RNA–Protein interactions for RNA: ENST00000639501.1

PMS1-222, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-222ENST00000639501 RNF146Q9NTX7 359 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 CDY2AQ9Y6F7 541 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 CDY1Q9Y6F8 540 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 PALM2-AKAP2B1ALY0 433 aaPredicted RBP20.98■□□□□ 0.95
PMS1-222ENST00000639501 GPR25O00155 361 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 NOP56O00567 594 aaKnown RBP20.98■□□□□ 0.95
PMS1-222ENST00000639501 MSCO60682 206 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 LTFP02788 710 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 CAPNS1P04632 268 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 ERVK-10P10266 1014 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 ZNF26P17031 533 aaPredicted RBP20.98■□□□□ 0.95
PMS1-222ENST00000639501 CYP3A5P20815 502 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 MGAT1P26572 445 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 VARSP26640 1264 aaKnown RBP20.98■□□□□ 0.95
PMS1-222ENST00000639501 ABCG1P45844 678 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 IRF9Q00978 393 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 C16orf89Q6UX73 402 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 TMEM126BQ8IUX1 230 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 NETO2Q8NC67 525 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 CCT7Q99832 543 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 SEMA6AQ9H2E6 1030 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 SNX15Q9NRS6 342 aa20.98■□□□□ 0.95
PMS1-222ENST00000639501 CPSF3Q9UKF6 684 aaKnown RBP20.98■□□□□ 0.95
PMS1-222ENST00000639501 GCATO75600 419 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 ASNSP08243 561 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 PSMC3P17980 439 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 ZSCAN18Q8TBC5 510 aaPredicted RBP20.97■□□□□ 0.95
PMS1-222ENST00000639501 FERMT1Q9BQL6 677 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 SIX4Q9UIU6 781 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 HES2Q9Y543 173 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 ANK1P16157 1881 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 G3V2L1 256 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 ZNF23P17027 643 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 TFE3P19532 575 aaPredicted RBP20.97■□□□□ 0.95
PMS1-222ENST00000639501 FGFR3P22607 806 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 GRM1Q13255 1194 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 SEMA5AQ13591 1074 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 LSM12Q3MHD2 195 aaKnown RBP20.97■□□□□ 0.95
PMS1-222ENST00000639501 POTEHQ6S545 545 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 ERI1Q8IV48 349 aaKnown RBP20.97■□□□□ 0.95
PMS1-222ENST00000639501 NIM1KQ8IY84 436 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 BCO2Q9BYV7 579 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 INO80BQ9C086 356 aaPredicted RBP20.97■□□□□ 0.95
PMS1-222ENST00000639501 TMEM134Q9H6X4 195 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 PADI4Q9UM07 663 aa20.97■□□□□ 0.95
PMS1-222ENST00000639501 TRIP11Q15643 1979 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 PSME4Q14997 1843 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 RGSL1A5PLK6 1076 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 SETSIPP0DME0 302 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 MX2P20592 715 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 CYP2F1P24903 491 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 GTF2A2P52657 109 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 PDK2Q15119 407 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 DLG2Q15700 870 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 MGAT5BQ3V5L5 792 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 KCNT2Q6UVM3 1135 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 LPCAT2Q7L5N7 544 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 CDKL3Q8IVW4 592 aaPredicted RBP20.96■□□□□ 0.95
PMS1-222ENST00000639501 TMEM192Q8IY95 271 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 PDCD6IPQ8WUM4 868 aaKnown RBP20.96■□□□□ 0.95
PMS1-222ENST00000639501 EPS15L1Q9UBC2 864 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 OGTO15294 1046 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 SUPT3HO75486 399 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 P4HA1P13674 534 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 RPL10P27635 214 aaKnown RBP20.96■□□□□ 0.95
PMS1-222ENST00000639501 MLH1P40692 756 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 ENTPD1P49961 510 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 NDST2P52849 883 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 SFSWAPQ12872 951 aaKnown RBP20.96■□□□□ 0.95
PMS1-222ENST00000639501 CBX3Q13185 183 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 IL23RQ5VWK5 629 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 CYS1Q717R9 158 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 ATP6V1E2Q96A05 226 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 ATG4CQ96DT6 458 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 MAML3Q96JK9 1138 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 CEP41Q9BYV8 373 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 VPS33BQ9H267 617 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 WDR41Q9HAD4 459 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 ZNF302Q9NR11 478 aa20.96■□□□□ 0.95
PMS1-222ENST00000639501 ACOT8O14734 319 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 CSPG5O95196 566 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 JUNP05412 331 aaKnown RBP20.95■□□□□ 0.94
PMS1-222ENST00000639501 ALDH3B2P48448 385 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 RGS7P49802 495 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 CDK9P50750 372 aaKnown RBP20.95■□□□□ 0.94
PMS1-222ENST00000639501 ATXN1P54253 815 aaKnown RBP20.95■□□□□ 0.94
PMS1-222ENST00000639501 INSCQ1MX18 579 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 ZPBP2Q6X784 338 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 HACE1Q8IYU2 909 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 DCLK2Q8N568 766 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 CDKL2Q92772 493 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 ZNF668Q96K58 619 aaPredicted RBP20.95■□□□□ 0.94
PMS1-222ENST00000639501 CAB39LQ9H9S4 337 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 SYBUQ9NX95 663 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 MAFBQ9Y5Q3 323 aaPredicted RBP20.95■□□□□ 0.94
PMS1-222ENST00000639501 BCAS2O75934 225 aaPredicted RBP20.95■□□□□ 0.94
PMS1-222ENST00000639501 PDGFRBP09619 1106 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 CDH15P55291 814 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 OLIG2Q13516 323 aa20.95■□□□□ 0.94
PMS1-222ENST00000639501 ZNF667Q5HYK9 610 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms