RNA–Protein interactions for RNA: ENST00000622633.4

LITAF-221, Transcript of lipopolysaccharide induced TNF factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LITAF, Length 2,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-221ENST00000622633 BTBD8Q5XKL5 378 aa12.77□□□□□ -0.37
LITAF-221ENST00000622633 SPATA18Q8TC71 538 aa12.77□□□□□ -0.37
LITAF-221ENST00000622633 TRAPPC12Q8WVT3 735 aa12.77□□□□□ -0.37
LITAF-221ENST00000622633 KLRG1Q96E93 195 aa12.77□□□□□ -0.37
LITAF-221ENST00000622633 OTUD5Q96G74 571 aa12.77□□□□□ -0.37
LITAF-221ENST00000622633 NLRP4Q96MN2 994 aa12.77□□□□□ -0.37
LITAF-221ENST00000622633 SSU72Q9NP77 194 aaKnown RBP12.77□□□□□ -0.37
LITAF-221ENST00000622633 SACM1LQ9NTJ5 587 aa12.77□□□□□ -0.37
LITAF-221ENST00000622633 PLK2Q9NYY3 685 aa12.77□□□□□ -0.37
LITAF-221ENST00000622633 KANSL3Q9P2N6 904 aa12.77□□□□□ -0.37
LITAF-221ENST00000622633 INO80B-WBP1J3KQ70 363 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 PIK3R2O00459 728 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 MED7O43513 233 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 KCNJ13O60928 360 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 MT-ND3P03897 115 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 ELK3P41970 407 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 RAP1GDS1P52306 607 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 ATP1A4Q13733 1029 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 RAB6CQ53S08 254 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 DALRD3Q5D0E6 543 aaKnown RBP12.76□□□□□ -0.37
LITAF-221ENST00000622633 ATF7IP2Q5U623 682 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 DPH6Q7L8W6 267 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 LRRC6Q86X45 466 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 CMASQ8NFW8 434 aaPredicted RBP12.76□□□□□ -0.37
LITAF-221ENST00000622633 FNIP1Q8TF40 1166 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 PLEKHA8Q96JA3 519 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 FRMD8P1Q9BZ68 369 aaPredicted RBP12.76□□□□□ -0.37
LITAF-221ENST00000622633 INO80BQ9C086 356 aaPredicted RBP12.76□□□□□ -0.37
LITAF-221ENST00000622633 RAB6CQ9H0N0 254 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 SMYD3Q9H7B4 428 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 THAP1Q9NVV9 213 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 FETUBQ9UGM5 382 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 RSL24D1Q9UHA3 163 aaKnown RBP12.76□□□□□ -0.37
LITAF-221ENST00000622633 SIX4Q9UIU6 781 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 C2CD2LO14523 706 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 TRUB2O95900 331 aaKnown RBP12.76□□□□□ -0.37
LITAF-221ENST00000622633 CXCL8P10145 99 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 CCDC58Q4VC31 144 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 ZNF667Q5HYK9 610 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 TREML2Q5T2D2 321 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 DARS2Q6PI48 645 aaKnown RBP12.76□□□□□ -0.37
LITAF-221ENST00000622633 MPZL3Q6UWV2 235 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 VPS37AQ8NEZ2 397 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 BORCS5Q969J3 196 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 PAIP1Q9H074 479 aaKnown RBP12.76□□□□□ -0.37
LITAF-221ENST00000622633 MANSC1Q9H8J5 431 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 GPRC5DQ9NZD1 345 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 USP18Q9UMW8 372 aa12.76□□□□□ -0.37
LITAF-221ENST00000622633 SIP14410 1827 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 A0A0G2JND7 137 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 ZBTB42B2RXF5 422 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 APOC4-APOC2K7ER74 178 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 HAT1O14929 419 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 AVILO75366 819 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 RSL1D1O76021 490 aaKnown RBP12.75□□□□□ -0.37
LITAF-221ENST00000622633 MICAL2O94851 1124 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 APOC2P02655 101 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 CLK3P49761 638 aaKnown RBP12.75□□□□□ -0.37
LITAF-221ENST00000622633 RPL26P61254 145 aaKnown RBP12.75□□□□□ -0.37
LITAF-221ENST00000622633 HSPA14Q0VDF9 509 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 FAAP100Q0VG06 881 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 RALGDSQ12967 914 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 MXD4Q14582 209 aaPredicted RBP12.75□□□□□ -0.37
LITAF-221ENST00000622633 CYP2A13Q16696 494 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 CCDC14Q49A88 953 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 NET1Q7Z628 596 aaPredicted RBP12.75□□□□□ -0.37
LITAF-221ENST00000622633 LINC00469Q8N7U9 141 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 SLC4A11Q8NBS3 891 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 UBA3Q8TBC4 463 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 SERAC1Q96JX3 654 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 PSKH2Q96QS6 385 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 PEBP4Q96S96 227 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 ELOVL4Q9GZR5 314 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 R3HDMLQ9H3Y0 253 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 PTPRHQ9HD43 1115 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 PCDHGB4Q9UN71 923 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 PCDHGB5Q9Y5G0 923 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 DOCK1Q14185 1865 aa12.75□□□□□ -0.37
LITAF-221ENST00000622633 TXNDC9O14530 226 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 TM9SF1O15321 606 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 LPXNO60711 386 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 ARIH2O95376 493 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 NFICP08651 508 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 C6orf222P0C671 652 aaPredicted RBP12.74□□□□□ -0.37
LITAF-221ENST00000622633 PROZP22891 400 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 IFNA8P32881 189 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 SLC5A3P53794 718 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 ADAM17P78536 824 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 TSPY1Q01534 308 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 APOFQ13790 326 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 KRT81Q14533 505 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 HSDL1Q3SXM5 330 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 LPCAT4Q643R3 524 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 METTL7BQ6UX53 244 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 RNF111Q6ZNA4 994 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 ADGRG6Q86SQ4 1221 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 C1orf127Q8N9H9 656 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 SGF29Q96ES7 293 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 PANX3Q96QZ0 392 aa12.74□□□□□ -0.37
LITAF-221ENST00000622633 VPS11Q9H270 941 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms