RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 ALLCQ8N6M5 410 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 WDR36Q8NI36 951 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 MBOAT7Q96N66 472 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 MTG1Q9BT17 334 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 CHID1Q9BWS9 393 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 POMKQ9H5K3 350 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 KRCC1Q9NPI7 259 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 TIMMDC1Q9NPL8 285 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 PDGFCQ9NRA1 345 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 PIH1D1Q9NWS0 290 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 DYNC1LI2O43237 492 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 ZMPSTE24O75844 475 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 ABCB1P08183 1280 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 FAM86B2P0C5J1 330 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 CCT3P49368 545 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 RPS7P62081 194 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 POLNQ7Z5Q5 900 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 CLNKQ7Z7G1 428 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF605Q86T29 641 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 ZDHHC17Q8IUH5 632 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 OR56A4Q8NGH8 313 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 SPAG4Q9NPE6 437 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 ETNK2Q9NVF9 386 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 CPS1P31327 1500 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 DPPA5A6NC42 116 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 TRIM43BA6NCK2 446 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 RRN3P2A6NIE6 340 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 HDAC3O15379 428 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 RECQL5O94762 991 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 SNRPB2P08579 225 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 HOXB8P17481 243 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 AMPD1P23109 780 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 PSMA3P25788 255 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 SLC12A3P55017 1021 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 TNK2Q07912 1038 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 GPR107Q5VW38 600 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 ADGRA1Q86SQ6 560 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 METTL6Q8TCB7 284 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 CENPIQ92674 756 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 SEPT5Q99719 369 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 KLHL31Q9H511 634 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 PACSIN3Q9UKS6 424 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 BARX2Q9UMQ3 279 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 CLCA2Q9UQC9 943 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 SH3GLB1Q9Y371 365 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 HBS1LQ9Y450 684 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 IDH3BO43837 385 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 C6orf222P0C671 652 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 ITGALP20701 1170 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 GPC1P35052 558 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 RPL22P35268 128 aaKnown RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 MARCKSL1P49006 195 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 MGAT5BQ3V5L5 792 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 CASP12Q6UXS9 341 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 CYP4Z2PQ8N1L4 340 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 PQLC1Q8N2U9 271 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 EZH1Q92800 747 aaPredicted RBP10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 MTMR9Q96QG7 549 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 TSPAN16Q9UKR8 245 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 PTPRMP28827 1452 aa10.86□□□□□ -0.67
CLTCL1-209ENST00000617103 UMODL1Q5DID0 1318 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 GNG14A0A1W2PPG7 69 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 KCNK1O00180 336 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 DNM1LO00429 736 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ALOX15BO15296 676 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 MGRN1O60291 552 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 LBPP18428 481 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 SP100P23497 879 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 KLRK1P26718 216 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 NUP62P37198 522 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ST8SIA6P61647 398 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ZNF177Q13360 481 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 UBAP2LQ14157 1087 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 SPATA20Q8TB22 786 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 TEKT5Q96M29 485 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 KATNAL1Q9BW62 490 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 OSBPL7Q9BZF2 842 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 RMI1Q9H9A7 625 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 NT5MQ9NPB1 228 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ABCB10Q9NRK6 738 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 IL17RBQ9NRM6 502 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ARL8BQ9NVJ2 186 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 EHD3Q9NZN3 535 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 C3orf18Q9UK00 162 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 R3HDM2Q9Y2K5 976 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 SLC25A27O95847 323 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ITGAVP06756 1048 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 PAEPP09466 180 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ACAT1P24752 427 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 GSSP48637 474 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 PLK1P53350 603 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 VPS72Q15906 364 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 GSTCDQ8NEC7 633 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 CAMKK2Q96RR4 588 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 TCF12Q99081 682 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 SMAD5Q99717 465 aaKnown RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 TAS2R13Q9NYV9 303 aa10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 ARIH1Q9Y4X5 557 aaPredicted RBP10.85□□□□□ -0.67
CLTCL1-209ENST00000617103 LOC100506127A0A0U1RQW1 187 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms