RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 RNF135Q8IUD6 432 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 LRRC43Q8N309 656 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CNTD1Q8N815 330 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 IPMKQ8NFU5 416 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ZNF473Q8WTR7 871 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 IRGQQ8WZA9 623 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 MAML1Q92585 1016 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 IGSF8Q969P0 613 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 AZIN2Q96A70 460 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 NTAN1Q96AB6 310 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ZNF419Q96HQ0 510 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 IGSF21Q96ID5 467 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TTC25Q96NG3 672 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 RPRD1AQ96P16 312 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 SLC9A7Q96T83 725 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CLSTN3Q9BQT9 956 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ZBED2Q9BTP6 218 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 FAM129AQ9BZQ8 928 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CWH43Q9H720 699 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ELAC1Q9H777 363 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 TRPC7Q9HCX4 862 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SYBUQ9NX95 663 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SAGE1Q9NXZ1 904 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 XIRP2A4UGR9 3374 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SZT2Q5T011 3432 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SLC38A8A6NNN8 435 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 KCNU1A8MYU2 1149 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TMEM189-UBE2V1I3L0A0 370 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 PRRG1O14668 218 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TRIM66O15016 1216 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 INPPL1O15357 1258 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CSH1P0DML2 217 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CSH2P0DML3 217 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 HAPLN1P10915 354 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 NEFHP12036 1026 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CHRNA4P43681 627 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 PAPOLAP51003 745 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 IFT88Q13099 833 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 XRCC4Q13426 336 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 PAFAH1B3Q15102 231 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 SLC1A5Q15758 541 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SEPT7Q16181 437 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 MS4A13Q5J8X5 152 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 NUGGCQ68CJ6 796 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 FBXL22Q6P050 247 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ANKS3Q6ZW76 656 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 PDZD4Q76G19 769 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 BZW1Q7L1Q6 419 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 C16orf59Q7L2K0 433 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ANKRD33Q7Z3H0 272 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CHSY1Q86X52 802 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 DENND1CQ8IV53 801 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CRIPAKQ8N1N5 446 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ATPAF2Q8N5M1 289 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SLC25A41Q8N5S1 370 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ST13P5Q8NFI4 369 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 ATXN2LQ8WWM7 1075 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 ATP2A3Q93084 1043 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 WBP2Q969T9 261 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 MFSD3Q96ES6 412 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SERAC1Q96JX3 654 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SIGLEC10Q96LC7 697 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ZNF778Q96MU6 729 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SMC6Q96SB8 1091 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CYTH2Q99418 400 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 FERMT1Q9BQL6 677 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SPON2Q9BUD6 331 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 MRPL9Q9BYD2 267 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 STMN4Q9H169 189 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 SMOC2Q9H3U7 446 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 FBXO44Q9H4M3 255 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 PLAC1Q9HBJ0 212 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TLR8Q9NR97 1041 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 FGFR1OP2Q9NVK5 253 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 RBM22Q9NW64 420 aaKnown RBP eCLIP3.52□□□□□ -1.85
LIG4-205ENST00000614526 NKIRAS1Q9NYS0 192 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SLC17A7Q9P2U7 560 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TBX21Q9UL17 535 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 SCML2Q9UQR0 700 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 C2orf78A6NCI8 922 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 OR6C75A6NL08 312 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TRIM49D1C9J1S8 452 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 EBAG9O00559 213 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 APOEP02649 317 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 MT-ND3P03897 115 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 PYGBP11216 843 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 CCNB1P14635 433 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 GBP2P32456 591 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 ACVRL1P37023 503 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 MLLT6P55198 1093 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 WDR4P57081 412 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 RPS24P62847 133 aaKnown RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 DNAJC3Q13217 504 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 POU6F1Q14863 301 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 PRKD1Q15139 912 aaPredicted RBP3.52□□□□□ -1.85
LIG4-205ENST00000614526 TEX44Q53QW1 395 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 MFSD5Q6N075 450 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TADA2BQ86TJ2 420 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 TRABD2AQ86V40 505 aa3.52□□□□□ -1.85
LIG4-205ENST00000614526 ARHGAP12Q8IWW6 846 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms