RNA–Protein interactions for RNA: ENST00000623342.1

SND1-IT1-201, SND1 intronic transcript 1, humanhuman

BASIC

Gene SND1-IT1, Length 2,481 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1-201ENST00000623342 SH3TC2Q8TF17 1288 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 IRGQQ8WZA9 623 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 EPAS1Q99814 870 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 CPNE1Q99829 537 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 GORASP1Q9BQQ3 440 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 NMUR2Q9GZQ4 415 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 SENP6Q9GZR1 1112 aaPredicted RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 WDCPQ9H6R7 721 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 ZNF395Q9H8N7 513 aaPredicted RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 RNPEPL1Q9HAU8 725 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 CSNK1G1Q9HCP0 422 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 TRHDEQ9UKU6 1024 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 EMCNQ9ULC0 261 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 HBS1LQ9Y450 684 aaKnown RBP8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 PSAT1Q9Y617 370 aa8.53□□□□□ -1.04
SND1-IT1-201ENST00000623342 MYO18AQ92614 2054 aaKnown RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 CASTOR2A6NHX0 329 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 TNPO2O14787 897 aaKnown RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 GPR182O15218 404 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 GYG2O15488 501 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 GSC2O15499 205 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 ZBTB24O43167 697 aaPredicted RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 GSRP00390 522 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 CHRNA1P02708 482 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 ATP5BP06576 529 aaKnown RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 ERVK-10P10266 1014 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 ODC1P11926 461 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 SERPINB6P35237 376 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 GP5P40197 560 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 CXCR3P49682 368 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 AQP5P55064 265 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 IRX4P78413 519 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 CAP1Q01518 475 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 GALNT2Q10471 571 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 UPP1Q16831 310 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 INSCQ1MX18 579 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 HSF5Q4G112 596 aaPredicted RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 TIGD5Q53EQ6 642 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 GRTP1Q5TC63 336 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 MBLAC2Q68D91 279 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 ITPRIPL1Q6GPH6 555 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 GDF6Q6KF10 455 aaPredicted RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 C16orf46Q6P387 395 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 TLDC1Q6P9B6 456 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 CES3Q6UWW8 571 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 CTU1Q7Z7A3 348 aaKnown RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 TTC7BQ86TV6 843 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 RASAL3Q86YV0 1011 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 NPWQ8N729 165 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 NSMCE1Q8WV22 266 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 EDEM1Q92611 657 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 MYLPFQ96A32 169 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 HDAC11Q96DB2 347 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 FCRL3Q96P31 734 aaPredicted RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 AGAP3Q96P47 875 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 SIKE1Q9BRV8 207 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 C20orf27Q9GZN8 174 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 TKTL2Q9H0I9 626 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 GBA3Q9H227 469 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 DENND2DQ9H6A0 471 aaPredicted RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 CASS4Q9NQ75 786 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 BFARQ9NZS9 450 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 VANGL2Q9ULK5 521 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 PLIN3O60664 434 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 DIAPH2O60879 1101 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 USP12O75317 370 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 KITP10721 976 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 GM2AP17900 193 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 CTGFP29279 349 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 CCNG1P51959 295 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 OLIG2Q13516 323 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 FRG1Q14331 258 aaKnown RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 KCTD11Q693B1 232 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 PM20D1Q6GTS8 502 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 CXCL17Q6UXB2 119 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 C4orf50Q6ZRC1 276 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 RINLQ6ZS11 566 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 ZCCHC23Q6ZST2 131 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 MRPL10Q7Z7H8 261 aaKnown RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 METTL23Q86XA0 190 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 DNAAF3Q8N9W5 541 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 SMC1BQ8NDV3 1235 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 TRPV1Q8NER1 839 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 ZNF669Q96BR6 464 aaPredicted RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 RSRC1Q96IZ7 334 aaKnown RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 NUDCD1Q96RS6 583 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 VAT1Q99536 393 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 RTP3Q9BQQ7 232 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 ACBD6Q9BR61 282 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 PAAF1Q9BRP4 392 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 RHOBTB2Q9BYZ6 727 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 YY1AP1Q9H869 796 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 IL1RAPL1Q9NZN1 696 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 ARMCX1Q9P291 453 aa8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 PPARGC1AQ9UBK2 798 aaKnown RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 NKX1-2Q9UD57 310 aaPredicted RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 MARCOQ9UEW3 520 aaPredicted RBP8.52□□□□□ -1.05
SND1-IT1-201ENST00000623342 OR12D3Q9UGF7 316 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms