RNA–Protein interactions for RNA: ENST00000600310.5

UPF1-209, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-209ENST00000600310 TXNRD3NBQ6F5E7 133 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 ANKS1BQ7Z6G8 1248 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 CCDC26Q8TAB7 109 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 WFIKKN2Q8TEU8 576 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 TBC1D31Q96DN5 1066 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 EPAS1Q99814 870 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 CHRDQ9H2X0 955 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 ABCB8Q9NUT2 735 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 ZNF212Q9UDV6 495 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 GGA2Q9UJY4 613 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 NEU3Q9UQ49 428 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 TBC1D30Q9Y2I9 924 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 STARD13Q9Y3M8 1113 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 DUSP10Q9Y6W6 482 aa19.92■□□□□ 0.78
UPF1-209ENST00000600310 BUB1BO60566 1050 aaPredicted RBP19.91■□□□□ 0.78
UPF1-209ENST00000600310 PTMAP06454 111 aaKnown RBP19.91■□□□□ 0.78
UPF1-209ENST00000600310 RARAP10276 462 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 CHRM1P11229 460 aaPredicted RBP19.91■□□□□ 0.78
UPF1-209ENST00000600310 RHOQP17081 205 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 AVPR2P30518 371 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 CD70P32970 193 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 HTR7P34969 479 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 SSR1P43307 286 aaKnown RBP19.91■□□□□ 0.78
UPF1-209ENST00000600310 ZNF135P52742 658 aaPredicted RBP19.91■□□□□ 0.78
UPF1-209ENST00000600310 OXCT1P55809 520 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 TAS2R40P59535 323 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 EIF4HQ15056 248 aaKnown RBP19.91■□□□□ 0.78
UPF1-209ENST00000600310 SMTNL2Q2TAL5 461 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 KCNT1Q5JUK3 1230 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 CXorf57Q6NSI4 855 aaKnown RBP19.91■□□□□ 0.78
UPF1-209ENST00000600310 RWDD4Q6NW29 188 aaKnown RBP19.91■□□□□ 0.78
UPF1-209ENST00000600310 TPCN2Q8NHX9 752 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 KCNV2Q8TDN2 545 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 IER2Q9BTL4 223 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 ZWILCHQ9H900 591 aa19.91■□□□□ 0.78
UPF1-209ENST00000600310 A0A0U1RQJ8 604 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 TIMM44O43615 452 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 CREB3O43889 395 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 RNF40O75150 1001 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 EPHB2P29323 1055 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 KIR2DL1P43626 348 aaPredicted RBP19.9■□□□□ 0.78
UPF1-209ENST00000600310 MRPS21P82921 87 aaKnown RBP19.9■□□□□ 0.78
UPF1-209ENST00000600310 SLC12A1Q13621 1099 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 DMC1Q14565 340 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 DPYSL2Q16555 572 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 TMEM215Q68D42 235 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 Q6ZS52 159 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 SETD3Q86TU7 594 aaPredicted RBP19.9■□□□□ 0.78
UPF1-209ENST00000600310 ADIPOR2Q86V24 386 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 NLRP14Q86W24 1093 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 AHI1Q8N157 1196 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 USP33Q8TEY7 942 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 ATRIPQ8WXE1 791 aa19.9■□□□□ 0.78
UPF1-209ENST00000600310 KCTD15Q96SI1 283 aaPredicted RBP19.9■□□□□ 0.78
UPF1-209ENST00000600310 ANTXRLA6NF34 631 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 BUB1O43683 1085 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 KRT7P08729 469 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 CCDC175P0C221 793 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 COMTP21964 271 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 PLK1P53350 603 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 TPI1P60174 286 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 GAS6Q14393 721 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 EMC10Q5UCC4 262 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 C11orf63Q6NUN7 778 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 KIAA1549LQ6ZVL6 1849 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 TFAP2DQ7Z6R9 452 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 OR52K2Q8NGK3 314 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 HSPH1Q92598 858 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 PPP1R9BQ96SB3 815 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 CATSPERBQ9H7T0 1116 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.89■□□□□ 0.77
UPF1-209ENST00000600310 TMEM248Q9NWD8 314 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 ELOVL2Q9NXB9 296 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 TRIM10Q9UDY6 481 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 INTS6Q9UL03 887 aaKnown RBP19.89■□□□□ 0.77
UPF1-209ENST00000600310 HCN2Q9UL51 889 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 ALG6Q9Y672 507 aa19.89■□□□□ 0.77
UPF1-209ENST00000600310 WASH4PA8MWX3 477 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 CHURC1-FNTBB4DL54 471 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 EEF2KO00418 725 aaKnown RBP19.88■□□□□ 0.77
UPF1-209ENST00000600310 OR1E1P30953 314 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 CSKP41240 450 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 HCAR3P49019 387 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 MAPKAPK2P49137 400 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 NAP1L1P55209 391 aaKnown RBP19.88■□□□□ 0.77
UPF1-209ENST00000600310 SEC13P55735 322 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 CCDC173Q0VFZ6 552 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 PLEKHG6Q3KR16 790 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 FUT11Q495W5 492 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 HSF5Q4G112 596 aaPredicted RBP19.88■□□□□ 0.77
UPF1-209ENST00000600310 PPP6R3Q5H9R7 873 aaPredicted RBP19.88■□□□□ 0.77
UPF1-209ENST00000600310 C6orf118Q5T5N4 469 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 LRRC38Q5VT99 294 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 MBLAC2Q68D91 279 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 ZNF783Q6ZMS7 281 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 MAMSTRQ6ZN01 415 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 ZNF662Q6ZS27 426 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 POLNQ7Z5Q5 900 aa19.88■□□□□ 0.77
UPF1-209ENST00000600310 RTL3Q8N8U3 475 aaKnown RBP19.88■□□□□ 0.77
UPF1-209ENST00000600310 FAM71BQ8TC56 605 aa19.88■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms