RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 VPS52Q8N1B4 723 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ZCCHC9Q8N567 271 aaKnown RBP13.42□□□□□ -0.26
FOXN3-219ENST00000615335 FEZF2Q8TBJ5 459 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 KBTBD7Q8WVZ9 684 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ZNF689Q96CS4 500 aaPredicted RBP13.42□□□□□ -0.26
FOXN3-219ENST00000615335 TMEM176AQ96HP8 235 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 TWNKQ96RR1 684 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 RBM15Q96T37 977 aaKnown RBP eCLIP13.42□□□□□ -0.263e-7■■■□□ 16.2
FOXN3-219ENST00000615335 ZBED2Q9BTP6 218 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 NT5C1AQ9BXI3 368 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 NDE1Q9NXR1 346 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 DMTF1Q9Y222 760 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 VILLO15195 856 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 GYG2O15488 501 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ABHD2P08910 425 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ODC1P11926 461 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 CD19P15391 556 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 TRPC1P48995 793 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 SLC11A1P49279 550 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 AP2B1P63010 937 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 C1QBPQ07021 282 aaKnown RBP13.42□□□□□ -0.26
FOXN3-219ENST00000615335 CD300LGQ6UXG3 332 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ANKS1BQ7Z6G8 1248 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 PRUNE1Q86TP1 453 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 TREML1Q86YW5 311 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 HEXIM2Q96MH2 286 aaKnown RBP13.42□□□□□ -0.26
FOXN3-219ENST00000615335 PRICKLE1Q96MT3 831 aaPredicted RBP13.42□□□□□ -0.26
FOXN3-219ENST00000615335 COLEC11Q9BWP8 271 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ELOVL4Q9GZR5 314 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 PARVAQ9NVD7 372 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 IP6K2Q9UHH9 426 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 ZNHIT2Q9UHR6 403 aa13.42□□□□□ -0.26
FOXN3-219ENST00000615335 SH3PXD2BA1X283 911 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 C2CD2LO14523 706 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 MAGEB3O15480 346 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 GALTP07902 379 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 ANPEPP15144 967 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 LMO2P25791 158 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 BCAR1P56945 870 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 CDC16Q13042 620 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 TMED2Q15363 201 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 ZFYVE27Q5T4F4 411 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 C16orf87Q6PH81 154 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 SLC2A7Q6PXP3 512 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 RCOR2Q8IZ40 523 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 SLC4A11Q8NBS3 891 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 CEP70Q8NHQ1 597 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 C10orf82Q8WW14 230 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 ZNF606Q8WXB4 792 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 CFAP57Q96MR6 1250 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 TMEM175Q9BSA9 504 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 USP29Q9HBJ7 922 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 KLHL11Q9NVR0 708 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 SCHIP1Q9P0W5 487 aaPredicted RBP13.41□□□□□ -0.26
FOXN3-219ENST00000615335 ADAM28Q9UKQ2 775 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 PTPRSQ13332 1948 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 RASA4BC9J798 803 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 TMEM189-UBE2V1I3L0A0 370 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 RASA4O43374 803 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 HCRTO43612 131 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 LIASO43766 372 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 GJB5O95377 273 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 GRIA2P42262 883 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 RELAQ04206 551 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 KRT72Q14CN4 511 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 C6orf163Q5TEZ5 329 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 KAZNQ674X7 775 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 NEPROQ6NW34 567 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 KLHDC10Q6PID8 442 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 RBM44Q6ZP01 1051 aaKnown RBP13.41□□□□□ -0.26
FOXN3-219ENST00000615335 LIMS2Q7Z4I7 341 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 ACOT1Q86TX2 421 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 UNC93AQ86WB7 457 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 TMEM86AQ8N2M4 240 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 HERVK_113Q902F9 699 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 ZFRQ96KR1 1074 aaKnown RBP13.41□□□□□ -0.26
FOXN3-219ENST00000615335 SUSD3Q96L08 255 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 SAYSD1Q9NPB0 183 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 EURLQ9NYK6 297 aa13.41□□□□□ -0.26
FOXN3-219ENST00000615335 PI4K2BG5E9Z4 385 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 M0QZQ0 153 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 DNALI1O14645 258 aaPredicted RBP13.4□□□□□ -0.26
FOXN3-219ENST00000615335 STK10O94804 968 aaKnown RBP13.4□□□□□ -0.26
FOXN3-219ENST00000615335 GSTT2P0CG29 244 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 GSTT2BP0CG30 244 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 KRT10P13645 584 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 WARSP23381 471 aaKnown RBP13.4□□□□□ -0.26
FOXN3-219ENST00000615335 FOXN2P32314 431 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 RAP1GDS1P52306 607 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 CLNKQ7Z7G1 428 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 ADGRG6Q86SQ4 1221 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 METTL23Q86XA0 190 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 SREK1Q8WXA9 508 aaKnown RBP13.4□□□□□ -0.26
FOXN3-219ENST00000615335 MAML1Q92585 1016 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 MTIF3Q9H2K0 278 aaKnown RBP13.4□□□□□ -0.26
FOXN3-219ENST00000615335 CWH43Q9H720 699 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 RC3H2Q9HBD1 1191 aaKnown RBP13.4□□□□□ -0.26
FOXN3-219ENST00000615335 PLK2Q9NYY3 685 aa13.4□□□□□ -0.26
FOXN3-219ENST00000615335 FAF1Q9UNN5 650 aaPredicted RBP13.4□□□□□ -0.26
FOXN3-219ENST00000615335 NME7Q9Y5B8 376 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms