RNA–Protein interactions for RNA: ENST00000617596.4

SNAP47-213, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAP47, Length 1,905 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-213ENST00000617596 VSIG1Q86XK7 387 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 ZNF683Q8IZ20 524 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 MMGT1Q8N4V1 131 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 NPWQ8N729 165 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 GPATCH11Q8N954 259 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 MAIP1Q8WWC4 291 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 P3H4Q92791 437 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 CABS1Q96KC9 395 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 C1orf74Q96LT6 269 aa16.75■□□□□ 0.27
SNAP47-213ENST00000617596 RCOR3Q9P2K3 495 aaPredicted RBP16.75■□□□□ 0.27
SNAP47-213ENST00000617596 GOLGA6CA6NDK9 693 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 LEFTY2O00292 366 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 MFSD11O43934 449 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 TSPAN3O60637 253 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 FGF19O95750 216 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 POU2F2P09086 479 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 GOLGA6DP0CG33 693 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 TACR2P21452 398 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 COILP38432 576 aaPredicted RBP16.74■□□□□ 0.27
SNAP47-213ENST00000617596 SLC11A2P49281 568 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 MNAT1P51948 309 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 CYP1B1Q16678 543 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 ALFQ53S48 1182 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 GET4Q7L5D6 327 aaPredicted RBP16.74■□□□□ 0.27
SNAP47-213ENST00000617596 GPR149Q86SP6 731 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 PRUNE1Q86TP1 453 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 LGI2Q8N0V4 545 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 SH3RF2Q8TEC5 729 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 USP13Q92995 863 aaPredicted RBP16.74■□□□□ 0.27
SNAP47-213ENST00000617596 RPRD1AQ96P16 312 aaPredicted RBP16.74■□□□□ 0.27
SNAP47-213ENST00000617596 LRRC19Q9H756 370 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 GOLGA6AQ9NYA3 693 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 ZSCAN5CA6NGD5 496 aaPredicted RBP16.74■□□□□ 0.27
SNAP47-213ENST00000617596 ZNF487B1APH4 448 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 ZNF197O14709 1029 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 TTI1O43156 1089 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 LIASO43766 372 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 OPA1O60313 960 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 SGSHP51688 502 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 CCNG2Q16589 344 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 EMC10Q5UCC4 262 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 Q7L0L9 218 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 CCDC105Q8IYK2 499 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 BHMTQ93088 406 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 TBC1D31Q96DN5 1066 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 CELF6Q96J87 481 aaKnown RBP16.74■□□□□ 0.27
SNAP47-213ENST00000617596 CCDC114Q96M63 670 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 CAPS2Q9BXY5 557 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 DTLQ9NZJ0 730 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 LMCD1Q9NZU5 365 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 STIM2Q9P246 746 aa16.74■□□□□ 0.27
SNAP47-213ENST00000617596 FSHRP23945 695 aa16.73■□□□□ 0.27
SNAP47-213ENST00000617596 HCAR3P49019 387 aa16.73■□□□□ 0.27
SNAP47-213ENST00000617596 NRLP54845 237 aa16.73■□□□□ 0.27
SNAP47-213ENST00000617596 RPS24P62847 133 aaKnown RBP16.73■□□□□ 0.27
SNAP47-213ENST00000617596 C8orf74Q6P047 294 aa16.73■□□□□ 0.27
SNAP47-213ENST00000617596 MICALCLQ6ZW33 695 aa16.73■□□□□ 0.27
SNAP47-213ENST00000617596 ARID3BQ8IVW6 561 aaPredicted RBP16.73■□□□□ 0.27
SNAP47-213ENST00000617596 BBS7Q8IWZ6 715 aa16.73■□□□□ 0.27
SNAP47-213ENST00000617596 ZSCAN18Q8TBC5 510 aaPredicted RBP16.73■□□□□ 0.27
SNAP47-213ENST00000617596 PRICKLE1Q96MT3 831 aaPredicted RBP16.73■□□□□ 0.27
SNAP47-213ENST00000617596 TMEM121Q9BTD3 319 aa16.73■□□□□ 0.27
SNAP47-213ENST00000617596 DMGDHQ9UI17 866 aaKnown RBP16.73■□□□□ 0.27
SNAP47-213ENST00000617596 SH3BP1Q9Y3L3 701 aa16.73■□□□□ 0.27
SNAP47-213ENST00000617596 DENND4CQ5VZ89 1909 aa16.73■□□□□ 0.27
SNAP47-213ENST00000617596 C2orf16Q68DN1 1984 aa16.73■□□□□ 0.27
SNAP47-213ENST00000617596 TMEM265A0A087WTH1 108 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.72■□□□□ 0.27
SNAP47-213ENST00000617596 F5H5T6 163 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 PAPLNO95428 1278 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 TGM2P21980 687 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 CHRNA3P32297 505 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 LTBRP36941 435 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 EIF3EP60228 445 aaKnown RBP16.72■□□□□ 0.27
SNAP47-213ENST00000617596 BYSLQ13895 437 aaKnown RBP16.72■□□□□ 0.27
SNAP47-213ENST00000617596 NOMO1Q15155 1222 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 CCDC70Q6NSX1 233 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 CCNI2Q6ZMN8 369 aaPredicted RBP16.72■□□□□ 0.27
SNAP47-213ENST00000617596 Q6ZNB5 142 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 NPAS3Q8IXF0 933 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 C12orf50Q8NA57 414 aaPredicted RBP16.72■□□□□ 0.27
SNAP47-213ENST00000617596 SLC35B2Q8TB61 432 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 FGF13Q92913 245 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 P2RY11Q96G91 374 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 TRIM51Q9BSJ1 452 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 TDP1Q9NUW8 608 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 ARHGAP26Q9UNA1 814 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 ZNF148Q9UQR1 794 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 AGPSO00116 658 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 CHUKO15111 745 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 RBP3P10745 1247 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 DDX6P26196 483 aaKnown RBP eCLIP16.72■□□□□ 0.277e-8■■■■■ 88.3
SNAP47-213ENST00000617596 HOXC13P31276 330 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 CCT5P48643 541 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 FNTAP49354 379 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 DR1Q01658 176 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 NRG1Q02297 640 aaPredicted RBP16.72■□□□□ 0.27
SNAP47-213ENST00000617596 TRIP13Q15645 432 aaPredicted RBP16.72■□□□□ 0.27
SNAP47-213ENST00000617596 CTC1Q2NKJ3 1217 aa16.72■□□□□ 0.27
SNAP47-213ENST00000617596 ADGRF1Q5T601 910 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms