RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 GON4LQ3T8J9 2241 aa16.25■□□□□ 0.19
RPS28-203ENST00000600659 DNAH14Q0VDD8 3507 aa16.25■□□□□ 0.19
RPS28-203ENST00000600659 TYW5A2RUC4 315 aaKnown RBP16.24■□□□□ 0.19
RPS28-203ENST00000600659 DRGXA6NNA5 263 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 TIMM44O43615 452 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 DLDP09622 509 aaKnown RBP16.24■□□□□ 0.19
RPS28-203ENST00000600659 HLA-EP13747 358 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 BCKDHBP21953 392 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 TGM1P22735 817 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 HNRNPH3P31942 346 aaKnown RBP16.24■□□□□ 0.19
RPS28-203ENST00000600659 P2RY2P41231 377 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 CTSOP43234 321 aaPredicted RBP16.24■□□□□ 0.19
RPS28-203ENST00000600659 COPAP53621 1224 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 MAMLD1Q13495 774 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 MAP7D1Q3KQU3 841 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 PLEKHG6Q3KR16 790 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 PITRM1Q5JRX3 1037 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 PRR23BQ6ZRT6 265 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 DCLK2Q8N568 766 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 FAM160A2Q8N612 972 aaPredicted RBP16.24■□□□□ 0.19
RPS28-203ENST00000600659 CCDC185Q8N715 623 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 FRMD1Q8N878 549 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 FAM172AQ8WUF8 416 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 UCMAQ8WVF2 138 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 HMGB4Q8WW32 186 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 C1orf74Q96LT6 269 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 HAPLN3Q96S86 360 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 TRIM7Q9C029 511 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 MKRN2Q9H000 416 aaKnown RBP16.24■□□□□ 0.19
RPS28-203ENST00000600659 SIK2Q9H0K1 926 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 ISCUQ9H1K1 167 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 DUSP15Q9H1R2 295 aaPredicted RBP16.24■□□□□ 0.19
RPS28-203ENST00000600659 TMEM51Q9NW97 253 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 OR51B4Q9Y5P0 310 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 DMXL1Q9Y485 3027 aa16.24■□□□□ 0.19
RPS28-203ENST00000600659 FTLP02792 175 aaPredicted RBP16.23■□□□□ 0.19
RPS28-203ENST00000600659 MZF1P28698 734 aaPredicted RBP16.23■□□□□ 0.19
RPS28-203ENST00000600659 ADRA1BP35368 520 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 ZNF143P52747 638 aaPredicted RBP16.23■□□□□ 0.19
RPS28-203ENST00000600659 PLK5Q496M5 336 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 RABGAP1LQ5R372 815 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 SPECC1LQ69YQ0 1117 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 SARM1Q6SZW1 724 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 SND1Q7KZF4 910 aaKnown RBP eCLIP16.23■□□□□ 0.19
RPS28-203ENST00000600659 GAS2L3Q86XJ1 694 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 ZNF366Q8N895 744 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 RLN3Q8WXF3 142 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 ZC3H10Q96K80 434 aaKnown RBP16.23■□□□□ 0.19
RPS28-203ENST00000600659 MRGPRX1Q96LB2 322 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 KIAA1522Q9P206 1035 aaPredicted RBP16.23■□□□□ 0.19
RPS28-203ENST00000600659 MBD1Q9UIS9 605 aaPredicted RBP16.23■□□□□ 0.19
RPS28-203ENST00000600659 INVSQ9Y283 1065 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 TBC1D30Q9Y2I9 924 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 LUC7L2Q9Y383 392 aaKnown RBP16.23■□□□□ 0.19
RPS28-203ENST00000600659 CEP250Q9BV73 2442 aa16.23■□□□□ 0.19
RPS28-203ENST00000600659 A0A087X0T9 212 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 E9PAM4 449 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 FAM72CH0Y354 149 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 H0Y626 953 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 RTN2O75298 545 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 ALDH1A2O94788 518 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 SERPING1P05155 500 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 FAM228BP0C875 321 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 NUMBP49757 651 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 PLK1P53350 603 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 CDH4P55283 916 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 NRG1Q02297 640 aaPredicted RBP16.22■□□□□ 0.19
RPS28-203ENST00000600659 CAMK2GQ13555 558 aaPredicted RBP16.22■□□□□ 0.19
RPS28-203ENST00000600659 TDRD12Q587J7 1177 aaKnown RBP16.22■□□□□ 0.19
RPS28-203ENST00000600659 FAM72AQ5TYM5 149 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 LAIR1Q6GTX8 287 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 FAM72DQ6L9T8 149 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 PPP1R2P3Q6NXS1 205 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 FAM72BQ86X60 149 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 ARFGAP1Q8N6T3 406 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 RUBCNQ92622 972 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 NTAN1Q96AB6 310 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 DNAJC7Q99615 494 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 RBSNQ9H1K0 784 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 MTG2Q9H4K7 406 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 PARD6AQ9NPB6 346 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 MPP6Q9NZW5 540 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 ADAMTS1Q9UHI8 967 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 PAXBP1Q9Y5B6 917 aa16.22■□□□□ 0.19
RPS28-203ENST00000600659 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.22■□□□□ 0.19
RPS28-203ENST00000600659 CBFA2T2O43439 604 aa16.21■□□□□ 0.19
RPS28-203ENST00000600659 CLDN11O75508 207 aa16.21■□□□□ 0.19
RPS28-203ENST00000600659 POLR2EP19388 210 aaKnown RBP16.21■□□□□ 0.19
RPS28-203ENST00000600659 SCAPQ12770 1279 aa16.21■□□□□ 0.19
RPS28-203ENST00000600659 ASTE1Q2TB18 679 aaPredicted RBP16.21■□□□□ 0.19
RPS28-203ENST00000600659 PMS2CLQ68D20 193 aa16.21■□□□□ 0.19
RPS28-203ENST00000600659 SDE2Q6IQ49 451 aa16.21■□□□□ 0.19
RPS28-203ENST00000600659 SERPINA13PQ6UXR4 307 aa16.21■□□□□ 0.19
RPS28-203ENST00000600659 CEP68Q76N32 757 aa16.21■□□□□ 0.19
RPS28-203ENST00000600659 PSMB7Q99436 277 aa16.21■□□□□ 0.19
RPS28-203ENST00000600659 CNPY3Q9BT09 278 aa16.21■□□□□ 0.19
RPS28-203ENST00000600659 CNOT8Q9UFF9 292 aaKnown RBP16.21■□□□□ 0.19
RPS28-203ENST00000600659 BZW2Q9Y6E2 419 aaKnown RBP16.21■□□□□ 0.19
RPS28-203ENST00000600659 PI4KAP42356 2102 aa16.21■□□□□ 0.19
RPS28-203ENST00000600659 IGHV1OR15-9A0A0B4J2B8 117 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms