RNA–Protein interactions for RNA: ENST00000627864.1

MECP2-216, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 3

Gene MECP2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-216ENST00000627864 HTR7P34969 479 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 HCAR3P49019 387 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 ARSEP51690 589 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 ZNF135P52742 658 aaPredicted RBP19.38■□□□□ 0.69
MECP2-216ENST00000627864 STARD6P59095 220 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 PDK2Q15119 407 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 FSCBQ5H9T9 825 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 C1orf228Q6PIY5 440 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 RFX8Q6ZV50 586 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 MAP7D3Q8IWC1 876 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 ZNF557Q8N988 423 aaPredicted RBP19.38■□□□□ 0.69
MECP2-216ENST00000627864 SHROOM3Q8TF72 1996 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 RAPGEF5Q92565 580 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 KRT35Q92764 455 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 ALS2CR12Q96Q35 445 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 CALN1Q9BXU9 219 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 CATSPERBQ9H7T0 1116 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 NEU3Q9UQ49 428 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.38■□□□□ 0.69
MECP2-216ENST00000627864 BDP1A6H8Y1 2624 aa19.38■□□□□ 0.69
MECP2-216ENST00000627864 TTC28Q96AY4 2481 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 TNFRSF10AO00220 468 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 KAT7O95251 611 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 CTNNA2P26232 953 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 OR1E1P30953 314 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 HOXC13P31276 330 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 CD70P32970 193 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 MARCKSL1P49006 195 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 MESP2Q0VG99 397 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 LMAN2Q12907 356 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 MMRN1Q13201 1228 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 DPYSL3Q14195 570 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 PREPLQ4J6C6 727 aaPredicted RBP19.37■□□□□ 0.69
MECP2-216ENST00000627864 PHTF2Q8N3S3 785 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 FAM71BQ8TC56 605 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 RNF25Q96BH1 459 aaPredicted RBP19.37■□□□□ 0.69
MECP2-216ENST00000627864 TRIM44Q96DX7 344 aaPredicted RBP19.37■□□□□ 0.69
MECP2-216ENST00000627864 TBC1D17Q9HA65 648 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 ABCB8Q9NUT2 735 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 TMEM248Q9NWD8 314 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 KIAA1522Q9P206 1035 aaPredicted RBP19.37■□□□□ 0.69
MECP2-216ENST00000627864 DNAI1Q9UI46 699 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 PACSIN2Q9UNF0 486 aaPredicted RBP19.37■□□□□ 0.69
MECP2-216ENST00000627864 MRPS17Q9Y2R5 130 aaKnown RBP19.37■□□□□ 0.69
MECP2-216ENST00000627864 PCDHA3Q9Y5H8 950 aa19.37■□□□□ 0.69
MECP2-216ENST00000627864 KANSL1LA0AUZ9 987 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 CCDC66A2RUB6 948 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 TBC1D3BA6NDS4 549 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 FGF10O15520 208 aaPredicted RBP19.36■□□□□ 0.69
MECP2-216ENST00000627864 RHOCP08134 193 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 ERCC2P18074 760 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 AMPD1P23109 780 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 HLA-FP30511 346 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 CTNNA1P35221 906 aaKnown RBP19.36■□□□□ 0.69
MECP2-216ENST00000627864 GRIA2P42262 883 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 GRSF1Q12849 480 aaKnown RBP eCLIP19.36■□□□□ 0.69
MECP2-216ENST00000627864 UBXN2BQ14CS0 331 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 TMEM196Q5HYL7 178 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 FSTL4Q6MZW2 842 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 CXorf57Q6NSI4 855 aaKnown RBP19.36■□□□□ 0.69
MECP2-216ENST00000627864 NLRP14Q86W24 1093 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 SUGP1Q8IWZ8 645 aaKnown RBP19.36■□□□□ 0.69
MECP2-216ENST00000627864 KATNAL2Q8IYT4 538 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 TRIM58Q8NG06 486 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 TSC1Q92574 1164 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 CSPG4P5Q96PW8 444 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 MFSD1Q9H3U5 465 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 RETREG1Q9H6L5 497 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 ZNF212Q9UDV6 495 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 GGA2Q9UJY4 613 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 TBC1D30Q9Y2I9 924 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 SLC27A6Q9Y2P4 619 aa19.36■□□□□ 0.69
MECP2-216ENST00000627864 NYNRINQ9P2P1 1898 aaKnown RBP19.35■□□□□ 0.69
MECP2-216ENST00000627864 GOLGA6L9A6NEM1 432 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 TMEM221A6NGB7 291 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 MIF4GDA9UHW6 222 aaKnown RBP19.35■□□□□ 0.69
MECP2-216ENST00000627864 M0R296 226 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 EGFP01133 1207 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 PABPC1P11940 636 aaKnown RBP19.35■□□□□ 0.69
MECP2-216ENST00000627864 DRD1P21728 446 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 IL4RP24394 825 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 CSKP41240 450 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 MAPKAPK2P49137 400 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 OXCT1P55809 520 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 DPYSQ14117 519 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 GEN1Q17RS7 908 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 C6orf118Q5T5N4 469 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 RNF219Q5W0B1 726 aaPredicted RBP19.35■□□□□ 0.69
MECP2-216ENST00000627864 NUDT18Q6ZVK8 323 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 ANKS1BQ7Z6G8 1248 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 SETD3Q86TU7 594 aaPredicted RBP19.35■□□□□ 0.69
MECP2-216ENST00000627864 UBL4BQ8N7F7 174 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 RTL3Q8N8U3 475 aaKnown RBP19.35■□□□□ 0.69
MECP2-216ENST00000627864 TERB1Q8NA31 727 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 FLCNQ8NFG4 579 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 OR52K2Q8NGK3 314 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 LMLNQ96KR4 655 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 NELL2Q99435 816 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 FOXQ1Q9C009 403 aa19.35■□□□□ 0.69
MECP2-216ENST00000627864 LTB4R2Q9NPC1 389 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms