RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 PRELID2Q8N945 189 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 DTWD2Q8NBA8 298 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 SH3RF2Q8TEC5 729 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 ATG4AQ8WYN0 398 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 ATOH1Q92858 354 aaPredicted RBP8.29□□□□□ -1.08
PCDH9-205ENST00000614931 SMARCD2Q92925 531 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 IGSF8Q969P0 613 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 HAUS1Q96CS2 278 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 SHDQ96IW2 340 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 BTN2A3PQ96KV6 586 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 AP1M1Q9BXS5 423 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 KLC2Q9H0B6 622 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 SLITRK6Q9H5Y7 841 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 TRPV4Q9HBA0 871 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 ZFP14Q9HCL3 533 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 RBM12Q9NTZ6 932 aaKnown RBP8.29□□□□□ -1.08
PCDH9-205ENST00000614931 MPP6Q9NZW5 540 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 DLGAP2Q9P1A6 1054 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 SAE1Q9UBE0 346 aaPredicted RBP8.29□□□□□ -1.08
PCDH9-205ENST00000614931 ZNF212Q9UDV6 495 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 OR12D3Q9UGF7 316 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 AGO1Q9UL18 857 aaKnown RBP8.29□□□□□ -1.08
PCDH9-205ENST00000614931 VANGL2Q9ULK5 521 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 SIT1Q9Y3P8 196 aa8.29□□□□□ -1.08
PCDH9-205ENST00000614931 IGLV3-10A0A075B6K4 115 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 KANSL1LA0AUZ9 987 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 ZNF487B1APH4 448 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 PROB1E7EW31 1015 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 H3BRJ5 948 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 RIOK3O14730 519 aaKnown RBP8.28□□□□□ -1.08
PCDH9-205ENST00000614931 MFSD11O43934 449 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 CST8O60676 142 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 CNTN5O94779 1100 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 MAP3K6O95382 1288 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 SLC2A3P11169 496 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 TCF3P15923 654 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 ERCC2P18074 760 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 ARL4AP40617 200 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 NBL1P41271 181 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 VIPR2P41587 438 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 KPNA1P52294 538 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-205ENST00000614931 TPI1P60174 286 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 RPS24P62847 133 aaKnown RBP8.28□□□□□ -1.08
PCDH9-205ENST00000614931 DYNLT1P63172 113 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 SLC10A2Q12908 348 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-205ENST00000614931 MLF2Q15773 248 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-205ENST00000614931 LONRF2Q1L5Z9 754 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 ALFQ53S48 1182 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 FAM182AQ5T1J6 154 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 FBXL22Q6P050 247 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 NLRP14Q86W24 1093 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 VSIG1Q86XK7 387 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 UNC45BQ8IWX7 931 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 BBS7Q8IWZ6 715 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 FAM217AQ8IXS0 508 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 LGI2Q8N0V4 545 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 CCDC33Q8N5R6 958 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 NPWQ8N729 165 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 NOA1Q8NC60 698 aaKnown RBP8.28□□□□□ -1.08
PCDH9-205ENST00000614931 TTC16Q8NEE8 873 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 PJA1Q8NG27 643 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 ZSCAN18Q8TBC5 510 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-205ENST00000614931 LRRN4Q8WUT4 740 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 C1orf54Q8WWF1 131 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 TBC1D31Q96DN5 1066 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 C1orf74Q96LT6 269 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 OSBPL6Q9BZF3 934 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 DCLK3Q9C098 648 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 TDP1Q9NUW8 608 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 NDFIP2Q9NV92 336 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 FAM86C1Q9NVL1 165 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 RCOR3Q9P2K3 495 aaPredicted RBP8.28□□□□□ -1.08
PCDH9-205ENST00000614931 STOML2Q9UJZ1 356 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 ZDBF2Q9HCK1 2354 aa8.28□□□□□ -1.08
PCDH9-205ENST00000614931 SHISA7A6NL88 538 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 DRGXA6NNA5 263 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 SOBPA7XYQ1 873 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 TSPAN3O60637 253 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 DCNP07585 359 aaKnown RBP8.27□□□□□ -1.09
PCDH9-205ENST00000614931 PSMC3P17980 439 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 EPHB2P29323 1055 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 WEE1P30291 646 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 AVPR1AP37288 418 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 HCAR3P49019 387 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 SLC11A2P49281 568 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 HARS2P49590 506 aaKnown RBP8.27□□□□□ -1.09
PCDH9-205ENST00000614931 MRPS25P82663 173 aaKnown RBP8.27□□□□□ -1.09
PCDH9-205ENST00000614931 GBE1Q04446 702 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 TUBB2AQ13885 445 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 GRM2Q14416 872 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 ANGPT1Q15389 498 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 CYP1B1Q16678 543 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 C5orf22Q49AR2 442 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 CCDC181Q5TID7 509 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 TTC27Q6P3X3 843 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 C1orf228Q6PIY5 440 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 VITQ6UXI7 678 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 HTR3DQ70Z44 454 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 B4GALNT4Q76KP1 1039 aa8.27□□□□□ -1.09
PCDH9-205ENST00000614931 MFSD6LQ8IWD5 586 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms