RNA–Protein interactions for RNA: ENST00000637329.1

CLN6-219, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,204 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-219ENST00000637329 PLTPP55058 493 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 SLC7A9P82251 487 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 PPIDQ08752 370 aaKnown RBP15.78■□□□□ 0.12
CLN6-219ENST00000637329 GPS1Q13098 491 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 TRIP13Q15645 432 aaPredicted RBP15.78■□□□□ 0.12
CLN6-219ENST00000637329 RABGAP1LQ5R372 815 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 TTC39BQ5VTQ0 682 aaPredicted RBP15.78■□□□□ 0.12
CLN6-219ENST00000637329 AFMIDQ63HM1 303 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 HIBCHQ6NVY1 386 aaPredicted RBP15.78■□□□□ 0.12
CLN6-219ENST00000637329 RHBDF2Q6PJF5 856 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 GAREM2Q75VX8 874 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 NLRP14Q86W24 1093 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 GLIS1Q8NBF1 620 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 HTR3CQ8WXA8 447 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 PPM1EQ8WY54 764 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 ZFRQ96KR1 1074 aaKnown RBP15.78■□□□□ 0.12
CLN6-219ENST00000637329 CDCA3Q99618 268 aaPredicted RBP15.78■□□□□ 0.12
CLN6-219ENST00000637329 FUT8Q9BYC5 575 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 NKX2-4Q9H2Z4 354 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 ACBD3Q9H3P7 528 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 SLC28A3Q9HAS3 691 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 ANAPC5Q9UJX4 755 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 STOML2Q9UJZ1 356 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 TPX2Q9ULW0 747 aaKnown RBP15.78■□□□□ 0.12
CLN6-219ENST00000637329 ATG2AQ2TAZ0 1938 aa15.78■□□□□ 0.12
CLN6-219ENST00000637329 TRAV19A0A0A6YYK7 116 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 TP73O15350 636 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 EPCAMP16422 314 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 PTPN2P17706 415 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 TACR2P21452 398 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 RPL22P35268 128 aaKnown RBP15.77■□□□□ 0.12
CLN6-219ENST00000637329 GARSP41250 739 aaKnown RBP15.77■□□□□ 0.12
CLN6-219ENST00000637329 MAPKAPK2P49137 400 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 VPS41P49754 854 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 KCNQ1P51787 676 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 NDST2P52849 883 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 ITGA8P53708 1063 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 CASP8Q14790 479 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 SLMAPQ14BN4 828 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 RNASEH2BQ5TBB1 312 aaKnown RBP15.77■□□□□ 0.12
CLN6-219ENST00000637329 RAP1GAP2Q684P5 730 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 NADSYN1Q6IA69 706 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 TMC3Q7Z5M5 1100 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 PPIL6Q8IXY8 311 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 UMODL1-AS1Q8N2C9 162 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 PPP2R3CQ969Q6 453 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 VAT1Q99536 393 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 CORO1BQ9BR76 489 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 KLC2Q9H0B6 622 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 PRDM12Q9H4Q4 367 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 TRPC7Q9HCX4 862 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 VANGL2Q9ULK5 521 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 FARP1Q9Y4F1 1045 aaPredicted RBP15.77■□□□□ 0.12
CLN6-219ENST00000637329 HCFC2Q9Y5Z7 792 aa15.77■□□□□ 0.12
CLN6-219ENST00000637329 HELZP42694 1942 aaKnown RBP15.76■□□□□ 0.11
CLN6-219ENST00000637329 DENND4CQ5VZ89 1909 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 A0A0A0MRY4 1105 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 MAP2K7O14733 419 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 OPHN1O60890 802 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 CSPG5O95196 566 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 MAP3K6O95382 1288 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 FAM153BP0C7A2 387 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 ZSCAN5DPP0CG00 497 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 VAV1P15498 845 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 CORO1AP31146 461 aaKnown RBP15.76■□□□□ 0.11
CLN6-219ENST00000637329 CYP4F8P98187 520 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 GRIN2CQ14957 1233 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 DUSP6Q16828 381 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 FAM153CQ494X1 144 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 ARHGAP15Q53QZ3 475 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 FAM133BQ5BKY9 247 aaKnown RBP15.76■□□□□ 0.11
CLN6-219ENST00000637329 FBXL22Q6P050 247 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 C14orf80Q86SX3 495 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 ARHGAP12Q8IWW6 846 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 HS6ST3Q8IZP7 471 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 ZCCHC9Q8N567 271 aaKnown RBP15.76■□□□□ 0.11
CLN6-219ENST00000637329 ATPAF2Q8N5M1 289 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 FATE1Q969F0 183 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 SPATA13Q96N96 652 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 RPRD1AQ96P16 312 aaPredicted RBP15.76■□□□□ 0.11
CLN6-219ENST00000637329 TSGA13Q96PP4 275 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 FRMD8Q9BZ67 464 aaPredicted RBP15.76■□□□□ 0.11
CLN6-219ENST00000637329 RNF38Q9H0F5 515 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 ATXN3LQ9H3M9 355 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 DZANK1Q9NVP4 752 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 FAM153AQ9UHL3 310 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 LSM7Q9UK45 103 aaKnown RBP15.76■□□□□ 0.11
CLN6-219ENST00000637329 ZNF510Q9Y2H8 683 aa15.76■□□□□ 0.11
CLN6-219ENST00000637329 A0A1W2PRU2 124 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 CHADO15335 359 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 PPFIA2O75334 1257 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 CKMP06732 381 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 MYL4P12829 197 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 ETS1P14921 441 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 HDCP19113 662 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 MAGEA6P43360 314 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 AP1B1Q10567 949 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 PARP15Q460N3 678 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 ADGRF1Q5T601 910 aa15.75■□□□□ 0.11
CLN6-219ENST00000637329 TXNDC8Q6A555 127 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms