RNA–Protein interactions for RNA: ENST00000612404.4

SREK1-216, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best) BASIC

Gene SREK1, Length 2,128 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-216ENST00000612404 CTC1Q2NKJ3 1217 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 JAMLQ86YT9 394 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 BBS7Q8IWZ6 715 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 TP53INP2Q8IXH6 220 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 PRICKLE1Q96MT3 831 aaPredicted RBP18.04■□□□□ 0.48
SREK1-216ENST00000612404 NDFIP2Q9NV92 336 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 DRG1Q9Y295 367 aaKnown RBP18.04■□□□□ 0.48
SREK1-216ENST00000612404 DOCK4Q8N1I0 1966 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 SGK1O00141 431 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 GAS8O95995 478 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 ITGAVP06756 1048 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 RPS24P62847 133 aaKnown RBP18.04■□□□□ 0.48
SREK1-216ENST00000612404 NLRP14Q86W24 1093 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 CCNYQ8ND76 341 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 RSAD2Q8WXG1 361 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 TRIM51Q9BSJ1 452 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 ANKZF1Q9H8Y5 726 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 TMEM248Q9NWD8 314 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 DMGDHQ9UI17 866 aaKnown RBP18.04■□□□□ 0.48
SREK1-216ENST00000612404 NUP205Q92621 2012 aa18.04■□□□□ 0.48
SREK1-216ENST00000612404 E2F8A0AVK6 867 aa18.03■□□□□ 0.48
SREK1-216ENST00000612404 SGSHP51688 502 aa18.03■□□□□ 0.48
SREK1-216ENST00000612404 PDK1Q15118 436 aa18.03■□□□□ 0.48
SREK1-216ENST00000612404 GPR161Q8N6U8 529 aaKnown RBP18.03■□□□□ 0.48
SREK1-216ENST00000612404 RIN3Q8TB24 985 aa18.03■□□□□ 0.48
SREK1-216ENST00000612404 OLFM3Q96PB7 478 aa18.03■□□□□ 0.48
SREK1-216ENST00000612404 S1PR5Q9H228 398 aa18.03■□□□□ 0.48
SREK1-216ENST00000612404 DONSONQ9NYP3 566 aa18.03■□□□□ 0.48
SREK1-216ENST00000612404 PRUNE2Q8WUY3 3088 aa18.03■□□□□ 0.48
SREK1-216ENST00000612404 WASH4PA8MWX3 477 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 DFFAO00273 331 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 IFNB1P01574 187 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 LTBRP36941 435 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 GUCY2DQ02846 1103 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 XRCC4Q13426 336 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 TRIP13Q15645 432 aaPredicted RBP18.02■□□□□ 0.48
SREK1-216ENST00000612404 LZTR1Q8N653 840 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 ALLCQ8N6M5 410 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 FAM71DQ8N9W8 422 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 TFB1MQ8WVM0 346 aaKnown RBP18.02■□□□□ 0.48
SREK1-216ENST00000612404 BHMTQ93088 406 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 PABPC5Q96DU9 382 aaKnown RBP18.02■□□□□ 0.48
SREK1-216ENST00000612404 LGMNQ99538 433 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 TRIM31Q9BZY9 425 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 KLC2Q9H0B6 622 aa18.02■□□□□ 0.48
SREK1-216ENST00000612404 UTP11Q9Y3A2 253 aaKnown RBP18.02■□□□□ 0.48
SREK1-216ENST00000612404 TYW5A2RUC4 315 aaKnown RBP18.02■□□□□ 0.47
SREK1-216ENST00000612404 FAM187AA6NFU0 413 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 ZSCAN5CA6NGD5 496 aaPredicted RBP18.02■□□□□ 0.47
SREK1-216ENST00000612404 PPP1R12AO14974 1030 aaPredicted RBP18.02■□□□□ 0.47
SREK1-216ENST00000612404 OR1E1P30953 314 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 CHKAP35790 457 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 AP1B1Q10567 949 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 C5orf22Q49AR2 442 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 SLC45A4Q5BKX6 768 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 FAM78AQ5JUQ0 283 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 CDKL3Q8IVW4 592 aaPredicted RBP18.02■□□□□ 0.47
SREK1-216ENST00000612404 CELF5Q8N6W0 485 aaKnown RBP18.02■□□□□ 0.47
SREK1-216ENST00000612404 SLCO2A1Q92959 643 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 RIPOR3Q96MK2 946 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 QKIQ96PU8 341 aaKnown RBP eCLIP18.02■□□□□ 0.472e-14■■□□□ 12.1
SREK1-216ENST00000612404 GDE1Q9NZC3 331 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 RAD54BQ9Y620 910 aa18.02■□□□□ 0.47
SREK1-216ENST00000612404 NCAM2O15394 837 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 KCNN4O15554 427 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 RBL1P28749 1068 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 TERF1P54274 439 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 ZNF77Q15935 545 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 PRUNE1Q86TP1 453 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 CCDC89Q8N998 374 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 TDRD5Q8NAT2 981 aaKnown RBP18.01■□□□□ 0.47
SREK1-216ENST00000612404 TMA16Q96EY4 203 aaKnown RBP18.01■□□□□ 0.47
SREK1-216ENST00000612404 EPB41L5Q9HCM4 733 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 ESYT3A0FGR9 886 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 TARSL2A2RTX5 802 aaKnown RBP18.01■□□□□ 0.47
SREK1-216ENST00000612404 HACD1B0YJ81 288 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 TBL1XO60907 577 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 MX2P20592 715 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 VIPR2P41587 438 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 VPS41P49754 854 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 GDF10P55107 478 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 CDH4P55283 916 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 USP4Q13107 963 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 TTC39BQ5VTQ0 682 aaPredicted RBP18.01■□□□□ 0.47
SREK1-216ENST00000612404 HEATR6Q6AI08 1181 aaKnown RBP18.01■□□□□ 0.47
SREK1-216ENST00000612404 TPGS1Q6ZTW0 290 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 ARHGAP12Q8IWW6 846 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 FAM217AQ8IXS0 508 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 HJURPQ8NCD3 748 aaPredicted RBP18.01■□□□□ 0.47
SREK1-216ENST00000612404 SMARCD2Q92925 531 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 ASB16Q96NS5 453 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 PNKPQ96T60 521 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 SLC39A8Q9C0K1 460 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 RAB17Q9H0T7 212 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 ASIC3Q9UHC3 531 aa18.01■□□□□ 0.47
SREK1-216ENST00000612404 UNC80Q8N2C7 3258 aa18■□□□□ 0.47
SREK1-216ENST00000612404 A0A1B0GVM2 712 aa18■□□□□ 0.47
SREK1-216ENST00000612404 BCLAF3A2AJT9 711 aaKnown RBP18■□□□□ 0.47
SREK1-216ENST00000612404 TCAF2A6NFQ2 919 aa18■□□□□ 0.47
SREK1-216ENST00000612404 CLDN11O75508 207 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms