RNA–Protein interactions for RNA: ENST00000637572.1

CHD2-227, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 4,452 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-227ENST00000637572 NRDE2Q9H7Z3 1164 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 TLE6Q9H808 572 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 GOLGA2P5Q9HBQ8 144 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 CHMP2BQ9UQN3 213 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 RPS6KL1Q9Y6S9 549 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 TAF1P21675 1872 aa5.66□□□□□ -1.5
CHD2-227ENST00000637572 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 CBX4O00257 560 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 PIRO00625 290 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 TRDMT1O14717 391 aaKnown RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 NRP1O14786 923 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 PMPCBO75439 489 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 ATP5HO75947 161 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 TMCC1O94876 653 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 ZWINTO95229 277 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 CYP2A6P11509 494 aaPredicted RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 UNGP13051 313 aaPredicted RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 AMPD1P23109 780 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 SLC5A3P53794 718 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 MRPS25P82663 173 aaKnown RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 DUSP4Q13115 394 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 SOWAHAQ2M3V2 549 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 ZNF284Q2VY69 593 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 PARP15Q460N3 678 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 ZC3H12AQ5D1E8 599 aaKnown RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 TRIM67Q6ZTA4 783 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 ACAD11Q709F0 780 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 OTOP2Q7RTS6 562 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 MRPL10Q7Z7H8 261 aaKnown RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 TMEM139Q8IV31 216 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 NUDCD3Q8IVD9 361 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 MCUQ8NE86 351 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 PPP1R13LQ8WUF5 828 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 KCNN1Q92952 543 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 BORCS6Q96GS4 357 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 PPP1R16AQ96I34 528 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 C8orf48Q96LL4 319 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 CPXM1Q96SM3 734 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 PCDHB18PQ96TA0 734 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 TMEM121Q9BTD3 319 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 RETREG1Q9H6L5 497 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 EP300Q09472 2414 aaPredicted RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 hCG_1818297A0A087WSY0 165 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 DNAJC6O75061 913 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 ADH1CP00326 375 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 HOXD8P13378 290 aaPredicted RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 PTPN2P17706 415 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 POLR2EP19388 210 aaKnown RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 MAP4P27816 1152 aaKnown RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 L1CAMP32004 1257 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 MMP13P45452 471 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 DAOAP59103 153 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 USP10Q14694 798 aaKnown RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 TBCCQ15814 346 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 PCSK7Q16549 785 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 TRIM60Q495X7 471 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 TIGD5Q53EQ6 642 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 MPPE1Q53F39 396 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 SPANXN3Q5MJ09 141 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 SLC39A5Q6ZMH5 540 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 TMEM110Q86TL2 294 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 SUGP1Q8IWZ8 645 aaKnown RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 LMNTD2Q8IXW0 634 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 GPATCH11Q8N954 259 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 ATG4AQ8WYN0 398 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 OVCA2Q8WZ82 227 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 ZNF516Q92618 1163 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 NTAN1Q96AB6 310 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 ULK4Q96C45 1275 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 MCRS1Q96EZ8 462 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 C9orf72Q96LT7 481 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 FIZ1Q96SL8 496 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 CORO1BQ9BR76 489 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 CENPKQ9BS16 269 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 SLC4A5Q9BY07 1137 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 ZCCHC2Q9C0B9 1178 aaKnown RBP5.65□□□□□ -1.5
CHD2-227ENST00000637572 IKZF4Q9H2S9 585 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 VCXQ9H320 206 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 PIF1Q9H611 641 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 SYTL2Q9HCH5 934 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 VPS45Q9NRW7 570 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 TXLNGQ9NUQ3 528 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 NDFIP2Q9NV92 336 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 FGFR1OP2Q9NVK5 253 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 CLIC5Q9NZA1 410 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 CRLS1Q9UJA2 301 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 RAB21Q9UL25 225 aa5.65□□□□□ -1.5
CHD2-227ENST00000637572 FAM47DPA6NHR8 397 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 RNF103O00237 685 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 H2AFYO75367 372 aaKnown RBP5.65□□□□□ -1.51
CHD2-227ENST00000637572 FBXO24O75426 580 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 IQCF3P0C7M6 154 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 FGFR1P11362 822 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 RHOQP17081 205 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 SERPINA4P29622 427 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 AKT1P31749 480 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 HOXD13P35453 343 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 MAPKAPK2P49137 400 aa5.65□□□□□ -1.51
CHD2-227ENST00000637572 SNRPD1P62314 119 aaKnown RBP5.65□□□□□ -1.51
CHD2-227ENST00000637572 SMAD3P84022 425 aaKnown RBP5.65□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms