RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 NME5P56597 212 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 GRB10Q13322 594 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 PMS2P3Q13401 168 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 GRIK5Q16478 980 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CCNG2Q16589 344 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 FAM214AQ32MH5 1076 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ZIK1Q3SY52 487 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 AGAP7PQ5VUJ5 663 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 DARS2Q6PI48 645 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 RFX6Q8HWS3 928 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 LRRC47Q8N1G4 583 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 MAP6Q96JE9 813 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 MTMR9Q96QG7 549 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 MXD3Q9BW11 206 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 NAA50Q9GZZ1 169 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 RBM38Q9H0Z9 239 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 PCIF1Q9H4Z3 704 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 DPP3Q9NY33 737 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 PNMA8BQ9ULN7 279 aaPredicted RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 PRPF19Q9UMS4 504 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ORC6Q9Y5N6 252 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 FAM205AQ6ZU69 1335 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CACNA1FO60840 1977 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 TYW5A2RUC4 315 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ISPDA4D126 451 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CYB561D2O14569 222 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 TBC1D4O60343 1298 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CIAO1O76071 339 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 RRM2P31350 389 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 GCLMP48507 274 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 FMO5P49326 533 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CASP4P49662 377 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 EVA1CP58658 441 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ILF2Q12905 390 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 SEMA3AQ14563 771 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 CCDC14Q49A88 953 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 TNFAIP8L3Q5GJ75 292 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 HERC6Q8IVU3 1022 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 C12orf56Q8IXR9 622 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 DDX51Q8N8A6 666 aaKnown RBP eCLIP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 SLC22A8Q8TCC7 542 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ADAMTS16Q8TE57 1224 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 FAR1Q8WVX9 515 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 MSANTD3Q96H12 275 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 NAP1L4Q99733 375 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 NXF1Q9UBU9 619 aaKnown RBP7.55□□□□□ -1.2
PDE6A-205ENST00000617647 BOLA1Q9Y3E2 137 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 ZHX2Q9Y6X8 837 aa7.55□□□□□ -1.2
PDE6A-205ENST00000617647 SULT1C4O75897 302 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 POLR2CP19387 275 aaPredicted RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 FMO4P31512 558 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 SSTR3P32745 418 aaPredicted RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 SLC18A1P54219 525 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TAGLNQ01995 201 aaKnown RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 PPATQ06203 517 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 VWA5B1Q5TIE3 1220 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 STYK1Q6J9G0 422 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 PPIL6Q8IXY8 311 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 FAM109AQ8N4B1 249 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 CBR4Q8N4T8 237 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 FIBCD1Q8N539 461 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 ZNF555Q8NEP9 628 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 OR8H1Q8NGG4 311 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 MCFD2Q8NI22 146 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 MTMR12Q9C0I1 747 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 CPVLQ9H3G5 476 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TCF7L2Q9NQB0 619 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 ZC3H7BQ9UGR2 993 aaKnown RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 B3GNT3Q9Y2A9 372 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 SLC27A5Q9Y2P5 690 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 CORINQ9Y5Q5 1042 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 E5RI56 91 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TRIM24O15164 1050 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 MSI1O43347 362 aaKnown RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TYROBPO43914 113 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TNNC2P02585 160 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 PRKCAP17252 672 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 FASP25445 335 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 PSMA4P25789 261 aaKnown RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 EPHA3P29320 983 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 GARSP41250 739 aaKnown RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 PTPN9P43378 593 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 RACK1P63244 317 aaKnown RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 POU6F2P78424 691 aaPredicted RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 UBE3AQ05086 875 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 CDK18Q07002 472 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TRAF3Q13114 568 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 SELENBP1Q13228 472 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 ALX1Q15699 326 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 DCAF8Q5TAQ9 597 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 GARNL3Q5VVW2 1013 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 FRMD7Q6ZUT3 714 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 SLC26A11Q86WA9 606 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 AMIGO1Q86WK6 493 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 NAT16Q8N8M0 369 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 BANPQ8N9N5 519 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 NSUN6Q8TEA1 469 aaKnown RBP7.54□□□□□ -1.2
PDE6A-205ENST00000617647 TCF12Q99081 682 aa7.54□□□□□ -1.2
PDE6A-205ENST00000617647 KCTD14Q9BQ13 255 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms