RNA–Protein interactions for RNA: ENST00000628646.2

SYNGAP1-207, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5 BASIC

Gene SYNGAP1, Length 4,264 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-207ENST00000628646 TTC25Q96NG3 672 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 FRMD8P1Q9BZ68 369 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 WHRNQ9P202 907 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 CYTH4Q9UIA0 394 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 FARP1Q9Y4F1 1045 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 A0A087WUV0 522 aaPredicted RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 GMNCA6NCL1 334 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 DRD4P21917 467 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 ETFBP38117 255 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 ATXN1P54253 815 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 EPHB1P54762 984 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 AUHQ13825 339 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 HEATR6Q6AI08 1181 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 CASC4Q6P4E1 433 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 RFWD3Q6PCD5 774 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 EPS8L3Q8TE67 593 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 TBC1D31Q96DN5 1066 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 PIWIL1Q96J94 861 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 DDX23Q9BUQ8 820 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 SNRNP25Q9BV90 132 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 VPS37BQ9H9H4 285 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 TDP1Q9NUW8 608 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 ZDHHC7Q9NXF8 308 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 CD207Q9UJ71 328 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 TRIP11Q15643 1979 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 TBC1D3BA6NDS4 549 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 PAGE1O75459 146 aa12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 IQCGQ9H095 443 aaKnown RBP12.8□□□□□ -0.36
SYNGAP1-207ENST00000628646 CBX4O00257 560 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 VIMP08670 466 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 AMPD1P23109 780 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 CENPUQ71F23 418 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 PALM2Q8IXS6 379 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 ZMIZ2Q8NF64 920 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 ERLEC1Q96DZ1 483 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 NMUR1Q9HB89 426 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 EURLQ9NYK6 297 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 GON4LQ3T8J9 2241 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 TBL1XO60907 577 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 MX2P20592 715 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 EIF3EP60228 445 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 ACAP1Q15027 740 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 UCMAQ8WVF2 138 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 MFSD1Q9H3U5 465 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 CCDC134Q9H6E4 229 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 RXFP1Q9HBX9 757 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 PPANQ9NQ55 473 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 DUS2Q9NX74 493 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 CLIC5Q9NZA1 410 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 C2orf78A6NCI8 922 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 NEDD8-MDP1E9PL57 170 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 PPP1R12AO14974 1030 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 KCNQ1P51787 676 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 OGDHQ02218 1023 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 PRPSAP1Q14558 356 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 PDK2Q15119 407 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 SH3PXD2AQ5TCZ1 1133 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 PAQR9Q6ZVX9 377 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 KATNAL2Q8IYT4 538 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 CXorf38Q8TB03 319 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 SPATA17Q96L03 361 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 CDC42EP4Q9H3Q1 356 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 C2CD4BA6NLJ0 364 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 ARHGEF15O94989 841 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 ATF6P18850 670 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 BASP1P80723 227 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 CCNG2Q16589 344 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 OLFML1Q6UWY5 402 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 STRADAQ7RTN6 431 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 HLA-CQ95604 372 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 CABS1Q96KC9 395 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 VN1R3Q9BXE9 311 aa12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 ROPN1BQ9BZX4 212 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 ROPN1Q9HAT0 212 aaPredicted RBP12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 INTS9Q9NV88 658 aaKnown RBP12.79□□□□□ -0.36
SYNGAP1-207ENST00000628646 CENPFP49454 3210 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 ZNF840PA6NDX5 716 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 SMAPO00193 183 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 KRT15P19012 456 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 ADRA1BP35368 520 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 PPM1FP49593 454 aaPredicted RBP12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 AAK1Q2M2I8 961 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 CCDC14Q49A88 953 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 SDE2Q6IQ49 451 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 BTN2A3PQ96KV6 586 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 CRISPLD1Q9H336 500 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 MPP6Q9NZW5 540 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 TBC1D14Q9P2M4 693 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 MAFFQ9ULX9 164 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 PLA2G4CQ9UP65 541 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 FNDC3AQ9Y2H6 1198 aaKnown RBP12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 GDI1P31150 447 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 BMP8BP34820 402 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 RAD51Q06609 339 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 RASIP1Q5U651 963 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 PID1Q7Z2X4 250 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 TCEAL4Q96EI5 215 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 PWWP2AQ96N64 755 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 RAMP2O60895 175 aa12.78□□□□□ -0.36
SYNGAP1-207ENST00000628646 FSBPO95073 299 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms