RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 AK5Q9Y6K8 562 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 DOCK1Q14185 1865 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 RNASEH1O60930 286 aaKnown RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 KLHL2O95198 593 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 LTFP02788 710 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 CPOXP36551 454 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 MAP3K7CLP57077 242 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 DEUP1Q05D60 604 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 PKDCCQ504Y2 493 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 SIX6OS1Q8N1H7 587 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 ANKRD52Q8NB46 1076 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 GDPD5Q8WTR4 605 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 SORT1Q99523 831 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 CHRAC1Q9NRG0 131 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 IARS2Q9NSE4 1012 aaKnown RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 CDH22Q9UJ99 828 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 ADAMTS6Q9UKP5 1117 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 KPNA7A9QM74 516 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 F8W8V4 182 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 GARSP41250 739 aaKnown RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 SFT2D3Q587I9 215 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 NOL9Q5SY16 702 aaKnown RBP14.95□□□□□ -0.02
SCARB2-221ENST00000640341 IL31Q6EBC2 164 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 FSTL4Q6MZW2 842 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 NAPRTQ6XQN6 538 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 SLC26A9Q7LBE3 791 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 APPL2Q8NEU8 664 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 EDEM1Q92611 657 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 GCNAQ96QF7 691 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 OR52B2Q96RD2 323 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 S100A14Q9HCY8 104 aa14.95□□□□□ -0.02
SCARB2-221ENST00000640341 TK2O00142 265 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 FDFT1P37268 417 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 GP5P40197 560 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 IREB2P48200 963 aaKnown RBP14.94□□□□□ -0.02
SCARB2-221ENST00000640341 PKNOX1P55347 436 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 C9orf57Q5W0N0 161 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 LRRC8BQ6P9F7 803 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 DHDDSQ86SQ9 333 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 OR6Y1Q8NGX8 325 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 MAPK15Q8TD08 544 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 NUF2Q9BZD4 464 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 TASP1Q9H6P5 420 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 VANGL2Q9ULK5 521 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 CCDC160A6NGH7 325 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 ZBTB14O43829 449 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 AOC1P19801 751 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 LAMC2Q13753 1193 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 MMEL1Q495T6 779 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 NLGN2Q8NFZ4 835 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 OPTNQ96CV9 577 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 BFARQ9NZS9 450 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 MORF4L1Q9UBU8 362 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 LCTP09848 1927 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 HUS1O60921 280 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 ENO3P13929 434 aaPredicted RBP14.94□□□□□ -0.02
SCARB2-221ENST00000640341 TUBB3Q13509 450 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 ZNF460Q14592 562 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 TMEM198Q66K66 360 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 MARK2Q7KZI7 788 aaKnown RBP14.94□□□□□ -0.02
SCARB2-221ENST00000640341 CCNYL1Q8N7R7 359 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 GATA6Q92908 595 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 RNF34Q969K3 372 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 CMTM5Q96DZ9 223 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 LENG8Q96PV6 779 aaPredicted RBP14.94□□□□□ -0.02
SCARB2-221ENST00000640341 POMPQ9Y244 141 aa14.94□□□□□ -0.02
SCARB2-221ENST00000640341 MPSTP25325 297 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 MATKP42679 507 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 PTPN9P43378 593 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 NIPAL4Q0D2K0 466 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 DLG1Q12959 904 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 MED21Q13503 144 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 PDCD2Q16342 344 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-221ENST00000640341 RNF111Q6ZNA4 994 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 TDRD5Q8NAT2 981 aaKnown RBP14.93□□□□□ -0.02
SCARB2-221ENST00000640341 PIGVQ9NUD9 493 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 INPP5FQ9Y2H2 1132 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 POLR2AP24928 1970 aaKnown RBP14.93□□□□□ -0.02
SCARB2-221ENST00000640341 RGPD3A6NKT7 1758 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-221ENST00000640341 RGPD4Q7Z3J3 1758 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 ZBTB24O43167 697 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-221ENST00000640341 PGM3O95394 542 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 IL1BP01584 269 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 GSTA2P09210 222 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 SRGAP2BP0DMP2 458 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 ERCC2P18074 760 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 HOXA11P31270 313 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-221ENST00000640341 GRM5P41594 1212 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 MAGEA6P43360 314 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 PDK1Q15118 436 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 AP1ARQ63HQ0 302 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 LENG1Q96BZ8 264 aaPredicted RBP14.93□□□□□ -0.02
SCARB2-221ENST00000640341 APBA2Q99767 749 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 OMDQ99983 421 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 SSX2IPQ9Y2D8 614 aa14.93□□□□□ -0.02
SCARB2-221ENST00000640341 CAPN8A6NHC0 703 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 NCAM1P13591 858 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 ITGAXP20702 1163 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 CNTFP26441 200 aa14.92□□□□□ -0.02
SCARB2-221ENST00000640341 CCNIQ14094 377 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms