RNA–Protein interactions for RNA: ENST00000611848.1

SMAD4-217, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-217ENST00000611848 ANO4Q32M45 955 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 SLC25A52Q3SY17 297 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 PREPLQ4J6C6 727 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 TPGS1Q6ZTW0 290 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 ZNF564Q8TBZ8 553 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 IFT81Q8WYA0 676 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 ZNF653Q96CK0 615 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 CHFRQ96EP1 664 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 TRIM11Q96F44 468 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 FCRL2Q96LA5 508 aaPredicted RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 XPO6Q96QU8 1125 aaKnown RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 P2RY13Q9BPV8 354 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 DDX50Q9BQ39 737 aaKnown RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 DDX47Q9H0S4 455 aaKnown RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 METTL5Q9NRN9 209 aaKnown RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 DDIT4Q9NX09 232 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 PRDM4Q9UKN5 801 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 NDRG2Q9UN36 371 aaKnown RBP9.13□□□□□ -0.95
SMAD4-217ENST00000611848 PCDHA3Q9Y5H8 950 aa9.13□□□□□ -0.95
SMAD4-217ENST00000611848 CACNA1HO95180 2353 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 TCRBV5S1A1TA0A578 114 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 CCDC66A2RUB6 948 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 C2CD4BA6NLJ0 364 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 GOLGA8KD6RF30 607 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 M0QYT0 321 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 OPA1O60313 960 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 ACSL4O60488 711 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 CYBBP04839 570 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 PDGFRAP16234 1089 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 DRD1P21728 446 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 CTNNA1P35221 906 aaKnown RBP9.12□□□□□ -0.95
SMAD4-217ENST00000611848 FLT3P36888 993 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 HSPA9P38646 679 aaKnown RBP9.12□□□□□ -0.95
SMAD4-217ENST00000611848 SULT1E1P49888 294 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 GALK1P51570 392 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 PITX1P78337 314 aaPredicted RBP9.12□□□□□ -0.95
SMAD4-217ENST00000611848 LRRC32Q14392 662 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 MESDQ14696 234 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 GAB4Q2WGN9 574 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 MPPE1Q53F39 396 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 ZC3H12AQ5D1E8 599 aaKnown RBP9.12□□□□□ -0.95
SMAD4-217ENST00000611848 TMEM196Q5HYL7 178 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 DGKKQ5KSL6 1271 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 DNAJC24Q6P3W2 148 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 TMEM25Q86YD3 366 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 CCDC105Q8IYK2 499 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 ZNF687Q8N1G0 1237 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 SYNPOQ8N3V7 929 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 ATP6V0D2Q8N8Y2 350 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 RXFP2Q8WXD0 754 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 KRT35Q92764 455 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 RNF34Q969K3 372 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 CLDN23Q96B33 292 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 BTN2A3PQ96KV6 586 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 BBS2Q9BXC9 721 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 AMACRQ9UHK6 382 aa9.12□□□□□ -0.95
SMAD4-217ENST00000611848 COL4A3Q01955 1670 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 SYNJ2BP-COX16A0A087WUM0 186 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 GOLGA6L10A0A0M3HER8 536 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 FAM187AA6NFU0 413 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 KCNU1A8MYU2 1149 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 NEDD8-MDP1E9PL57 170 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 ATMINO43313 823 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-217ENST00000611848 PI15O43692 258 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 ENDOD1O94919 500 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 PENKP01210 267 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-217ENST00000611848 CHRNB1P11230 501 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 TYRP14679 529 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 RRM1P23921 792 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 SDC4P31431 198 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 OPRD1P41143 372 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 PTPN9P43378 593 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 RPS9P46781 194 aaKnown RBP9.11□□□□□ -0.95
SMAD4-217ENST00000611848 DEUP1Q05D60 604 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 NME3Q13232 169 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 ZNF211Q13398 564 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-217ENST00000611848 FZD5Q13467 585 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 CCINQ13939 588 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 CYP1B1Q16678 543 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 FBXO43Q4G163 708 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 BRMS1LQ5PSV4 323 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 PLEKHA7Q6IQ23 1121 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 DCUN1D2Q6PH85 259 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 NUDT18Q6ZVK8 323 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 BNIPLQ7Z465 357 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 PHLDB2Q86SQ0 1253 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 ETFBKMTQ8IXQ9 262 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 EMC1Q8N766 993 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 TMA16Q96EY4 203 aaKnown RBP9.11□□□□□ -0.95
SMAD4-217ENST00000611848 TBCBQ99426 244 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 IER2Q9BTL4 223 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 WDCPQ9H6R7 721 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 LMAN1LQ9HAT1 526 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 FAM114A2Q9NRY5 505 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 PARVAQ9NVD7 372 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 COX16Q9P0S2 106 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 DEC1Q9P2X7 70 aa9.11□□□□□ -0.95
SMAD4-217ENST00000611848 CNOT8Q9UFF9 292 aaKnown RBP9.11□□□□□ -0.95
SMAD4-217ENST00000611848 MTF2Q9Y483 593 aaPredicted RBP9.11□□□□□ -0.95
SMAD4-217ENST00000611848 SCINQ9Y6U3 715 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms