RNA–Protein interactions for RNA: ENST00000600868.5

UPF1-211, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-211ENST00000600868 SLC9A4Q6AI14 798 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 AADACL2Q6P093 401 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 RASGEF1CQ8N431 466 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 CPA6Q8N4T0 437 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 RTL3Q8N8U3 475 aaKnown RBP14.77□□□□□ -0.05
UPF1-211ENST00000600868 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.77□□□□□ -0.05
UPF1-211ENST00000600868 COG1Q8WTW3 980 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 P2RY11Q96G91 374 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 ASB2Q96Q27 587 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 BBS2Q9BXC9 721 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 BRD9Q9H8M2 597 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 TRPV5Q9NQA5 729 aa14.77□□□□□ -0.05
UPF1-211ENST00000600868 TTC7AQ9ULT0 858 aaPredicted RBP14.77□□□□□ -0.05
UPF1-211ENST00000600868 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP14.76□□□□□ -0.05
UPF1-211ENST00000600868 APOL1O14791 398 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 CEP104O60308 925 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 TJP3O95049 919 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 LUC7L3O95232 432 aaKnown RBP14.76□□□□□ -0.05
UPF1-211ENST00000600868 ADH5P11766 374 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 TYRP14679 529 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 MAPKAPK2P49137 400 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 TNK2Q07912 1038 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 ZNF177Q13360 481 aaPredicted RBP14.76□□□□□ -0.05
UPF1-211ENST00000600868 PAFAH1B3Q15102 231 aaKnown RBP14.76□□□□□ -0.05
UPF1-211ENST00000600868 BBS12Q6ZW61 710 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 SETD3Q86TU7 594 aaPredicted RBP14.76□□□□□ -0.05
UPF1-211ENST00000600868 CIR1Q86X95 450 aaPredicted RBP14.76□□□□□ -0.05
UPF1-211ENST00000600868 SLC13A5Q86YT5 568 aaPredicted RBP14.76□□□□□ -0.05
UPF1-211ENST00000600868 RFX6Q8HWS3 928 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 LZTR1Q8N653 840 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 ZNF557Q8N988 423 aaPredicted RBP14.76□□□□□ -0.05
UPF1-211ENST00000600868 KIF18AQ8NI77 898 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 HERPUD2Q9BSE4 406 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 HEMGNQ9BXL5 484 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 SLC2A11Q9BYW1 496 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 ETNK2Q9NVF9 386 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 TBC1D30Q9Y2I9 924 aa14.76□□□□□ -0.05
UPF1-211ENST00000600868 OTOL1A6NHN0 477 aaPredicted RBP14.75□□□□□ -0.05
UPF1-211ENST00000600868 NEDD8-MDP1E9PL57 170 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 CST8O60676 142 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 ASGR2P07307 311 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 TGM2P21980 687 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 OR1E1P30953 314 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 ADCY2Q08462 1091 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 KLF1Q13351 362 aaPredicted RBP14.75□□□□□ -0.05
UPF1-211ENST00000600868 TDGQ13569 410 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 LLGL1Q15334 1064 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 GAB4Q2WGN9 574 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 ITPRIPL2Q3MIP1 535 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 C6orf118Q5T5N4 469 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 KAZNQ674X7 775 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 NCBP2-AS2Q69YL0 99 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 TMCO3Q6UWJ1 677 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 TFAP2DQ7Z6R9 452 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 CCDC117Q8IWD4 279 aaPredicted RBP14.75□□□□□ -0.05
UPF1-211ENST00000600868 UMODL1-AS1Q8N2C9 162 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 CARNMT1Q8N4J0 409 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 PLD5Q8N7P1 536 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 FIBINQ8TAL6 211 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 ACTRT1Q8TDG2 376 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 CSGALNACT1Q8TDX6 532 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 ZNF592Q92610 1267 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 BHMTQ93088 406 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 KLC2Q9H0B6 622 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 PLK2Q9NYY3 685 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 GTSE1Q9NYZ3 720 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 RNF14Q9UBS8 474 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 FBXO10Q9UK96 956 aa14.75□□□□□ -0.05
UPF1-211ENST00000600868 MYOFQ9NZM1 2061 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 ILVBLA1L0T0 632 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 H0Y626 953 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 ZNF185O15231 689 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 CACNG3O60359 315 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 SRFP11831 508 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 SERPINB6P35237 376 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 NR2C2P49116 596 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 NDST2P52849 883 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 OXCT1P55809 520 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 YBEYP58557 167 aaPredicted RBP14.74□□□□□ -0.05
UPF1-211ENST00000600868 CDH18Q13634 790 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 TUBB2AQ13885 445 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 AFMIDQ63HM1 303 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 ZNF783Q6ZMS7 281 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 CREG2Q8IUH2 290 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 MFN1Q8IWA4 741 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 ETFBKMTQ8IXQ9 262 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 MAIP1Q8WWC4 291 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 DNASE1L2Q92874 299 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 MS4A14Q96JA4 679 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 XPO6Q96QU8 1125 aaKnown RBP14.74□□□□□ -0.05
UPF1-211ENST00000600868 NAP1L3Q99457 506 aaPredicted RBP14.74□□□□□ -0.05
UPF1-211ENST00000600868 TUBB2BQ9BVA1 445 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 SLC2A4RGQ9NR83 387 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 NDFIP2Q9NV92 336 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 MFHAS1Q9Y4C4 1052 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 RAD54BQ9Y620 910 aa14.74□□□□□ -0.05
UPF1-211ENST00000600868 MYO10Q9HD67 2058 aa14.73□□□□□ -0.05
UPF1-211ENST00000600868 APOC4-APOC2K7ER74 178 aa14.73□□□□□ -0.05
UPF1-211ENST00000600868 PGRMC1O00264 195 aaKnown RBP14.73□□□□□ -0.05
UPF1-211ENST00000600868 APOC2P02655 101 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms