18.79■□□□□ 0.6
GABRA1-201ENST00000023897 PNPLA6Q8IY17 1366 aa18.79■□□□□ 0.6
GABRA1-201ENST00000023897 TMPOP42166 694 aaKnown RBP18.78■□□□□ 0.6
GABRA1-201ENST00000023897 ZKSCAN2Q63HK3 967 aa18.78■□□□□ 0.6
GABRA1-201ENST00000023897 PNNQ9H307 717 aaKnown RBP18.78■□□□□ 0.6
GABRA1-201ENST00000023897 U2SURPO15042 1029 aaKnown RBP18.78■□□□□ 0.6
GABRA1-201ENST00000023897 A2ML1A8K2U0 1454 aa18.78■□□□□ 0.6
GABRA1-201ENST00000023897 KNDC1Q76NI1 1749 aa18.78■□□□□ 0.6
GABRA1-201ENST00000023897 MVPQ14764 893 aaKnown RBP18.77■□□□□ 0.6
GABRA1-201ENST00000023897 BCL2L13Q9BXK5 485 aa18.77■□□□□ 0.6
GABRA1-201ENST00000023897 LRRC7Q96NW7 1537 aa18.77■□□□□ 0.59
GABRA1-201ENST00000023897 FBXO31Q5XUX0 539 aaPredicted RBP18.77■□□□□ 0.59
GABRA1-201ENST00000023897 RWDD1Q9H446 243 aaPredicted RBP18.77■□□□□ 0.59
GABRA1-201ENST00000023897 PCDHB15Q9Y5E8 787 aa18.77■□□□□ 0.59
GABRA1-201ENST00000023897 CDK19Q9BWU1 502 aa18.76■□□□□ 0.59
GABRA1-201ENST00000023897 TNNQ9UQP3 1299 aa18.76■□□□□ 0.59
GABRA1-201ENST00000023897 TRIM35Q9UPQ4 493 aa18.75■□□□□ 0.59
GABRA1-201ENST00000023897 NRXN3Q9Y4C0 1643 aa18.75■□□□□ 0.59
GABRA1-201ENST00000023897 STAG3Q9UJ98 1225 aa18.75■□□□□ 0.59
GABRA1-201ENST00000023897 DIAPH1O60610 1272 aaKnown RBP18.74■□□□□ 0.59
GABRA1-201ENST00000023897 DZIP1LQ8IYY4 767 aaKnown RBP18.74■□□□□ 0.59
GABRA1-201ENST00000023897 RIMS2Q9UQ26 1411 aa18.74■□□□□ 0.59
GABRA1-201ENST00000023897 FTSJ3Q8IY81 847 aaKnown RBP18.73■□□□□ 0.59
GABRA1-201ENST00000023897 MON2Q7Z3U7 1717 aa18.73■□□□□ 0.59
GABRA1-201ENST00000023897 USP19O94966 1318 aa18.73■□□□□ 0.59
GABRA1-201ENST00000023897 TSR2Q969E8 191 aaKnown RBP18.73■□□□□ 0.59
GABRA1-201ENST00000023897 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
GABRA1-201ENST00000023897 EXOSC9Q06265 439 aaKnown RBP18.72■□□□□ 0.59
GABRA1-201ENST00000023897 SMC4Q9NTJ3 1288 aa18.72■□□□□ 0.59
GABRA1-201ENST00000023897 ITSN1Q15811 1721 aa18.72■□□□□ 0.59
GABRA1-201ENST00000023897 FAM135BQ49AJ0 1406 aa18.71■□□□□ 0.59
GABRA1-201ENST00000023897 AKAP12Q02952 1782 aa18.71■□□□□ 0.59
GABRA1-201ENST00000023897 SENP3Q9H4L4 574 aaPredicted RBP18.71■□□□□ 0.59
GABRA1-201ENST00000023897 PDZRN3Q9UPQ7 1066 aa18.71■□□□□ 0.59
GABRA1-201ENST00000023897 NFKBIBQ15653 356 aa18.7■□□□□ 0.58
GABRA1-201ENST00000023897 CABP1Q9NZU7 370 aa18.7■□□□□ 0.58
GABRA1-201ENST00000023897 RIPK4P57078 832 aa18.69■□□□□ 0.58
GABRA1-201ENST00000023897 FAM69CQ0P6D2 419 aa18.69■□□□□ 0.58
GABRA1-201ENST00000023897 FCHSD2O94868 740 aa18.69■□□□□ 0.58
GABRA1-201ENST00000023897 DDX19BQ9UMR2 479 aa18.69■□□□□ 0.58
GABRA1-201ENST00000023897 DLG5Q8TDM6 1919 aa18.68■□□□□ 0.58
GABRA1-201ENST00000023897 EDC4Q6P2E9 1401 aaKnown RBP18.68■□□□□ 0.58
GABRA1-201ENST00000023897 CYB5RLQ6IPT4 315 aa18.67■□□□□ 0.58
GABRA1-201ENST00000023897 ATF7IPQ6VMQ6 1270 aa18.67■□□□□ 0.58
GABRA1-201ENST00000023897 SSH1Q8WYL5 1049 aa18.67■□□□□ 0.58
GABRA1-201ENST00000023897 KIF16BQ96L93 1317 aa18.67■□□□□ 0.58
GABRA1-201ENST00000023897 PPIP5K1Q6PFW1 1433 aa18.67■□□□□ 0.58
GABRA1-201ENST00000023897 CDK12Q9NYV4 1490 aaPredicted RBP18.67■□□□□ 0.58
GABRA1-201ENST00000023897 TRIM27P14373 513 aa18.67■□□□□ 0.58
GABRA1-201ENST00000023897 HDAC1Q13547 482 aaPredicted RBP18.66■□□□□ 0.58
GABRA1-201ENST00000023897 BECN1Q14457 450 aa18.66■□□□□ 0.58
GABRA1-201ENST00000023897 UPF2Q9HAU5 1272 aaKnown RBP18.66■□□□□ 0.58
GABRA1-201ENST00000023897 CPSF1Q10570 1443 aaKnown RBP18.66■□□□□ 0.58
GABRA1-201ENST00000023897 SEC24BO95487 1268 aa18.65■□□□□ 0.58
GABRA1-201ENST00000023897 CPS1P31327 1500 aa18.65■□□□□ 0.58
GABRA1-201ENST00000023897 C3P01024 1663 aa18.65■□□□□ 0.58
GABRA1-201ENST00000023897 ALDH1L2Q3SY69 923 aa18.65■□□□□ 0.58
GABRA1-201ENST00000023897 IPO8O15397 1037 aaKnown RBP18.64■□□□□ 0.57
GABRA1-201ENST00000023897 RSPH6AQ9H0K4 717 aa18.64■□□□□ 0.57
GABRA1-201ENST00000023897 ZNF428Q96B54 188 aa18.64■□□□□ 0.57
GABRA1-201ENST00000023897 POLKQ9UBT6 870 aa18.64■□□□□ 0.57
GABRA1-201ENST00000023897 WAPLQ7Z5K2 1190 aa18.62■□□□□ 0.57
GABRA1-201ENST00000023897 ITPRIPQ8IWB1 547 aa18.62■□□□□ 0.57
GABRA1-201ENST00000023897 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.62■□□□□ 0.57
GABRA1-201ENST00000023897 NOB1Q9ULX3 412 aaKnown RBP18.62■□□□□ 0.57
GABRA1-201ENST00000023897 TECPR2O15040 1411 aa18.62■□□□□ 0.57
GABRA1-201ENST00000023897 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.62■□□□□ 0.57
GABRA1-201ENST00000023897 AATKQ6ZMQ8 1374 aa18.61■□□□□ 0.57
GABRA1-201ENST00000023897 KIF13AQ9H1H9 1805 aa18.61■□□□□ 0.57
GABRA1-201ENST00000023897 PRKAR2BP31323 418 aa18.61■□□□□ 0.57
GABRA1-201ENST00000023897 TBC1D32Q96NH3 1257 aa18.61■□□□□ 0.57
GABRA1-201ENST00000023897 BRPF1P55201 1214 aaPredicted RBP18.61■□□□□ 0.57
GABRA1-201ENST00000023897 CALD1Q05682 793 aaKnown RBP18.61■□□□□ 0.57
GABRA1-201ENST00000023897 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
GABRA1-201ENST00000023897 WASLO00401 505 aaPredicted RBP18.6■□□□□ 0.57
GABRA1-201ENST00000023897 GSE1Q14687 1217 aa18.59■□□□□ 0.57
GABRA1-201ENST00000023897 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
GABRA1-201ENST00000023897 UBR1Q8IWV7 1749 aa18.59■□□□□ 0.57
GABRA1-201ENST00000023897 TMEM57Q8N5G2 664 aa18.59■□□□□ 0.57
GABRA1-201ENST00000023897 SIRT1Q96EB6 747 aa18.59■□□□□ 0.57
GABRA1-201ENST00000023897 SMC5Q8IY18 1101 aa18.58■□□□□ 0.57
GABRA1-201ENST00000023897 TOPAZ1Q8N9V7 1692 aa18.58■□□□□ 0.56
GABRA1-201ENST00000023897 ZBTB40Q9NUA8 1239 aa18.58■□□□□ 0.56
GABRA1-201ENST00000023897 METP08581 1390 aa18.57■□□□□ 0.56
GABRA1-201ENST00000023897 PTCH1Q13635 1447 aa18.57■□□□□ 0.56
GABRA1-201ENST00000023897 IL13P35225 146 aa18.55■□□□□ 0.56
GABRA1-201ENST00000023897 CHMP4BQ9H444 224 aaKnown RBP18.55■□□□□ 0.56
GABRA1-201ENST00000023897 PIK3R4Q99570 1358 aa18.55■□□□□ 0.56
GABRA1-201ENST00000023897 IFT57Q9NWB7 429 aa18.54■□□□□ 0.56
GABRA1-201ENST00000023897 FRAT2O75474 233 aaPredicted RBP18.54■□□□□ 0.56
GABRA1-201ENST00000023897 HDGFP51858 240 aaKnown RBP18.54■□□□□ 0.56
GABRA1-201ENST00000023897 GNAI1P63096 354 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms