RNA–Protein interactions for RNA: ENST00000604306.1

NEDD8-MDP1-203, Transcript of NEDD8-MDP1 readthrough, humanhuman

TSL 5

Gene NEDD8-MDP1, Length 681 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-MDP1-203ENST00000604306 MLNP12872 115 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ETS1P14921 441 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 VAV1P15498 845 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SYN1P17600 705 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CLCN4P51793 760 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ERVK-21P61565 698 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 IFI35P80217 286 aaPredicted RBP12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SARNPP82979 210 aaKnown RBP12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TNK2Q07912 1038 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PARP6Q2NL67 630 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ANO4Q32M45 955 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ANKRD20A2Q5SQ80 823 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ANKRD20A1Q5TYW2 823 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ANKRD20A3Q5VUR7 823 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ARHGEF18Q6ZSZ5 1173 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TMEM150AQ86TG1 271 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MIB1Q86YT6 1006 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ARHGAP12Q8IWW6 846 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CCDC13Q8IYE1 715 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PDIK1LQ8N165 341 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 NPWQ8N729 165 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 POF1BQ8WVV4 589 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 AUTS2Q8WXX7 1259 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 GDAP1L1Q96MZ0 367 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 GCNAQ96QF7 691 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RBM15Q96T37 977 aaKnown RBP eCLIP12.62□□□□□ -0.398e-6■□□□□ 8.4
NEDD8-MDP1-203ENST00000604306 KLF16Q9BXK1 252 aaPredicted RBP12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 LRRC3Q9BY71 257 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 NACA2Q9H009 215 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SIK2Q9H0K1 926 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 EPB41L4BQ9H329 900 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CDC42EP4Q9H3Q1 356 aaKnown RBP12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 XAB2Q9HCS7 855 aaKnown RBP12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 FETUBQ9UGM5 382 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZMYND8Q9ULU4 1186 aaPredicted RBP12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PLAAQ9Y263 795 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZNF510Q9Y2H8 683 aa12.62□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 F5H5T6 163 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RNF103O00237 685 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PSMD3O43242 534 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MOCS2O96007 188 aaPredicted RBP12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 GSTA2P09210 222 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TACR2P21452 398 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CHKAP35790 457 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 GGCXP38435 758 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 IFNAR2P48551 515 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ERVFC1P60507 584 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 BASP1P80723 227 aaKnown RBP12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SLC7A9P82251 487 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 AP1B1Q10567 949 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 WASHC5Q12768 1159 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PARP15Q460N3 678 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RABGAP1LQ5R372 815 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RWDD4Q6NW29 188 aaKnown RBP12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CHST9Q7L1S5 443 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TMC8Q8IU68 726 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 FAM217AQ8IXS0 508 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ATPAF2Q8N5M1 289 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 KIAA1958Q8N8K9 716 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MRPS31Q92665 395 aaKnown RBP12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 LGMNQ99538 433 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RAB6BQ9NRW1 208 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZDHHC7Q9NXF8 308 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZNF212Q9UDV6 495 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 NUDT5Q9UKK9 219 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MFHAS1Q9Y4C4 1052 aa12.61□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 GOLGA6CA6NDK9 693 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ARHGAP42A6NI28 874 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 HMGB1P1B2RPK0 211 aaPredicted RBP12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 H3BNC9 293 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CACNG3O60359 315 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 STC2O76061 302 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TMEM63AO94886 807 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SYF2O95926 243 aaKnown RBP12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TBX18O95935 607 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 IVLP07476 585 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 GOLGA6DP0CG33 693 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SRGAP2BP0DMP2 458 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PTPN3P26045 913 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MAGEA3P43357 314 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MAGEA4P43358 317 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CDH4P55283 916 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RASA2Q15283 850 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TEX44Q53QW1 395 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 DNAJC21Q5F1R6 531 aaKnown RBP12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 PPM1LQ5SGD2 360 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ADGRF1Q5T601 910 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 TMCO4Q5TGY1 634 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 FBXL22Q6P050 247 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ZNF783Q6ZMS7 281 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CHSY1Q86X52 802 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 RIBC1Q8N443 379 aaPredicted RBP12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 CCNYQ8ND76 341 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 MAML1Q92585 1016 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 IL12RB2Q99665 862 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 STMN4Q9H169 189 aaPredicted RBP12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 GBA3Q9H227 469 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 SEMA4AQ9H3S1 761 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 ASAH2Q9NR71 780 aa12.6□□□□□ -0.39
NEDD8-MDP1-203ENST00000604306 HAUS2Q9NVX0 235 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms