RNA–Protein interactions for RNA: ENST00000638375.1

HLA-A-209, Transcript of major histocompatibility complex, class I, A, humanhuman

BASIC

Gene HLA-A, Length 975 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-209ENST00000638375 KIAA1549LQ6ZVL6 1849 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 TTC28Q96AY4 2481 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 LRRD1A4D1F6 860 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 C3orf70A6NLC5 250 aaPredicted RBP19.97■□□□□ 0.79
HLA-A-209ENST00000638375 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.97■□□□□ 0.79
HLA-A-209ENST00000638375 PI4K2BG5E9Z4 385 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 H0Y626 953 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 H3BRJ5 948 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 ALADP13716 330 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 CD70P32970 193 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 ARL4AP40617 200 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 HCAR3P49019 387 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 LMAN2Q12907 356 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 MMRN1Q13201 1228 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 DPYSQ14117 519 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 PDK2Q15119 407 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 ZFYVE27Q5T4F4 411 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 FSTL4Q6MZW2 842 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 C1orf228Q6PIY5 440 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 SFTPA1Q8IWL2 248 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 KATNAL2Q8IYT4 538 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 ZNF687Q8N1G0 1237 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.97■□□□□ 0.79
HLA-A-209ENST00000638375 SHDQ96IW2 340 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 CSPG4P5Q96PW8 444 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 ALS2CR12Q96Q35 445 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 ARHGEF4Q9NR80 690 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 ABCB8Q9NUT2 735 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 TMEM248Q9NWD8 314 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 TBC1D30Q9Y2I9 924 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 SLC27A6Q9Y2P4 619 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 PCDHA3Q9Y5H8 950 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 NCOR1O75376 2440 aa19.97■□□□□ 0.79
HLA-A-209ENST00000638375 F5P12259 2224 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.96■□□□□ 0.79
HLA-A-209ENST00000638375 WASH4PA8MWX3 477 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 FGF10O15520 208 aaPredicted RBP19.96■□□□□ 0.79
HLA-A-209ENST00000638375 KAT7O95251 611 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 ERCC2P18074 760 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 PEX5P50542 639 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 ZNF177Q13360 481 aaPredicted RBP19.96■□□□□ 0.79
HLA-A-209ENST00000638375 GEN1Q17RS7 908 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 ZNF852Q6ZMS4 543 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 ANKS1BQ7Z6G8 1248 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 KIAA0907Q7Z7F0 614 aaPredicted RBP19.96■□□□□ 0.79
HLA-A-209ENST00000638375 C17orf53Q8N3J3 647 aaPredicted RBP19.96■□□□□ 0.79
HLA-A-209ENST00000638375 RTL3Q8N8U3 475 aaKnown RBP19.96■□□□□ 0.79
HLA-A-209ENST00000638375 ZNF557Q8N988 423 aaPredicted RBP19.96■□□□□ 0.79
HLA-A-209ENST00000638375 TERB1Q8NA31 727 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 TRIM58Q8NG06 486 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 ALG3Q92685 438 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 FAF2Q96CS3 445 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 ZNF670Q9BS34 389 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 CALN1Q9BXU9 219 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 FOXQ1Q9C009 403 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 CATSPERBQ9H7T0 1116 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 TBC1D17Q9HA65 648 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 LTB4R2Q9NPC1 389 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 KCND1Q9NSA2 647 aa19.96■□□□□ 0.79
HLA-A-209ENST00000638375 RCOR3Q9P2K3 495 aaPredicted RBP19.96■□□□□ 0.79
HLA-A-209ENST00000638375 DOCK4Q8N1I0 1966 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 KANSL1LA0AUZ9 987 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 CCDC66A2RUB6 948 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 PRRT4C9JH25 899 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 TNFRSF10AO00220 468 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 DDX3YO15523 660 aaKnown RBP19.95■□□□□ 0.78
HLA-A-209ENST00000638375 DAPK3O43293 454 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 PDGFBP01127 241 aaPredicted RBP19.95■□□□□ 0.78
HLA-A-209ENST00000638375 EGFP01133 1207 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 PABPC1P11940 636 aaKnown RBP19.95■□□□□ 0.78
HLA-A-209ENST00000638375 AMPD1P23109 780 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 TARSP26639 723 aaKnown RBP19.95■□□□□ 0.78
HLA-A-209ENST00000638375 CSKP41240 450 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 GRIA2P42262 883 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 MAPKAPK2P49137 400 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 HS1BP3Q53T59 392 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 MAP7D3Q8IWC1 876 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 CCDC117Q8IWD4 279 aaPredicted RBP19.95■□□□□ 0.78
HLA-A-209ENST00000638375 SUGP1Q8IWZ8 645 aaKnown RBP19.95■□□□□ 0.78
HLA-A-209ENST00000638375 RNF25Q96BH1 459 aaPredicted RBP19.95■□□□□ 0.78
HLA-A-209ENST00000638375 HES6Q96HZ4 224 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 RETREG1Q9H6L5 497 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 ETNK2Q9NVF9 386 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 DNAI1Q9UI46 699 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 GGA2Q9UJY4 613 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 INTS6Q9UL03 887 aaKnown RBP19.95■□□□□ 0.78
HLA-A-209ENST00000638375 NDRG2Q9UN36 371 aaKnown RBP19.95■□□□□ 0.78
HLA-A-209ENST00000638375 MTF2Q9Y483 593 aaPredicted RBP19.95■□□□□ 0.78
HLA-A-209ENST00000638375 MFHAS1Q9Y4C4 1052 aa19.95■□□□□ 0.78
HLA-A-209ENST00000638375 MIA3Q5JRA6 1907 aa19.94■□□□□ 0.78
HLA-A-209ENST00000638375 TECTAO75443 2155 aa19.94■□□□□ 0.78
HLA-A-209ENST00000638375 A0A0A0MRY4 1105 aa19.94■□□□□ 0.78
HLA-A-209ENST00000638375 GOLGA6L9A6NEM1 432 aa19.94■□□□□ 0.78
HLA-A-209ENST00000638375 ANTXRLA6NF34 631 aa19.94■□□□□ 0.78
HLA-A-209ENST00000638375 MIF4GDA9UHW6 222 aaKnown RBP19.94■□□□□ 0.78
HLA-A-209ENST00000638375 DCLK1O15075 740 aa19.94■□□□□ 0.78
HLA-A-209ENST00000638375 APODP05090 189 aa19.94■□□□□ 0.78
HLA-A-209ENST00000638375 RHOCP08134 193 aa19.94■□□□□ 0.78
HLA-A-209ENST00000638375 MZF1P28698 734 aaPredicted RBP19.94■□□□□ 0.78
HLA-A-209ENST00000638375 OR1E1P30953 314 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms