RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 CKMT2P17540 419 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 SYT1P21579 422 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 TNFRSF8P28908 595 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 TLX1P31314 330 aaPredicted RBP4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 SLC8A1P32418 973 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 ETV5P41161 510 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 PTGER3P43115 390 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 HSD17B4P51659 736 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 ZNF41P51814 821 aaPredicted RBP4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 KRT17Q04695 432 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 PTK2Q05397 1052 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 FADDQ13158 208 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 GRB10Q13322 594 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 SMAD1Q15797 465 aaKnown RBP4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 KYNUQ16719 465 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 SLFN13Q68D06 897 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 NSMFQ6X4W1 530 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 SLC24A5Q71RS6 500 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 KCTD20Q7Z5Y7 419 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 MON1AQ86VX9 555 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 LDHDQ86WU2 507 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 FAM217AQ8IXS0 508 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 LZTR1Q8N653 840 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 FAM156AQ8NDB6 213 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 SYTL5Q8TDW5 730 aaPredicted RBP4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 ATP8B4Q8TF62 1192 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 AZIN2Q96A70 460 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 ALG14Q96F25 216 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 ZSCAN31Q96LW9 406 aaPredicted RBP4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 LRGUKQ96M69 825 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 ANKRD27Q96NW4 1050 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 NOX5Q96PH1 765 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 USP28Q96RU2 1077 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 ORAI2Q96SN7 254 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 SELENOSQ9BQE4 189 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 CUEDC2Q9H467 287 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 PNPLA8Q9NP80 782 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 MTMR10Q9NXD2 777 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 TMOD3Q9NYL9 352 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 VPS51Q9UID3 782 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 MAP4K5Q9Y4K4 846 aa4.2□□□□□ -1.74
UBE2D3-233ENST00000618836 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 SERTM2A0A1B0GWG4 89 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 TYW5A2RUC4 315 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 VWA3AA6NCI4 1184 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 BTN3A1O00481 513 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 MEIS2O14770 477 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 PLD2O14939 933 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 GCNT3O95395 438 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 CSTBP04080 98 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 ARAFP10398 606 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 PDCP20941 246 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 GRNP28799 593 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 SLC5A2P31639 672 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 ARHGDIAP52565 204 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 NLRP11P59045 1033 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 YWHAHQ04917 246 aaPredicted RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 RALGDSQ12967 914 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 ZNF177Q13360 481 aaPredicted RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 USP10Q14694 798 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 TAF12Q16514 161 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 FAM110CQ1W6H9 321 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 FAM76BQ5HYJ3 339 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 ADGRF1Q5T601 910 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 HAUS3Q68CZ6 603 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 CLEC6AQ6EIG7 209 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 CAVIN1Q6NZI2 390 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 KLHDC10Q6PID8 442 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 KIF6Q6ZMV9 814 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 MARK2Q7KZI7 788 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 CTU1Q7Z7A3 348 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 PHLDB2Q86SQ0 1253 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 LINC00518Q8N0U6 118 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 PPM1KQ8N3J5 372 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 TCAIMQ8N3R3 496 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 CPSF7Q8N684 471 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 ZNF527Q8NB42 609 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 GLB1L3Q8NCI6 653 aaPredicted RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 TRPV3Q8NET8 790 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 HTRA1Q92743 480 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 CELF1Q92879 486 aaKnown RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 TRAPPC9Q96Q05 1148 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 NDNQ99608 321 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 RAD9AQ99638 391 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 SLC29A1Q99808 456 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 C1QTNF2Q9BXJ5 285 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 FUT8Q9BYC5 575 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 NIF3L1Q9GZT8 377 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 TWSG1Q9GZX9 223 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 ITGA11Q9UKX5 1188 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 LTBP2Q14767 1821 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 IQCF5A8MTL0 148 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 KPNA7A9QM74 516 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 NT5C1B-RDH14C9J2C7 533 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 GOLGA8KD6RF30 607 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 E9PBE3 544 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 O00370 1275 aa4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 ATXN7O15265 892 aaPredicted RBP4.19□□□□□ -1.74
UBE2D3-233ENST00000618836 GPC4O75487 556 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms