RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 TXNDC11Q6PKC3 985 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 MFSD7Q6UXD7 560 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 TPRG1Q6ZUI0 275 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 NLRP14Q86W24 1093 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 RALGPS2Q86X27 583 aaPredicted RBP16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 FIBINQ8TAL6 211 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 UBE2Q2Q8WVN8 375 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 ALG3Q92685 438 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 SLC2A11Q9BYW1 496 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 TMEM248Q9NWD8 314 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 DEC1Q9P2X7 70 aa16.07■□□□□ 0.16
PCDHGC3-204ENST00000617222 WASH4PA8MWX3 477 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 FGF10O15520 208 aaPredicted RBP16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 ERCC2P18074 760 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 OR1E1P30953 314 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 DGKGP49619 791 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 GNG11P61952 73 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 KDSRQ06136 332 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 DPYSQ14117 519 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 LLGL1Q15334 1064 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 ANKRD20A8PQ5CZ79 823 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 GRAMD4Q6IC98 578 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 ANKS1BQ7Z6G8 1248 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 CCDC50Q8IVM0 306 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 RTL3Q8N8U3 475 aaKnown RBP16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 EXD1Q8NHP7 514 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 PNKPQ96T60 521 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 P2RY13Q9BPV8 354 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 ZNF670Q9BS34 389 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 FBRSL1Q9HCM7 1045 aaKnown RBP16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 ARHGEF4Q9NR80 690 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 ARHGEF3Q9NR81 526 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 ABCB8Q9NUT2 735 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 NDFIP2Q9NV92 336 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 KIAA1522Q9P206 1035 aaPredicted RBP16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 RCOR3Q9P2K3 495 aaPredicted RBP16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 ZNF212Q9UDV6 495 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 DNAI1Q9UI46 699 aa16.06■□□□□ 0.16
PCDHGC3-204ENST00000617222 KIF26AQ9ULI4 1882 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 UNC80Q8N2C7 3258 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 KRBA1A5PL33 1030 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 SHISA7A6NL88 538 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 MAN2B1O00754 1011 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 ENC1O14682 589 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 RHOCP08134 193 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 PYGMP11217 842 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 CD72P21854 359 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 MSNP26038 577 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 HLA-FP30511 346 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 CD70P32970 193 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 DEKP35659 375 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 EIF2DP41214 584 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 PRKCQQ04759 706 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 MESP2Q0VG99 397 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 LMAN2Q12907 356 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 ZNF211Q13398 564 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 PON2Q15165 354 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 C6orf118Q5T5N4 469 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 CXorf57Q6NSI4 855 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 SPOCD1Q6ZMY3 1216 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 SIX5Q8N196 739 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 ZNF557Q8N988 423 aaPredicted RBP16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 OR52K2Q8NGK3 314 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 PCDH19Q8TAB3 1148 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 FAM3CQ92520 227 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 FAF2Q96CS3 445 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 MSANTD3Q96H12 275 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 RBM41Q96IZ5 413 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 LMLNQ96KR4 655 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 RNF157Q96PX1 679 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 TLR10Q9BXR5 811 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 MAK16Q9BXY0 300 aaKnown RBP16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 RETREG1Q9H6L5 497 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 ETNK2Q9NVF9 386 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 TBC1D30Q9Y2I9 924 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 JRKLQ9Y4A0 524 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 MFHAS1Q9Y4C4 1052 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 MYOFQ9NZM1 2061 aa16.05■□□□□ 0.16
PCDHGC3-204ENST00000617222 DCLK1O15075 740 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 DCXO43602 365 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 APODP05090 189 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 PABPC1P11940 636 aaKnown RBP16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 KRT10P13645 584 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 CSKP41240 450 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 CDKN2BP42772 138 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 MAPKAPK2P49137 400 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 NUMBP49757 651 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 OXCT1P55809 520 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 RNF219Q5W0B1 726 aaPredicted RBP16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 KAZNQ674X7 775 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 AADACL2Q6P093 401 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 SETD3Q86TU7 594 aaPredicted RBP16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 VSIG1Q86XK7 387 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 RFX6Q8HWS3 928 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 PHTF2Q8N3S3 785 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 PQLC3Q8N755 202 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 EDAQ92838 391 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 EXOC4Q96A65 974 aa16.04■□□□□ 0.16
PCDHGC3-204ENST00000617222 SHDQ96IW2 340 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms