RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 TTC39CQ8N584 583 aa6.93□□□□□ -1.3
RFC1-217ENST00000639695 RUFY2Q8WXA3 655 aa6.93□□□□□ -1.3
RFC1-217ENST00000639695 FKBP10Q96AY3 582 aa6.93□□□□□ -1.3
RFC1-217ENST00000639695 WDYHV1Q96HA8 205 aa6.93□□□□□ -1.3
RFC1-217ENST00000639695 AKIP1Q9NQ31 210 aa6.93□□□□□ -1.3
RFC1-217ENST00000639695 THAP1Q9NVV9 213 aa6.93□□□□□ -1.3
RFC1-217ENST00000639695 HCFC1R1Q9NWW0 138 aa6.93□□□□□ -1.3
RFC1-217ENST00000639695 SARDHQ9UL12 918 aa6.93□□□□□ -1.3
RFC1-217ENST00000639695 ZNF215Q9UL58 517 aaPredicted RBP6.93□□□□□ -1.3
RFC1-217ENST00000639695 MAP3K2Q9Y2U5 619 aa6.93□□□□□ -1.3
RFC1-217ENST00000639695 PCDHB2Q9Y5E7 798 aa6.93□□□□□ -1.3
RFC1-217ENST00000639695 COPG1Q9Y678 874 aaKnown RBP6.93□□□□□ -1.3
RFC1-217ENST00000639695 CYP3A7-CYP3A51PA0A087WV96 503 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 AHRRA9YTQ3 701 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 CA12O43570 354 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 SPRY2O43597 315 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 ERBB2P04626 1255 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 TMIGD3P0DMS9 266 aaPredicted RBP6.92□□□□□ -1.3
RFC1-217ENST00000639695 CYP3A7P24462 503 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 MC1RQ01726 317 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 CDK18Q07002 472 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 ALKBH1Q13686 389 aaKnown RBP6.92□□□□□ -1.3
RFC1-217ENST00000639695 ARMC3Q5W041 872 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 DPY19L2P1Q6NXN4 242 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 IKBIPQ70UQ0 350 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 KRT74Q7RTS7 529 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 MAVSQ7Z434 540 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 TAGAPQ8N103 731 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 PNPLA1Q8N8W4 532 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 SRFBP1Q8NEF9 429 aaKnown RBP6.92□□□□□ -1.3
RFC1-217ENST00000639695 RNFT2Q96EX2 444 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 PTCD3Q96EY7 689 aaKnown RBP6.92□□□□□ -1.3
RFC1-217ENST00000639695 TRMT61AQ96FX7 289 aaKnown RBP6.92□□□□□ -1.3
RFC1-217ENST00000639695 CALML4Q96GE6 196 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 FEM1CQ96JP0 617 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 MPHOSPH8Q99549 860 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 PRRX2Q99811 253 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 SLF1Q9BQI6 1058 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 ARHGAP39Q9C0H5 1083 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 MUC13Q9H3R2 512 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 BRF2Q9HAW0 419 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 SEMA4BQ9NPR2 832 aaPredicted RBP6.92□□□□□ -1.3
RFC1-217ENST00000639695 SNX15Q9NRS6 342 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 CFDP1Q9UEE9 299 aaPredicted RBP6.92□□□□□ -1.3
RFC1-217ENST00000639695 SNX8Q9Y5X2 465 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 KDM3AQ9Y4C1 1321 aa6.92□□□□□ -1.3
RFC1-217ENST00000639695 FAM90A7PA6NKC0 464 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 FAM90A22PA8MWA6 464 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 FAM90A12PA8MX19 464 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 FAM90A23PA8MXZ1 464 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 TEX22C9J3V5 150 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 CES2O00748 559 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 VILLO15195 856 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 PPFIA2O75334 1257 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 NCR1O76036 304 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 NXPH3O95157 252 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 MLYCDO95822 493 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 DNTTP04053 509 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 CSH1P0DML2 217 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 CSH2P0DML3 217 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 PEPDP12955 493 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 DDX6P26196 483 aaKnown RBP eCLIP6.91□□□□□ -1.3
RFC1-217ENST00000639695 BSGP35613 385 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 RPS6KA3P51812 740 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 HNRNPMP52272 730 aaKnown RBP eCLIP6.91□□□□□ -1.3
RFC1-217ENST00000639695 EIF3BP55884 814 aaKnown RBP6.91□□□□□ -1.3
RFC1-217ENST00000639695 CCDC15Q0P6D6 951 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 RABL3Q5HYI8 236 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 RRM2BQ7LG56 351 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 TOR1AIP2Q8NFQ8 470 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 CLEC4CQ8WTT0 213 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 KCNJ9Q92806 393 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 CTHRC1Q96CG8 243 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 ELP4Q96EB1 424 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 PGBD1Q96JS3 809 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 ASB2Q96Q27 587 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 EYA3Q99504 573 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 ALG8Q9BVK2 526 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 TBCCD1Q9NVR7 557 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 NFKBIL1Q9UBC1 381 aaPredicted RBP6.91□□□□□ -1.3
RFC1-217ENST00000639695 RPS6KA6Q9UK32 745 aa6.91□□□□□ -1.3
RFC1-217ENST00000639695 MARCH11A6NNE9 402 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 CCNT1O60563 726 aaKnown RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 DKC1O60832 514 aaKnown RBP eCLIP6.9□□□□□ -1.3
RFC1-217ENST00000639695 NDUFA10O95299 355 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 IL6RP08887 468 aaPredicted RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 COX7A2P14406 83 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 BMP5P22003 454 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 DUSP1P28562 367 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 ABCD1P33897 745 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 MCM5P33992 734 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 CTCFP49711 727 aaPredicted RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 TERF1P54274 439 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 TPTEP56180 551 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 UFM1P61960 85 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 RPL7AP62424 266 aaKnown RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 NEXNQ0ZGT2 675 aa6.9□□□□□ -1.3
RFC1-217ENST00000639695 TOB2Q14106 344 aaPredicted RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 KIAA1324Q6UXG2 1013 aaKnown RBP6.9□□□□□ -1.3
RFC1-217ENST00000639695 PTCHD4Q6ZW05 846 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms