RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 TPI1P60174 286 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 ZNF177Q13360 481 aaPredicted RBP13.59□□□□□ -0.23
GTF3A-209ENST00000640289 FUT11Q495W5 492 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 EMC10Q5UCC4 262 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 TMEM215Q68D42 235 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 CXorf57Q6NSI4 855 aaKnown RBP13.59□□□□□ -0.23
GTF3A-209ENST00000640289 Q6ZS52 159 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 CHST9Q7L1S5 443 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 BMP8AQ7Z5Y6 402 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 ANKS1BQ7Z6G8 1248 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 NLRP14Q86W24 1093 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 CCDC117Q8IWD4 279 aaPredicted RBP13.59□□□□□ -0.23
GTF3A-209ENST00000640289 SUGP1Q8IWZ8 645 aaKnown RBP13.59□□□□□ -0.23
GTF3A-209ENST00000640289 TXLNBQ8N3L3 684 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 TEKT4Q8WW24 435 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 EPAS1Q99814 870 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 OSBPL6Q9BZF3 934 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 ZDHHC4Q9NPG8 344 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.59□□□□□ -0.23
GTF3A-209ENST00000640289 NDFIP2Q9NV92 336 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 INTS6Q9UL03 887 aaKnown RBP13.59□□□□□ -0.23
GTF3A-209ENST00000640289 HCN2Q9UL51 889 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 GUCA1BQ9UMX6 200 aa13.59□□□□□ -0.23
GTF3A-209ENST00000640289 GRID2IPA4D2P6 1211 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 EEF2KO00418 725 aaKnown RBP13.58□□□□□ -0.24
GTF3A-209ENST00000640289 SPOPO43791 374 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 GPR37L1O60883 481 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 RNF40O75150 1001 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 CD48P09326 243 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 RHOQP17081 205 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 MZF1P28698 734 aaPredicted RBP13.58□□□□□ -0.24
GTF3A-209ENST00000640289 HOXC13P31276 330 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 CSKP41240 450 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 SLC1A1P43005 524 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 CDH6P55285 790 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 LRRC32Q14392 662 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 GAS6Q14393 721 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 DPYSL2Q16555 572 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 DGKKQ5KSL6 1271 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 C11orf63Q6NUN7 778 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 PKN3Q6P5Z2 889 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 KIAA0907Q7Z7F0 614 aaPredicted RBP13.58□□□□□ -0.24
GTF3A-209ENST00000640289 DAAM2Q86T65 1068 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 PSTKQ8IV42 348 aaKnown RBP13.58□□□□□ -0.24
GTF3A-209ENST00000640289 APCDD1Q8J025 514 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 FBXL6Q8N531 539 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.58□□□□□ -0.24
GTF3A-209ENST00000640289 TMEM105Q8N8V8 129 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 CLDN23Q96B33 292 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 PCDH18Q9HCL0 1135 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 LZTFL1Q9NQ48 299 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 CWC15Q9P013 229 aaKnown RBP13.58□□□□□ -0.24
GTF3A-209ENST00000640289 DLGAP2Q9P1A6 1054 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 TBC1D30Q9Y2I9 924 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 PPP2R2CQ9Y2T4 447 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 MYOFQ9NZM1 2061 aa13.58□□□□□ -0.24
GTF3A-209ENST00000640289 TTC28Q96AY4 2481 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 PRR33A8MZF0 331 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 NCAM2O15394 837 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 KRT86O43790 486 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 PALMO75781 387 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 RHOCP08134 193 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 KRT7P08729 469 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 CHRM1P11229 460 aaPredicted RBP13.57□□□□□ -0.24
GTF3A-209ENST00000640289 OR1E1P30953 314 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 TIE1P35590 1138 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 TNFRSF4P43489 277 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 KIR2DL1P43626 348 aaPredicted RBP13.57□□□□□ -0.24
GTF3A-209ENST00000640289 ARSEP51690 589 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 CLCN5P51795 746 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 MMRN1Q13201 1228 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 KRT81Q14533 505 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 PLEKHG6Q3KR16 790 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 PREPLQ4J6C6 727 aaPredicted RBP13.57□□□□□ -0.24
GTF3A-209ENST00000640289 C2orf27AQ580R0 203 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 PITRM1Q5JRX3 1037 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 TMEM31Q5JXX7 168 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 ZFYVE27Q5T4F4 411 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 RNF219Q5W0B1 726 aaPredicted RBP13.57□□□□□ -0.24
GTF3A-209ENST00000640289 MBLAC2Q68D91 279 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 RFX8Q6ZV50 586 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 POLNQ7Z5Q5 900 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 ADIPOR2Q86V24 386 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 AHI1Q8N157 1196 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 LRRC57Q8N9N7 239 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 RPLP0P6Q8NHW5 317 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 SORCS1Q8WY21 1168 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 C1QTNF1Q9BXJ1 281 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 TSGA10Q9BZW7 698 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 CIPCQ9C0C6 399 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 POLR3BQ9NW08 1133 aaPredicted RBP13.57□□□□□ -0.24
GTF3A-209ENST00000640289 TMEM248Q9NWD8 314 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 KIAA1522Q9P206 1035 aaPredicted RBP13.57□□□□□ -0.24
GTF3A-209ENST00000640289 DNAI1Q9UI46 699 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 CAPN6Q9Y6Q1 641 aa13.57□□□□□ -0.24
GTF3A-209ENST00000640289 KIAA1549LQ6ZVL6 1849 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 A0A0D9SEW6 157 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 DAPK3O43293 454 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 ERCC2P18074 760 aa13.56□□□□□ -0.24
GTF3A-209ENST00000640289 ARL4AP40617 200 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms