RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 GLT1D1Q96MS3 346 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 ACBD6Q9BR61 282 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 MLPHQ9BV36 600 aaPredicted RBP13.4□□□□□ -0.26
AGAP3-226ENST00000622464 CAB39LQ9H9S4 337 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 KANSL3Q9P2N6 904 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 HAO1Q9UJM8 370 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 PCDHA11Q9Y5I1 949 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 TSC2P49815 1807 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 FBXO21O94952 628 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 SNRPAP09012 282 aaKnown RBP13.4□□□□□ -0.26
AGAP3-226ENST00000622464 SERPINB4P48594 390 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 NEK3P51956 506 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 TSPY1Q01534 308 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 SEMA3BQ13214 749 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 NAA25Q14CX7 972 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 DLG2Q15700 870 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 LACTB2Q53H82 288 aaPredicted RBP13.4□□□□□ -0.26
AGAP3-226ENST00000622464 BTBD8Q5XKL5 378 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 FAM171BQ6P995 826 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 CYB5D1Q6P9G0 228 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 SCD5Q86SK9 330 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 MIB1Q86YT6 1006 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 GPBP1L1Q9HC44 474 aaPredicted RBP13.4□□□□□ -0.26
AGAP3-226ENST00000622464 PTCH2Q9Y6C5 1203 aa13.4□□□□□ -0.26
AGAP3-226ENST00000622464 ZNF623O75123 536 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 PAGE1O75459 146 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 KRT37O76014 449 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 STK10O94804 968 aaKnown RBP13.39□□□□□ -0.27
AGAP3-226ENST00000622464 TPSB2P20231 275 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 PAFAH1B3Q15102 231 aaKnown RBP13.39□□□□□ -0.27
AGAP3-226ENST00000622464 TPSAB1Q15661 275 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 GLB1LQ6UWU2 654 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 RNF180Q86T96 592 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 RASSF3Q86WH2 238 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 CIR1Q86X95 450 aaPredicted RBP13.39□□□□□ -0.27
AGAP3-226ENST00000622464 MCUQ8NE86 351 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 ACVR1CQ8NER5 493 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 CHRAC1Q9NRG0 131 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 TBC1D13Q9NVG8 400 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 TPP1O14773 563 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 PRKCHP24723 683 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 ETV4P43268 484 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 ARL13BQ3SXY8 428 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 TTC7BQ86TV6 843 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 MTDHQ86UE4 582 aaKnown RBP13.39□□□□□ -0.27
AGAP3-226ENST00000622464 ZNF598Q86UK7 904 aaKnown RBP13.39□□□□□ -0.27
AGAP3-226ENST00000622464 TMEM173Q86WV6 379 aaPredicted RBP13.39□□□□□ -0.27
AGAP3-226ENST00000622464 VSIG1Q86XK7 387 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 SH3TC2Q8TF17 1288 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 TBC1D31Q96DN5 1066 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 PKMYT1Q99640 499 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 C20orf27Q9GZN8 174 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 ACTR5Q9H9F9 607 aaPredicted RBP13.39□□□□□ -0.27
AGAP3-226ENST00000622464 BAIAP2L1Q9UHR4 511 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 FAM237BA0A1B0GVD1 139 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 SDR42E2A6NKP2 422 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 SCAMP3O14828 347 aaKnown RBP13.39□□□□□ -0.27
AGAP3-226ENST00000622464 OPHN1O60890 802 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 KRT16P08779 473 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 MAGEA6P43360 314 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 SARNPP82979 210 aaKnown RBP13.39□□□□□ -0.27
AGAP3-226ENST00000622464 TTC16Q8NEE8 873 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 C10orf82Q8WW14 230 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 KLHL29Q96CT2 875 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 CAPNS2Q96L46 248 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 EPAS1Q99814 870 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 TSSK1BQ9BXA7 367 aa13.39□□□□□ -0.27
AGAP3-226ENST00000622464 XAB2Q9HCS7 855 aaKnown RBP13.39□□□□□ -0.27
AGAP3-226ENST00000622464 ARHGAP42A6NI28 874 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 FAM159BA6NKW6 160 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 SMAPO00193 183 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 LYPLA1O75608 230 aaPredicted RBP13.38□□□□□ -0.27
AGAP3-226ENST00000622464 KCNA4P22459 653 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 GLUD2P49448 558 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 CXCR3P49682 368 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 ATN1P54259 1190 aaPredicted RBP13.38□□□□□ -0.27
AGAP3-226ENST00000622464 RPL10AP62906 217 aaKnown RBP13.38□□□□□ -0.27
AGAP3-226ENST00000622464 CHI3L2Q15782 390 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 TCTN1Q2MV58 587 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 HSP90AA5PQ58FG0 334 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 CNTD1Q8N815 330 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 CSNK1G1Q9HCP0 422 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 STARD7Q9NQZ5 370 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 ARMCX1Q9P291 453 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 VANGL2Q9ULK5 521 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 A0A1W2PQ45 241 aaPredicted RBP13.38□□□□□ -0.27
AGAP3-226ENST00000622464 A0A1W2PQY0 241 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 ALDOAP04075 364 aaKnown RBP13.38□□□□□ -0.27
AGAP3-226ENST00000622464 INHAP05111 366 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 GARSP41250 739 aaKnown RBP13.38□□□□□ -0.27
AGAP3-226ENST00000622464 ERFP50548 548 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 SNCBQ16143 134 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 TAF1BQ53T94 588 aaPredicted RBP13.38□□□□□ -0.27
AGAP3-226ENST00000622464 FAM171A1Q5VUB5 890 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 NLRP9Q7RTR0 991 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 ZNF354CQ86Y25 554 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 THEM5Q8N1Q8 247 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 PCSK9Q8NBP7 692 aaKnown RBP13.38□□□□□ -0.27
AGAP3-226ENST00000622464 IPMKQ8NFU5 416 aa13.38□□□□□ -0.27
AGAP3-226ENST00000622464 SCLYQ96I15 445 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms