RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TMEM209Q96SK2 561 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 ZSWIM1Q9BR11 485 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 APOBEC3GQ9HC16 384 aaKnown RBP9.3□□□□□ -0.92
HDAC9-229ENST00000622668 VPS18Q9P253 973 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 ZNHIT2Q9UHR6 403 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 LNPEPQ9UIQ6 1025 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 NFU1Q9UMS0 254 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 HBS1LQ9Y450 684 aaKnown RBP9.3□□□□□ -0.92
HDAC9-229ENST00000622668 PIAS3Q9Y6X2 628 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 CACNB4O00305 520 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-229ENST00000622668 DAB1O75553 588 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 ELFN1P0C7U0 828 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 PIRTP0C851 137 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 ADRA1BP35368 520 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 MAPK8P45983 427 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 LIG3P49916 1009 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 DAOAP59103 153 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 RBBP5Q15291 538 aaKnown RBP9.3□□□□□ -0.92
HDAC9-229ENST00000622668 UGP2Q16851 508 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 MARCH8Q5T0T0 291 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 TAC4Q86UU9 113 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 OR7D4Q8NG98 312 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 USP6NLQ92738 828 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 SHISA4Q96DD7 197 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 IL12RB2Q99665 862 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 CCDC3Q9BQI4 270 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 PIH1D1Q9NWS0 290 aaKnown RBP9.3□□□□□ -0.92
HDAC9-229ENST00000622668 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.3□□□□□ -0.92
HDAC9-229ENST00000622668 HMGXB4Q9UGU5 601 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 MID2Q9UJV3 735 aa9.3□□□□□ -0.92
HDAC9-229ENST00000622668 COLQQ9Y215 455 aaPredicted RBP9.3□□□□□ -0.92
HDAC9-229ENST00000622668 FAM237AA0A1B0GTK4 181 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 RASSF9O75901 435 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 DGKIO75912 1065 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 ASGR2P07307 311 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 CTPS1P17812 591 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 TGM2P21980 687 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 DDX6P26196 483 aaKnown RBP eCLIP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 CASP2P42575 452 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 USP10Q14694 798 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 AARS2Q5JTZ9 985 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 SNAP47Q5SQN1 464 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 C11orf96Q7Z7L8 435 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 OSTM1Q86WC4 334 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 FAM76AQ8TAV0 307 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 TMEM121Q9BTD3 319 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 TAS2R14Q9NYV8 317 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 PKD2L2Q9NZM6 624 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 ZFP37Q9Y6Q3 630 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 DUSP10Q9Y6W6 482 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 USP12O75317 370 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 SRP72O76094 671 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 GOT1P17174 413 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 CD72P21854 359 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 HADHAP40939 763 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 CCT5P48643 541 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 POU5F1Q01860 360 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 SLC25A52Q3SY17 297 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 CLEC20AQ6ZU45 233 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 GLT6D1Q7Z4J2 308 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 COLGALT2Q8IYK4 626 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 TFAP2BQ92481 460 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 TMEM159Q96B96 161 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 SNF8Q96H20 258 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 ELMO2Q96JJ3 720 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 C9orf72Q96LT7 481 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 MLPHQ9BV36 600 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 RABEP2Q9H5N1 569 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 EVLQ9UI08 416 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 AGO1Q9UL18 857 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 HIDE1A8MVS5 230 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 PTGESO14684 152 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 SCAMP1O15126 338 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 PRNPP04156 253 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 PABPC1P11940 636 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 EPB42P16452 691 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 KCNQ1P51787 676 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 AFF1P51825 1210 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 EIF3BP55884 814 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 MFSD7Q6UXD7 560 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 ZNF852Q6ZMS4 543 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 METTL3Q86U44 580 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 SLC13A5Q86YT5 568 aaPredicted RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 FUKQ8N0W3 1084 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 JOSD2Q8TAC2 188 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 SETD7Q8WTS6 366 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 P2RY13Q9BPV8 354 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 SLC13A1Q9BZW2 595 aa9.29□□□□□ -0.92
HDAC9-229ENST00000622668 TDRKHQ9Y2W6 561 aaKnown RBP9.29□□□□□ -0.92
HDAC9-229ENST00000622668 C1orf232A0A0U1RR37 186 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 E2F8A0AVK6 867 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 MAN2B1O00754 1011 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 LRPAP1P30533 357 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ZNF135P52742 658 aaPredicted RBP9.28□□□□□ -0.92
HDAC9-229ENST00000622668 CBX1P83916 185 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 FMO1Q01740 532 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 TAF5Q15542 800 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ANKRD20A8PQ5CZ79 823 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 SLC39A4Q6P5W5 647 aa9.28□□□□□ -0.92
HDAC9-229ENST00000622668 ANKS4BQ8N8V4 417 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms