RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 NRXN1Q9ULB1 1477 aa13.22□□□□□ -0.29
CX3CL1-201ENST00000006053 EFCAB6Q5THR3 1501 aa13.22□□□□□ -0.29
CX3CL1-201ENST00000006053 CT47B1P0C2W7 299 aaPredicted RBP13.21□□□□□ -0.29
CX3CL1-201ENST00000006053 RIPK4P57078 832 aa13.21□□□□□ -0.29
CX3CL1-201ENST00000006053 TRIM35Q9UPQ4 493 aa13.21□□□□□ -0.29
CX3CL1-201ENST00000006053 FGD1P98174 961 aa13.21□□□□□ -0.29
CX3CL1-201ENST00000006053 INO80Q9ULG1 1556 aaPredicted RBP13.21□□□□□ -0.3
CX3CL1-201ENST00000006053 MYO3AQ8NEV4 1616 aa13.21□□□□□ -0.3
CX3CL1-201ENST00000006053 FSD2A1L4K1 749 aa13.21□□□□□ -0.3
CX3CL1-201ENST00000006053 HSP90AA1P07900 732 aaKnown RBP13.21□□□□□ -0.3
CX3CL1-201ENST00000006053 NEURL4Q96JN8 1562 aa13.21□□□□□ -0.3
CX3CL1-201ENST00000006053 MROH1Q8NDA8 1641 aa13.21□□□□□ -0.3
CX3CL1-201ENST00000006053 ANKRD36BQ8N2N9 1353 aa13.2□□□□□ -0.3
CX3CL1-201ENST00000006053 QRICH2Q9H0J4 1663 aa13.2□□□□□ -0.3
CX3CL1-201ENST00000006053 SMC5Q8IY18 1101 aa13.2□□□□□ -0.3
CX3CL1-201ENST00000006053 FOXD4L1Q9NU39 408 aa13.2□□□□□ -0.3
CX3CL1-201ENST00000006053 TRHP20396 242 aaPredicted RBP13.19□□□□□ -0.3
CX3CL1-201ENST00000006053 HSP90AB1P08238 724 aaKnown RBP13.19□□□□□ -0.3
CX3CL1-201ENST00000006053 PLEKHF1Q96S99 279 aa13.19□□□□□ -0.3
CX3CL1-201ENST00000006053 PPRC1Q5VV67 1664 aaKnown RBP13.19□□□□□ -0.3
CX3CL1-201ENST00000006053 ARAP3Q8WWN8 1544 aa13.19□□□□□ -0.3
CX3CL1-201ENST00000006053 CD109Q6YHK3 1445 aa13.19□□□□□ -0.3
CX3CL1-201ENST00000006053 ZBTB40Q9NUA8 1239 aa13.18□□□□□ -0.3
CX3CL1-201ENST00000006053 DDX11L8A8MPP1 907 aa13.18□□□□□ -0.3
CX3CL1-201ENST00000006053 IPO8O15397 1037 aaKnown RBP13.18□□□□□ -0.3
CX3CL1-201ENST00000006053 IFT172Q9UG01 1749 aa13.18□□□□□ -0.3
CX3CL1-201ENST00000006053 SETBP1Q9Y6X0 1596 aa13.18□□□□□ -0.3
CX3CL1-201ENST00000006053 PNNQ9H307 717 aaKnown RBP13.18□□□□□ -0.3
CX3CL1-201ENST00000006053 ADGRB3O60242 1522 aa13.17□□□□□ -0.3
CX3CL1-201ENST00000006053 MRE11P49959 708 aa13.17□□□□□ -0.3
CX3CL1-201ENST00000006053 NPATQ14207 1427 aa13.17□□□□□ -0.3
CX3CL1-201ENST00000006053 NSD2O96028 1365 aa13.17□□□□□ -0.3
CX3CL1-201ENST00000006053 NCBP3Q53F19 620 aaKnown RBP13.17□□□□□ -0.3
CX3CL1-201ENST00000006053 ANKRD45Q5TZF3 282 aa13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 C1orf115Q9H7X2 142 aa13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 KIF16BQ96L93 1317 aa13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 ADGRB1O14514 1584 aa13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 CHD1LQ86WJ1 897 aa13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 ZNF692Q9BU19 519 aaPredicted RBP13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 GRPEL1Q9HAV7 217 aa13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 A0A1W2PP64 1363 aa13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 MINK1Q8N4C8 1332 aaPredicted RBP13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 VGFO15240 615 aaPredicted RBP13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 RRP9O43818 475 aaKnown RBP13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 NUCB1Q02818 461 aa13.16□□□□□ -0.3
CX3CL1-201ENST00000006053 DIAPH1O60610 1272 aaKnown RBP13.15□□□□□ -0.3
CX3CL1-201ENST00000006053 TNPO1Q92973 898 aaKnown RBP13.15□□□□□ -0.3
CX3CL1-201ENST00000006053 RPGRIP1LQ68CZ1 1315 aa13.15□□□□□ -0.3
CX3CL1-201ENST00000006053 ASXL2Q76L83 1435 aa13.15□□□□□ -0.3
CX3CL1-201ENST00000006053 ABCA9Q8IUA7 1624 aa13.14□□□□□ -0.31
CX3CL1-201ENST00000006053 FYB1O15117 783 aa13.14□□□□□ -0.31
CX3CL1-201ENST00000006053 TULP4Q9NRJ4 1543 aa13.14□□□□□ -0.31
CX3CL1-201ENST00000006053 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
CX3CL1-201ENST00000006053 RBM25P49756 843 aaKnown RBP13.14□□□□□ -0.31
CX3CL1-201ENST00000006053 FBLN1P23142 703 aa13.13□□□□□ -0.31
CX3CL1-201ENST00000006053 ABCC11Q96J66 1382 aa13.13□□□□□ -0.31
CX3CL1-201ENST00000006053 ADGRB2O60241 1585 aa13.13□□□□□ -0.31
CX3CL1-201ENST00000006053 ZC3H13Q5T200 1668 aaKnown RBP13.13□□□□□ -0.31
CX3CL1-201ENST00000006053 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
CX3CL1-201ENST00000006053 PUS7Q96PZ0 661 aaKnown RBP13.13□□□□□ -0.31
CX3CL1-201ENST00000006053 TERF2IPQ9NYB0 399 aa13.13□□□□□ -0.31
CX3CL1-201ENST00000006053 IL16Q14005 1332 aa13.12□□□□□ -0.31
CX3CL1-201ENST00000006053 CLCN1P35523 988 aa13.12□□□□□ -0.31
CX3CL1-201ENST00000006053 THUMPD2Q9BTF0 503 aaKnown RBP13.12□□□□□ -0.31
CX3CL1-201ENST00000006053 SNX21Q969T3 373 aa13.12□□□□□ -0.31
CX3CL1-201ENST00000006053 RBM42Q9BTD8 480 aaKnown RBP13.12□□□□□ -0.31
CX3CL1-201ENST00000006053 USP32Q8NFA0 1604 aa13.12□□□□□ -0.31
CX3CL1-201ENST00000006053 KIDINS220Q9ULH0 1771 aa13.11□□□□□ -0.31
CX3CL1-201ENST00000006053 CD2BP2O95400 341 aaKnown RBP13.11□□□□□ -0.31
CX3CL1-201ENST00000006053 PRKAR2BP31323 418 aa13.11□□□□□ -0.31
CX3CL1-201ENST00000006053 TRIM44Q96DX7 344 aaPredicted RBP13.11□□□□□ -0.31
CX3CL1-201ENST00000006053 GLI2P10070 1586 aa13.11□□□□□ -0.31
CX3CL1-201ENST00000006053 PPLO60437 1756 aa13.11□□□□□ -0.31
CX3CL1-201ENST00000006053 HMOX1P09601 288 aa13.1□□□□□ -0.31
CX3CL1-201ENST00000006053 ALDH1L2Q3SY69 923 aa13.1□□□□□ -0.31
CX3CL1-201ENST00000006053 BMP2KLQ5H9B9 411 aa13.1□□□□□ -0.31
CX3CL1-201ENST00000006053 LMTK2Q8IWU2 1503 aa13.1□□□□□ -0.31
CX3CL1-201ENST00000006053 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.1□□□□□ -0.31
CX3CL1-201ENST00000006053 DDIT3P35638 169 aa13.1□□□□□ -0.31
CX3CL1-201ENST00000006053 GAS2L3Q86XJ1 694 aa13.1□□□□□ -0.31
CX3CL1-201ENST00000006053 PRAM1Q96QH2 718 aa13.1□□□□□ -0.31
CX3CL1-201ENST00000006053 TBC1D9Q6ZT07 1266 aa13.09□□□□□ -0.31
CX3CL1-201ENST00000006053 IDI1Q13907 227 aa13.09□□□□□ -0.31
CX3CL1-201ENST00000006053 RAB3GAP1Q15042 981 aa13.09□□□□□ -0.31
CX3CL1-201ENST00000006053 HDGFL2Q7Z4V5 671 aaPredicted RBP13.09□□□□□ -0.31
CX3CL1-201ENST00000006053 CIZ1Q9ULV3 898 aaPredicted RBP13.09□□□□□ -0.31
CX3CL1-201ENST00000006053 ESPNB1AK53 854 aa13.08□□□□□ -0.31
CX3CL1-201ENST00000006053 ZBTB7BO15156 539 aaPredicted RBP13.08□□□□□ -0.31
CX3CL1-201ENST00000006053 TSPYL6Q8N831 410 aa13.08□□□□□ -0.31
CX3CL1-201ENST00000006053 KIF2CQ99661 725 aa13.08□□□□□ -0.31
CX3CL1-201ENST00000006053 NCOA3Q9Y6Q9 1424 aa13.08□□□□□ -0.32
CX3CL1-201ENST00000006053 K7ELQ4 463 aaPredicted RBP13.08□□□□□ -0.32
CX3CL1-201ENST00000006053 GCC1Q96CN9 775 aa13.08□□□□□ -0.32
CX3CL1-201ENST00000006053 CABP1Q9NZU7 370 aa13.08□□□□□ -0.32
CX3CL1-201ENST00000006053 STAG3Q9UJ98 1225 aa13.08□□□□□ -0.32
CX3CL1-201ENST00000006053 SSFA2P28290 1259 aa13.07□□□□□ -0.32
CX3CL1-201ENST00000006053 COL3A1P02461 1466 aaPredicted RBP13.07□□□□□ -0.32
CX3CL1-201ENST00000006053 PPIP5K1Q6PFW1 1433 aa13.07□□□□□ -0.32
CX3CL1-201ENST00000006053 FCHSD2O94868 740 aa13.07□□□□□ -0.32
CX3CL1-201ENST00000006053 ERBB4Q15303 1308 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms