RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 HS3ST4Q9Y661 456 aa17.3■□□□□ 0.36
CACNA1A-259ENST00000638114 MEI4A8MW99 385 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 PAGE1O75459 146 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 PDGFRAP16234 1089 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 CTSOP43234 321 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 NUMBP49757 651 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 CDR2Q01850 454 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 CENPCQ03188 943 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 DEUP1Q05D60 604 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 AUHQ13825 339 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 PLEKHG6Q3KR16 790 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 ANO6Q4KMQ2 910 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 BRMS1LQ5PSV4 323 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 RNF219Q5W0B1 726 aaPredicted RBP17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 CAVIN1Q6NZI2 390 aaKnown RBP17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 SLC23A3Q6PIS1 610 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 RABEPKQ7Z6M1 372 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 APCDD1Q8J025 514 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 IGSF8Q969P0 613 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 MYO19Q96H55 970 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 MRGPRX3Q96LB0 322 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 TBCBQ99426 244 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 NUP58Q9BVL2 599 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 ADAM33Q9BZ11 813 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 TKTL2Q9H0I9 626 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 SIK2Q9H0K1 926 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 HSD3B7Q9H2F3 369 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 MTG2Q9H4K7 406 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 WDCPQ9H6R7 721 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 ERVW-1Q9UQF0 538 aa17.29■□□□□ 0.36
CACNA1A-259ENST00000638114 LRRC10BA6NIK2 292 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 CDX4O14627 284 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 TM4SF5O14894 197 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 ADCY5O95622 1261 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 F9P00740 461 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 IGLV3-19P01714 112 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 DNTTP04053 509 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 SRPRAP08240 638 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 SERPINF2P08697 491 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 ATP1A3P13637 1013 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 CHRNB2P17787 502 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 ENGP17813 658 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 FLT3P36888 993 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 MAPK8P45983 427 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 CXCR3P49682 368 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 RPS14P62263 151 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 ECT2LQ008S8 904 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 FMO1Q01740 532 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 SLC12A1Q13621 1099 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 HNRNPA1L2Q32P51 320 aaKnown RBP17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 SLC25A52Q3SY17 297 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 WDR45BQ5MNZ6 344 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 DAB2IPQ5VWQ8 1189 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 ZNF776Q68DI1 518 aaPredicted RBP17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 ERGIC2Q96RQ1 377 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 FSCN3Q9NQT6 498 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 SLC6A14Q9UN76 642 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 PAXBP1Q9Y5B6 917 aa17.28■□□□□ 0.36
CACNA1A-259ENST00000638114 TTC34A8MYJ7 566 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 SIN3BO75182 1162 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 CYP1A1P04798 512 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 MAOBP27338 520 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 MZF1P28698 734 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 IRAK1P51617 712 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 OXCT1P55809 520 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 ZBTB16Q05516 673 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 GFPT1Q06210 699 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 UAP1L1Q3KQV9 507 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 CXorf57Q6NSI4 855 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 TRIM72Q6ZMU5 477 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 APTXQ7Z2E3 356 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 C14orf80Q86SX3 495 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 DHX40Q8IX18 779 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 KDM1BQ8NB78 822 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 CADM4Q8NFZ8 388 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 SLC30A5Q8TAD4 765 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 NT5C3BQ969T7 300 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 PGAP3Q96FM1 320 aaPredicted RBP17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 RPL10LQ96L21 214 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 C11orf70Q9BRQ4 267 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 GTPBP2Q9BX10 602 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 METTL5Q9NRN9 209 aaKnown RBP17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 ARHGEF38Q9NXL2 777 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 SUSD2Q9UGT4 822 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 TMEM59LQ9UK28 342 aa17.27■□□□□ 0.36
CACNA1A-259ENST00000638114 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 RNASEH1O60930 286 aaKnown RBP17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 GNSP15586 552 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 MMP8P22894 467 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 NNMTP40261 264 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 STK19P49842 368 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 ATXN3P54252 364 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 ZNF177Q13360 481 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 TTC31Q49AM3 519 aaPredicted RBP17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 DCAF12L1Q5VU92 463 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 TRNP1Q6NT89 227 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 PHLDB2Q86SQ0 1253 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 CFAP57Q96MR6 1250 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 BPIFA3Q9BQP9 254 aa17.26■□□□□ 0.35
CACNA1A-259ENST00000638114 MIR1-1HGQ9H1L0 117 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms